RNA–Protein interactions for RNA: ENST00000640824.1

KCNMA1-290, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-290ENST00000640824 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 FAM83GA6ND36 823 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 POLR3AO14802 1390 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
KCNMA1-290ENST00000640824 ST20-MTHFSA0A0A6YYL1 179 aa12.37□□□□□ -0.43
KCNMA1-290ENST00000640824 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
KCNMA1-290ENST00000640824 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
KCNMA1-290ENST00000640824 ABTB2Q8N961 1025 aa12.36□□□□□ -0.43
KCNMA1-290ENST00000640824 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-290ENST00000640824 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
KCNMA1-290ENST00000640824 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
KCNMA1-290ENST00000640824 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
KCNMA1-290ENST00000640824 TOPAZ1Q8N9V7 1692 aa12.34□□□□□ -0.43
KCNMA1-290ENST00000640824 ALS2Q96Q42 1657 aa12.34□□□□□ -0.43
KCNMA1-290ENST00000640824 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-290ENST00000640824 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-290ENST00000640824 ATRNO75882 1429 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 TESK2Q96S53 571 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 BTG4Q9NY30 223 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 SLIT2O94813 1529 aa12.32□□□□□ -0.44
KCNMA1-290ENST00000640824 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
KCNMA1-290ENST00000640824 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
KCNMA1-290ENST00000640824 NLRP6P59044 892 aa12.31□□□□□ -0.44
KCNMA1-290ENST00000640824 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-290ENST00000640824 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-290ENST00000640824 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 GCP02774 474 aa12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 CHRNA2Q15822 529 aa12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 VPS72Q15906 364 aa12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
KCNMA1-290ENST00000640824 USP6P35125 1406 aa12.29□□□□□ -0.44
KCNMA1-290ENST00000640824 CDK12Q9NYV4 1490 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-290ENST00000640824 KTN1Q86UP2 1357 aaKnown RBP12.29□□□□□ -0.44
KCNMA1-290ENST00000640824 ABCA3Q99758 1704 aa12.28□□□□□ -0.44
KCNMA1-290ENST00000640824 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-290ENST00000640824 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
KCNMA1-290ENST00000640824 USP47Q96K76 1375 aa12.28□□□□□ -0.44
KCNMA1-290ENST00000640824 SSH2Q76I76 1423 aa12.28□□□□□ -0.44
KCNMA1-290ENST00000640824 EVA1CP58658 441 aa12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 TMF1P82094 1093 aa12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 RGS12O14924 1447 aa12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.45
KCNMA1-290ENST00000640824 ZBTB7CA1YPR0 619 aa12.26□□□□□ -0.45
KCNMA1-290ENST00000640824 STRN4Q9NRL3 753 aa12.26□□□□□ -0.45
KCNMA1-290ENST00000640824 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
KCNMA1-290ENST00000640824 USP19O94966 1318 aa12.26□□□□□ -0.45
KCNMA1-290ENST00000640824 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
KCNMA1-290ENST00000640824 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 COL14A1Q05707 1796 aaKnown RBP12.25□□□□□ -0.45
KCNMA1-290ENST00000640824 PLCH1Q4KWH8 1693 aa12.24□□□□□ -0.45
KCNMA1-290ENST00000640824 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.24□□□□□ -0.45
KCNMA1-290ENST00000640824 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 SOX12O15370 315 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 NME9Q86XW9 330 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 KCNH5Q8NCM2 988 aa12.23□□□□□ -0.45
KCNMA1-290ENST00000640824 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
KCNMA1-290ENST00000640824 GLI3P10071 1580 aa12.22□□□□□ -0.45
KCNMA1-290ENST00000640824 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
KCNMA1-290ENST00000640824 CPDO75976 1380 aa12.22□□□□□ -0.45
KCNMA1-290ENST00000640824 A0A0G2JS52 829 aa12.21□□□□□ -0.45
KCNMA1-290ENST00000640824 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.45
KCNMA1-290ENST00000640824 MYT1Q01538 1121 aa12.21□□□□□ -0.45
KCNMA1-290ENST00000640824 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
KCNMA1-290ENST00000640824 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
KCNMA1-290ENST00000640824 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 PIK3C2AO00443 1686 aa12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
KCNMA1-290ENST00000640824 CAMTA1Q9Y6Y1 1673 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 MON2Q7Z3U7 1717 aa12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-290ENST00000640824 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
KCNMA1-290ENST00000640824 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
KCNMA1-290ENST00000640824 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
KCNMA1-290ENST00000640824 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
KCNMA1-290ENST00000640824 SLIT3O75094 1523 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms