RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
LINC02228-204ENST00000642115 DYNC1I1O14576 645 aa19.51■□□□□ 0.71
LINC02228-204ENST00000642115 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
LINC02228-204ENST00000642115 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
LINC02228-204ENST00000642115 PLCH2O75038 1416 aa19.51■□□□□ 0.71
LINC02228-204ENST00000642115 MTERF4Q7Z6M4 381 aaKnown RBP19.5■□□□□ 0.71
LINC02228-204ENST00000642115 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
LINC02228-204ENST00000642115 DMTNQ08495 405 aa19.5■□□□□ 0.71
LINC02228-204ENST00000642115 SNX21Q969T3 373 aa19.5■□□□□ 0.71
LINC02228-204ENST00000642115 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
LINC02228-204ENST00000642115 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
LINC02228-204ENST00000642115 STK26Q9P289 416 aa19.5■□□□□ 0.71
LINC02228-204ENST00000642115 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
LINC02228-204ENST00000642115 SSFA2P28290 1259 aa19.49■□□□□ 0.71
LINC02228-204ENST00000642115 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
LINC02228-204ENST00000642115 ANKRD45Q5TZF3 282 aa19.48■□□□□ 0.71
LINC02228-204ENST00000642115 GGT6Q6P531 493 aa19.48■□□□□ 0.71
LINC02228-204ENST00000642115 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
LINC02228-204ENST00000642115 PTMSP20962 102 aa19.48■□□□□ 0.71
LINC02228-204ENST00000642115 PDE4CQ08493 712 aa19.48■□□□□ 0.71
LINC02228-204ENST00000642115 PTPRTO14522 1441 aa19.48■□□□□ 0.71
LINC02228-204ENST00000642115 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
LINC02228-204ENST00000642115 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
LINC02228-204ENST00000642115 UTP14CQ5TAP6 766 aaKnown RBP19.47■□□□□ 0.71
LINC02228-204ENST00000642115 TRPM2O94759 1503 aa19.47■□□□□ 0.71
LINC02228-204ENST00000642115 CD2BP2O95400 341 aaKnown RBP19.47■□□□□ 0.71
LINC02228-204ENST00000642115 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
LINC02228-204ENST00000642115 NOS1P29475 1434 aa19.46■□□□□ 0.71
LINC02228-204ENST00000642115 KLHL40Q2TBA0 621 aa19.46■□□□□ 0.71
LINC02228-204ENST00000642115 RBM25P49756 843 aaKnown RBP19.46■□□□□ 0.71
LINC02228-204ENST00000642115 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
LINC02228-204ENST00000642115 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
LINC02228-204ENST00000642115 CCDC27Q2M243 656 aa19.45■□□□□ 0.7
LINC02228-204ENST00000642115 RBSNQ9H1K0 784 aa19.45■□□□□ 0.7
LINC02228-204ENST00000642115 SRPK2P78362 688 aaKnown RBP19.44■□□□□ 0.7
LINC02228-204ENST00000642115 NCLP19338 710 aaKnown RBP19.44■□□□□ 0.7
LINC02228-204ENST00000642115 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
LINC02228-204ENST00000642115 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
LINC02228-204ENST00000642115 PDLIM2Q96JY6 352 aa19.44■□□□□ 0.7
LINC02228-204ENST00000642115 GOLGA6L22H0YM25 854 aa19.43■□□□□ 0.7
LINC02228-204ENST00000642115 JARID2Q92833 1246 aaPredicted RBP19.43■□□□□ 0.7
LINC02228-204ENST00000642115 IBTKQ9P2D0 1353 aaPredicted RBP19.43■□□□□ 0.7
LINC02228-204ENST00000642115 SASS6Q6UVJ0 657 aa19.43■□□□□ 0.7
LINC02228-204ENST00000642115 TRIM35Q9UPQ4 493 aa19.43■□□□□ 0.7
LINC02228-204ENST00000642115 CEP152O94986 1710 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 CHD1LQ86WJ1 897 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 BAG4O95429 457 aaKnown RBP19.42■□□□□ 0.7
LINC02228-204ENST00000642115 FBLN1P23142 703 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 ZNF445P59923 1031 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
LINC02228-204ENST00000642115 ZBTB40Q9NUA8 1239 aa19.42■□□□□ 0.7
LINC02228-204ENST00000642115 CSPP1Q1MSJ5 1256 aa19.41■□□□□ 0.7
LINC02228-204ENST00000642115 KIF2CQ99661 725 aa19.41■□□□□ 0.7
LINC02228-204ENST00000642115 ZSCAN23Q3MJ62 389 aa19.4■□□□□ 0.7
LINC02228-204ENST00000642115 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
LINC02228-204ENST00000642115 ZBTB7CA1YPR0 619 aa19.4■□□□□ 0.7
LINC02228-204ENST00000642115 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
LINC02228-204ENST00000642115 NUCB1Q02818 461 aa19.39■□□□□ 0.7
LINC02228-204ENST00000642115 GAS2L2Q8NHY3 880 aa19.39■□□□□ 0.7
LINC02228-204ENST00000642115 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.69
LINC02228-204ENST00000642115 TSC1Q92574 1164 aa19.39■□□□□ 0.69
LINC02228-204ENST00000642115 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
LINC02228-204ENST00000642115 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
LINC02228-204ENST00000642115 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
LINC02228-204ENST00000642115 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
LINC02228-204ENST00000642115 CBX1P83916 185 aa19.38■□□□□ 0.69
LINC02228-204ENST00000642115 MCTP1Q6DN14 999 aa19.38■□□□□ 0.69
LINC02228-204ENST00000642115 C14orf93Q9H972 538 aaKnown RBP19.38■□□□□ 0.69
LINC02228-204ENST00000642115 K7ELQ4 463 aaPredicted RBP19.37■□□□□ 0.69
LINC02228-204ENST00000642115 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
LINC02228-204ENST00000642115 ABCA6Q8N139 1617 aa19.37■□□□□ 0.69
LINC02228-204ENST00000642115 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
LINC02228-204ENST00000642115 APBB1O00213 710 aa19.36■□□□□ 0.69
LINC02228-204ENST00000642115 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
LINC02228-204ENST00000642115 ABCC1P33527 1531 aa19.36■□□□□ 0.69
LINC02228-204ENST00000642115 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
LINC02228-204ENST00000642115 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
LINC02228-204ENST00000642115 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
LINC02228-204ENST00000642115 HMOX1P09601 288 aa19.34■□□□□ 0.69
LINC02228-204ENST00000642115 KIF16BQ96L93 1317 aa19.34■□□□□ 0.69
LINC02228-204ENST00000642115 CT47B1P0C2W7 299 aaPredicted RBP19.34■□□□□ 0.69
LINC02228-204ENST00000642115 MCM5P33992 734 aa19.34■□□□□ 0.69
LINC02228-204ENST00000642115 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.69
LINC02228-204ENST00000642115 CD109Q6YHK3 1445 aa19.33■□□□□ 0.69
LINC02228-204ENST00000642115 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
LINC02228-204ENST00000642115 ZNF710Q8N1W2 664 aa19.33■□□□□ 0.68
LINC02228-204ENST00000642115 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.68
LINC02228-204ENST00000642115 LMBRD1Q9NUN5 540 aa19.32■□□□□ 0.68
LINC02228-204ENST00000642115 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
LINC02228-204ENST00000642115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.68
LINC02228-204ENST00000642115 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
LINC02228-204ENST00000642115 ATP2B3Q16720 1220 aa19.31■□□□□ 0.68
LINC02228-204ENST00000642115 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
LINC02228-204ENST00000642115 FOXD4L5Q5VV16 416 aaPredicted RBP19.31■□□□□ 0.68
LINC02228-204ENST00000642115 FOXD4L4Q8WXT5 416 aaPredicted RBP19.31■□□□□ 0.68
LINC02228-204ENST00000642115 GTPBP4Q9BZE4 634 aaKnown RBP19.31■□□□□ 0.68
LINC02228-204ENST00000642115 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
LINC02228-204ENST00000642115 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
LINC02228-204ENST00000642115 TSPYL6Q8N831 410 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms