RNA–Protein interactions for RNA: YKR076W

ECM4, Transcript of Omega class glutathione transferase, yeast

Gene ECM4, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM4	YKR076W	SWI5	P08153	709 aa		5.14	□□□□□ -1.59
ECM4	YKR076W	RPS6A	P0CX37	236 aa	Known RBP	5.14	□□□□□ -1.59
ECM4	YKR076W	RPS6B	P0CX38	236 aa	Predicted RBP	5.14	□□□□□ -1.59
ECM4	YKR076W	KNS1	P32350	737 aa	Predicted RBP	5.14	□□□□□ -1.59
ECM4	YKR076W	NTH2	P35172	780 aa		5.14	□□□□□ -1.59
ECM4	YKR076W	JJJ2	P46997	583 aa		5.14	□□□□□ -1.59
ECM4	YKR076W	ACS2	P52910	683 aa	Known RBP	5.14	□□□□□ -1.59
ECM4	YKR076W	GAS4	Q08271	471 aa		5.14	□□□□□ -1.59
ECM4	YKR076W	MCA1	Q08601	432 aa		5.14	□□□□□ -1.59
ECM4	YKR076W	ECM23	Q02710	187 aa		5.13	□□□□□ -1.59
ECM4	YKR076W	CYT1	P07143	309 aa		5.11	□□□□□ -1.59
ECM4	YKR076W	PDC5	P16467	563 aa	Known RBP	5.11	□□□□□ -1.59
ECM4	YKR076W	PUP1	P25043	261 aa		5.11	□□□□□ -1.59
ECM4	YKR076W	UBP1	P25037	809 aa		5.1	□□□□□ -1.59
ECM4	YKR076W	YOR093C	Q12275	1648 aa		5.1	□□□□□ -1.59
ECM4	YKR076W	STB3	Q12427	513 aa		5.1	□□□□□ -1.59
ECM4	YKR076W	SRB8	P25648	1427 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	MCM1	P11746	286 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	VAN1	P23642	535 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	UBX7	P38349	436 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	PRY1	P47032	299 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	ROM1	P53046	1155 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	YPL034W	Q03083	165 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	YPQ2	Q06328	317 aa		5.09	□□□□□ -1.59
ECM4	YKR076W	SUB2	Q07478	446 aa	Known RBP	5.09	□□□□□ -1.59
ECM4	YKR076W	PDC6	P26263	563 aa	Known RBP	5.08	□□□□□ -1.6
ECM4	YKR076W	SPR3	P41901	512 aa		5.08	□□□□□ -1.6
ECM4	YKR076W	TRS33	Q99394	268 aa		5.08	□□□□□ -1.6
ECM4	YKR076W	RPP1A	P05318	106 aa	Predicted RBP	5.07	□□□□□ -1.6
ECM4	YKR076W	SHM1	P37292	490 aa	Predicted RBP	5.07	□□□□□ -1.6
ECM4	YKR076W	IRC24	P40580	263 aa		5.07	□□□□□ -1.6
ECM4	YKR076W	CWH41	P53008	833 aa		5.07	□□□□□ -1.6
ECM4	YKR076W	ALO1	P54783	526 aa	Known RBP	5.07	□□□□□ -1.6
ECM4	YKR076W	TY1A-DR2	Q03964	440 aa	Known RBP	5.07	□□□□□ -1.6
ECM4	YKR076W	NOB1	Q08444	459 aa	Known RBP	5.07	□□□□□ -1.6
ECM4	YKR076W	PSH1	Q12161	406 aa		5.07	□□□□□ -1.6
ECM4	YKR076W	DNF3	Q12674	1656 aa		5.07	□□□□□ -1.6
ECM4	YKR076W	YSP2	Q06681	1438 aa		5.06	□□□□□ -1.6
ECM4	YKR076W	PUF6	Q04373	656 aa	Known RBP	5.06	□□□□□ -1.6
ECM4	YKR076W	NGR1	P32831	672 aa	Known RBP	5.05	□□□□□ -1.6
ECM4	YKR076W	OMA1	P36163	345 aa		5.05	□□□□□ -1.6
ECM4	YKR076W	BNR1	P40450	1375 aa		5.04	□□□□□ -1.6
ECM4	YKR076W	IKI3	Q06706	1349 aa	Known RBP	5.04	□□□□□ -1.6
ECM4	YKR076W	YTA6	P40328	754 aa		5.04	□□□□□ -1.6
ECM4	YKR076W	YML083C	Q04526	418 aa		5.04	□□□□□ -1.6
ECM4	YKR076W	GCN2	P15442	1659 aa		5.04	□□□□□ -1.6
ECM4	YKR076W	NUP188	P52593	1655 aa	Known RBP	5.04	□□□□□ -1.6
ECM4	YKR076W	SSA1	P10591	642 aa	Known RBP	5.03	□□□□□ -1.6
ECM4	YKR076W	SCD5	P34758	872 aa		5.03	□□□□□ -1.6
ECM4	YKR076W	TPS3	P38426	1054 aa	Known RBP	5.02	□□□□□ -1.61
ECM4	YKR076W	RPL34A	P87262	121 aa	Predicted RBP	5.02	□□□□□ -1.61
ECM4	YKR076W	UTP4	Q06679	776 aa	Known RBP	5.02	□□□□□ -1.61
ECM4	YKR076W	HAP1	P0CE41	1502 aa		5.02	□□□□□ -1.61
ECM4	YKR076W	RPS31	P05759	152 aa	Known RBP	5.01	□□□□□ -1.61
ECM4	YKR076W	PUN1	Q06991	263 aa		5.01	□□□□□ -1.61
ECM4	YKR076W	NHA1	Q99271	985 aa		5.01	□□□□□ -1.61
ECM4	YKR076W	Q0182	Q9ZZW1	134 aa		5.01	□□□□□ -1.61
ECM4	YKR076W	LEU1	P07264	779 aa	Known RBP	5	□□□□□ -1.61
ECM4	YKR076W	SRS2	P12954	1174 aa		5	□□□□□ -1.61
ECM4	YKR076W	MLF3	P32047	452 aa		5	□□□□□ -1.61
ECM4	YKR076W	INP52	P50942	1183 aa		5	□□□□□ -1.61
ECM4	YKR076W	PDR5	P33302	1511 aa	Known RBP	4.99	□□□□□ -1.61
ECM4	YKR076W	HXT5	P38695	592 aa		4.99	□□□□□ -1.61
ECM4	YKR076W	ALD4	P46367	519 aa	Known RBP	4.99	□□□□□ -1.61
ECM4	YKR076W	YNL165W	P53891	406 aa		4.99	□□□□□ -1.61
ECM4	YKR076W	CWC15	Q03772	175 aa	Known RBP	4.99	□□□□□ -1.61
ECM4	YKR076W	SUV3	P32580	737 aa		4.98	□□□□□ -1.61
ECM4	YKR076W	BUD9	P53226	547 aa		4.98	□□□□□ -1.61
ECM4	YKR076W	URN1	Q06525	465 aa	Known RBP	4.98	□□□□□ -1.61
ECM4	YKR076W	VMR1	P38735	1592 aa		4.98	□□□□□ -1.61
ECM4	YKR076W	IML1	P47170	1584 aa		4.97	□□□□□ -1.61
ECM4	YKR076W	RGP1	P16664	663 aa		4.97	□□□□□ -1.61
ECM4	YKR076W	ALG14	P38242	237 aa		4.97	□□□□□ -1.61
ECM4	YKR076W	MSC7	P38694	644 aa		4.97	□□□□□ -1.61
ECM4	YKR076W	FOX2	Q02207	900 aa	Known RBP	4.97	□□□□□ -1.61
ECM4	YKR076W	CAB1	Q04430	367 aa		4.97	□□□□□ -1.61
ECM4	YKR076W	PGM2	P37012	569 aa	Known RBP	4.96	□□□□□ -1.62
ECM4	YKR076W	GEF1	P37020	779 aa		4.96	□□□□□ -1.62
ECM4	YKR076W	HEH2	Q03281	663 aa		4.96	□□□□□ -1.62
ECM4	YKR076W	PNP1	Q05788	311 aa		4.96	□□□□□ -1.62
ECM4	YKR076W	BUD21	Q08492	214 aa	Predicted RBP	4.96	□□□□□ -1.62
ECM4	YKR076W	USO1	P25386	1790 aa		4.96	□□□□□ -1.62
ECM4	YKR076W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.95	□□□□□ -1.62
ECM4	YKR076W	KAP122	P32767	1081 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	RRN6	P32786	894 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	YBR197C	P38306	217 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	YAP3	P38749	330 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	ALD2	P47771	506 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	MTO1	P53070	669 aa		4.95	□□□□□ -1.62
ECM4	YKR076W	MRPL33	P20084	86 aa		4.94	□□□□□ -1.62
ECM4	YKR076W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
ECM4	YKR076W	ISC10	P32645	267 aa		4.94	□□□□□ -1.62
ECM4	YKR076W	SSM4	P40318	1319 aa		4.94	□□□□□ -1.62
ECM4	YKR076W	FUR4	P05316	633 aa	Known RBP	4.93	□□□□□ -1.62
ECM4	YKR076W	DYS1	P38791	387 aa		4.93	□□□□□ -1.62
ECM4	YKR076W	AVT1	P47082	602 aa		4.93	□□□□□ -1.62
ECM4	YKR076W	SAC7	P17121	654 aa		4.92	□□□□□ -1.62
ECM4	YKR076W	VMA3	P25515	160 aa		4.92	□□□□□ -1.62
ECM4	YKR076W	CDC3	P32457	520 aa	Known RBP	4.92	□□□□□ -1.62
ECM4	YKR076W	QDR2	P40474	542 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms