RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RRN3Q9NYV6 651 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TAS2R13Q9NYV9 303 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 NUDT5Q9UKK9 219 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 KCNH1O95259 989 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 IFNGR2P38484 337 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CRY1Q16526 586 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF57Q68EA5 555 aaPredicted RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SH3BP5LQ7L8J4 393 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 GPSM1Q86YR5 675 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 FAM20CQ8IXL6 584 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 DEFB106AQ8N104 65 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CARD9Q9H257 536 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 VPS4BO75351 444 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TUFMP49411 452 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ENO4A6NNW6 628 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TBC1D12O60347 775 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 UQCRBP14927 111 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 NFKB1P19838 968 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ITGAXP20702 1163 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 GPR1P46091 355 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SLC6A3Q01959 620 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 GPAT3Q53EU6 434 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF470Q6ECI4 717 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF621Q6ZSS3 439 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CCDC149Q6ZUS6 474 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 GPC2Q8N158 579 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PROX1Q92786 737 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 NDUFAF1Q9Y375 327 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 NFASCO94856 1347 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 SERPINA4P29622 427 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CRATP43155 626 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CXCL9Q07325 125 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 OASLQ15646 514 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 CCNG2Q16589 344 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PDZK1Q5T2W1 519 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 RAP1GAP2Q684P5 730 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 HEATR4Q86WZ0 1026 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 RERGQ96A58 199 aaPredicted RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PCDHA11Q9Y5I1 949 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 HACD1B0YJ81 288 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PFKPQ01813 784 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 KRR1Q13601 381 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 PLA2G4EQ3MJ16 856 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TCEAL5Q5H9L2 206 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TRIQKQ629K1 86 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF558Q96NG5 402 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 REXO4Q9GZR2 422 aaKnown RBP11.29□□□□□ -0.6
KNOP1-201ENST00000219837 POPDC2Q9HBU9 364 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 UMODL1Q5DID0 1318 aa11.29□□□□□ -0.6
KNOP1-201ENST00000219837 FRMPD1Q5SYB0 1578 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF862O60290 1169 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 SMIM10L2AP0DMW4 78 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 SMIM10L2BP0DMW5 78 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 MRPS6P82932 125 aaKnown RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 CEP68Q76N32 757 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 R3HCC1LQ7Z5L2 792 aaKnown RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 DENND6AQ8IWF6 608 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 BTBD9Q96Q07 612 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 OR6B1O95007 311 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 EPN2O95208 641 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 TSPAN19P0C672 248 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 MYL12AP19105 171 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 ZNHIT3Q15649 155 aaPredicted RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 PAGE2BQ5JRK9 111 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 FAM124AQ86V42 546 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 IZUMO1Q8IYV9 350 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 LRRIQ1Q96JM4 1722 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 MYL12BO14950 172 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 ERN1O75460 977 aaKnown RBP11.28□□□□□ -0.6
KNOP1-201ENST00000219837 EPORP19235 508 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 DGKAP23743 735 aa11.28□□□□□ -0.6
KNOP1-201ENST00000219837 SKP1P63208 163 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms