RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CPSF1Q10570 1443 aaKnown RBP37.53■■■■□ 3.6
VEGFA-231ENST00000640499 AKAP12Q02952 1782 aa37.52■■■■□ 3.6
VEGFA-231ENST00000640499 C8orf37Q96NL8 207 aa37.52■■■■□ 3.6
VEGFA-231ENST00000640499 SLC12A5Q9H2X9 1139 aa37.52■■■■□ 3.6
VEGFA-231ENST00000640499 CD163L1Q9NR16 1453 aa37.52■■■■□ 3.6
VEGFA-231ENST00000640499 MARF1Q9Y4F3 1742 aaKnown RBP37.5■■■■□ 3.59
VEGFA-231ENST00000640499 SLC24A1O60721 1099 aa37.5■■■■□ 3.59
VEGFA-231ENST00000640499 CRYBG1Q9Y4K1 1723 aa37.5■■■■□ 3.59
VEGFA-231ENST00000640499 AFF2P51816 1311 aa37.48■■■■□ 3.59
VEGFA-231ENST00000640499 TMF1P82094 1093 aa37.48■■■■□ 3.59
VEGFA-231ENST00000640499 HSPA5P11021 654 aaKnown RBP37.47■■■■□ 3.59
VEGFA-231ENST00000640499 NUTM2GQ5VZR2 741 aa37.46■■■■□ 3.59
VEGFA-231ENST00000640499 TMC1Q8TDI8 760 aa37.46■■■■□ 3.59
VEGFA-231ENST00000640499 ZNF692Q9BU19 519 aaPredicted RBP37.46■■■■□ 3.59
VEGFA-231ENST00000640499 BRD4O60885 1362 aaPredicted RBP37.45■■■■□ 3.59
VEGFA-231ENST00000640499 NGLY1Q96IV0 654 aa37.45■■■■□ 3.59
VEGFA-231ENST00000640499 EIF4G2P78344 907 aaKnown RBP eCLIP37.44■■■■□ 3.58
VEGFA-231ENST00000640499 FNBP4Q8N3X1 1017 aaPredicted RBP37.42■■■■□ 3.58
VEGFA-231ENST00000640499 ABTB2Q8N961 1025 aa37.42■■■■□ 3.58
VEGFA-231ENST00000640499 MON2Q7Z3U7 1717 aa37.41■■■■□ 3.58
VEGFA-231ENST00000640499 NRKQ7Z2Y5 1582 aa37.41■■■■□ 3.58
VEGFA-231ENST00000640499 KTN1Q86UP2 1357 aaKnown RBP37.4■■■■□ 3.58
VEGFA-231ENST00000640499 TTC21BQ7Z4L5 1316 aa37.39■■■■□ 3.58
VEGFA-231ENST00000640499 ZNF772Q68DY9 489 aaPredicted RBP37.39■■■■□ 3.58
VEGFA-231ENST00000640499 PIK3C2AO00443 1686 aa37.37■■■■□ 3.57
VEGFA-231ENST00000640499 PHRF1Q9P1Y6 1649 aaKnown RBP37.36■■■■□ 3.57
VEGFA-231ENST00000640499 HAP1P54257 671 aaPredicted RBP37.36■■■■□ 3.57
VEGFA-231ENST00000640499 A0A1W2PP64 1363 aa37.36■■■■□ 3.57
VEGFA-231ENST00000640499 BCL9LQ86UU0 1499 aa37.35■■■■□ 3.57
VEGFA-231ENST00000640499 FAM83GA6ND36 823 aa37.35■■■■□ 3.57
VEGFA-231ENST00000640499 USP19O94966 1318 aa37.35■■■■□ 3.57
VEGFA-231ENST00000640499 NINLQ9Y2I6 1382 aa37.34■■■■□ 3.57
VEGFA-231ENST00000640499 SLIT2O94813 1529 aa37.33■■■■□ 3.57
VEGFA-231ENST00000640499 USP21Q9UK80 565 aa37.32■■■■□ 3.56
VEGFA-231ENST00000640499 CDCA8Q53HL2 280 aa37.3■■■■□ 3.56
VEGFA-231ENST00000640499 HDGFL2Q7Z4V5 671 aaPredicted RBP37.3■■■■□ 3.56
VEGFA-231ENST00000640499 NLRP13Q86W25 1043 aa37.3■■■■□ 3.56
VEGFA-231ENST00000640499 TERF2IPQ9NYB0 399 aa37.3■■■■□ 3.56
VEGFA-231ENST00000640499 NLRP6P59044 892 aa37.29■■■■□ 3.56
VEGFA-231ENST00000640499 TTC21AQ8NDW8 1320 aa37.29■■■■□ 3.56
VEGFA-231ENST00000640499 C11orf95C9JLR9 678 aaPredicted RBP37.28■■■■□ 3.56
VEGFA-231ENST00000640499 QTRT2Q9H974 415 aaKnown RBP37.28■■■■□ 3.56
VEGFA-231ENST00000640499 ZRANB1Q9UGI0 708 aa37.27■■■■□ 3.56
VEGFA-231ENST00000640499 MYOM1P52179 1685 aa37.27■■■■□ 3.56
VEGFA-231ENST00000640499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.26■■■■□ 3.56
VEGFA-231ENST00000640499 PLCH1Q4KWH8 1693 aa37.25■■■■□ 3.55
VEGFA-231ENST00000640499 EDC4Q6P2E9 1401 aaKnown RBP37.25■■■■□ 3.55
VEGFA-231ENST00000640499 SLIT3O75094 1523 aa37.25■■■■□ 3.55
VEGFA-231ENST00000640499 GCP02774 474 aa37.24■■■■□ 3.55
VEGFA-231ENST00000640499 ANKRD36BQ8N2N9 1353 aa37.24■■■■□ 3.55
VEGFA-231ENST00000640499 KIAA0232Q92628 1395 aa37.24■■■■□ 3.55
VEGFA-231ENST00000640499 ATRNO75882 1429 aa37.24■■■■□ 3.55
VEGFA-231ENST00000640499 ZC3H6P61129 1189 aaKnown RBP37.23■■■■□ 3.55
VEGFA-231ENST00000640499 NME9Q86XW9 330 aa37.23■■■■□ 3.55
VEGFA-231ENST00000640499 UNC5CLQ8IV45 518 aa37.21■■■■□ 3.55
VEGFA-231ENST00000640499 COL14A1Q05707 1796 aaKnown RBP37.21■■■■□ 3.55
VEGFA-231ENST00000640499 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.21■■■■□ 3.55
VEGFA-231ENST00000640499 USP31Q70CQ4 1352 aa37.2■■■■□ 3.55
VEGFA-231ENST00000640499 NWD2Q9ULI1 1742 aa37.2■■■■□ 3.55
VEGFA-231ENST00000640499 TRPC5Q9UL62 973 aaPredicted RBP37.19■■■■□ 3.54
VEGFA-231ENST00000640499 SOCS7O14512 581 aa37.18■■■■□ 3.54
VEGFA-231ENST00000640499 RXRBP28702 533 aa37.18■■■■□ 3.54
VEGFA-231ENST00000640499 CHRNA2Q15822 529 aa37.18■■■■□ 3.54
VEGFA-231ENST00000640499 PRDM11Q9NQV5 511 aa37.17■■■■□ 3.54
VEGFA-231ENST00000640499 USP54Q70EL1 1684 aa37.17■■■■□ 3.54
VEGFA-231ENST00000640499 CPDO75976 1380 aa37.17■■■■□ 3.54
VEGFA-231ENST00000640499 CARD14Q9BXL6 1004 aa37.16■■■■□ 3.54
VEGFA-231ENST00000640499 NRAPQ86VF7 1730 aa37.16■■■■□ 3.54
VEGFA-231ENST00000640499 BTG4Q9NY30 223 aa37.15■■■■□ 3.54
VEGFA-231ENST00000640499 RBM6P78332 1123 aaKnown RBP37.14■■■■□ 3.54
VEGFA-231ENST00000640499 POLR3GLQ9BT43 218 aa37.11■■■■□ 3.53
VEGFA-231ENST00000640499 NFAT5O94916 1531 aa37.1■■■■□ 3.53
VEGFA-231ENST00000640499 LMO7Q8WWI1 1683 aa37.09■■■■□ 3.53
VEGFA-231ENST00000640499 GJD4Q96KN9 370 aaPredicted RBP37.09■■■■□ 3.53
VEGFA-231ENST00000640499 OVOS2A0A0J9YW53 1432 aa37.09■■■■□ 3.53
VEGFA-231ENST00000640499 OVOS2Q6IE36 1432 aa37.09■■■■□ 3.53
VEGFA-231ENST00000640499 VPS72Q15906 364 aa37.08■■■■□ 3.53
VEGFA-231ENST00000640499 CAMTA1Q9Y6Y1 1673 aa37.08■■■■□ 3.53
VEGFA-231ENST00000640499 GLI3P10071 1580 aa37.08■■■■□ 3.53
VEGFA-231ENST00000640499 CDK12Q9NYV4 1490 aaPredicted RBP37.07■■■■□ 3.52
VEGFA-231ENST00000640499 COL18A1P39060 1754 aa37.06■■■■□ 3.52
VEGFA-231ENST00000640499 FYB1O15117 783 aa37.05■■■■□ 3.52
VEGFA-231ENST00000640499 SOX12O15370 315 aa37.05■■■■□ 3.52
VEGFA-231ENST00000640499 ARHGEF25Q86VW2 580 aa37.05■■■■□ 3.52
VEGFA-231ENST00000640499 KCNH5Q8NCM2 988 aa37.05■■■■□ 3.52
VEGFA-231ENST00000640499 KIF7Q2M1P5 1343 aa37.05■■■■□ 3.52
VEGFA-231ENST00000640499 RGS12O14924 1447 aa37.03■■■■□ 3.52
VEGFA-231ENST00000640499 AATKQ6ZMQ8 1374 aa37.01■■■■□ 3.51
VEGFA-231ENST00000640499 NSD3Q9BZ95 1437 aa37.01■■■■□ 3.51
VEGFA-231ENST00000640499 AXIN2Q9Y2T1 843 aa37■■■■□ 3.51
VEGFA-231ENST00000640499 ZBTB7CA1YPR0 619 aa36.98■■■■□ 3.51
VEGFA-231ENST00000640499 GGNBP2Q9H3C7 697 aa36.98■■■■□ 3.51
VEGFA-231ENST00000640499 PANK3Q9H999 370 aa36.97■■■■□ 3.51
VEGFA-231ENST00000640499 SPATA31A5Q5VU36 1347 aa36.95■■■■□ 3.51
VEGFA-231ENST00000640499 SPATA31A7Q8IWB4 1347 aa36.95■■■■□ 3.51
VEGFA-231ENST00000640499 STRN4Q9NRL3 753 aa36.95■■■■□ 3.51
VEGFA-231ENST00000640499 FBLN1P23142 703 aa36.94■■■■□ 3.5
VEGFA-231ENST00000640499 COG3Q96JB2 828 aa36.94■■■■□ 3.5
VEGFA-231ENST00000640499 KIF20BQ96Q89 1820 aa36.94■■■■□ 3.5
VEGFA-231ENST00000640499 COL5A2P05997 1499 aaPredicted RBP36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms