RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SPON1Q9HCB6 807 aa20.47■□□□□ 0.87
HLA-C-210ENST00000640219 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
HLA-C-210ENST00000640219 SPATA31A1Q5TZJ5 1347 aa20.44■□□□□ 0.86
HLA-C-210ENST00000640219 NINLQ9Y2I6 1382 aa20.44■□□□□ 0.86
HLA-C-210ENST00000640219 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
HLA-C-210ENST00000640219 KCNQ2O43526 872 aa20.43■□□□□ 0.86
HLA-C-210ENST00000640219 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
HLA-C-210ENST00000640219 RREB1Q92766 1687 aa20.42■□□□□ 0.86
HLA-C-210ENST00000640219 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
HLA-C-210ENST00000640219 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
HLA-C-210ENST00000640219 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
HLA-C-210ENST00000640219 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
HLA-C-210ENST00000640219 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
HLA-C-210ENST00000640219 NUP188Q5SRE5 1749 aa20.4■□□□□ 0.86
HLA-C-210ENST00000640219 ALS2Q96Q42 1657 aa20.39■□□□□ 0.86
HLA-C-210ENST00000640219 DHX57Q6P158 1386 aaKnown RBP20.39■□□□□ 0.85
HLA-C-210ENST00000640219 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
HLA-C-210ENST00000640219 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
HLA-C-210ENST00000640219 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
HLA-C-210ENST00000640219 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
HLA-C-210ENST00000640219 POGKQ9P215 609 aa20.37■□□□□ 0.85
HLA-C-210ENST00000640219 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
HLA-C-210ENST00000640219 CHRNA2Q15822 529 aa20.36■□□□□ 0.85
HLA-C-210ENST00000640219 ZNF784Q8NCA9 323 aaPredicted RBP20.36■□□□□ 0.85
HLA-C-210ENST00000640219 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
HLA-C-210ENST00000640219 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
HLA-C-210ENST00000640219 KIAA0232Q92628 1395 aa20.34■□□□□ 0.85
HLA-C-210ENST00000640219 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
HLA-C-210ENST00000640219 CAMTA1Q9Y6Y1 1673 aa20.34■□□□□ 0.85
HLA-C-210ENST00000640219 CRYBG1Q9Y4K1 1723 aa20.33■□□□□ 0.85
HLA-C-210ENST00000640219 BARGINQ6ZT62 677 aa20.33■□□□□ 0.85
HLA-C-210ENST00000640219 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
HLA-C-210ENST00000640219 EVA1CP58658 441 aa20.31■□□□□ 0.84
HLA-C-210ENST00000640219 HIRIP3Q9BW71 556 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-210ENST00000640219 PRR36Q9H6K5 1346 aa20.3■□□□□ 0.84
HLA-C-210ENST00000640219 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
HLA-C-210ENST00000640219 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
HLA-C-210ENST00000640219 EIF3AQ14152 1382 aaKnown RBP20.29■□□□□ 0.84
HLA-C-210ENST00000640219 DLC1Q96QB1 1528 aa20.27■□□□□ 0.84
HLA-C-210ENST00000640219 SSH2Q76I76 1423 aa20.27■□□□□ 0.83
HLA-C-210ENST00000640219 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.83
HLA-C-210ENST00000640219 C1QTNF8P60827 252 aa20.26■□□□□ 0.83
HLA-C-210ENST00000640219 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
HLA-C-210ENST00000640219 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
HLA-C-210ENST00000640219 TULP4Q9NRJ4 1543 aa20.25■□□□□ 0.83
HLA-C-210ENST00000640219 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-210ENST00000640219 WASLO00401 505 aaPredicted RBP20.24■□□□□ 0.83
HLA-C-210ENST00000640219 NRKQ7Z2Y5 1582 aa20.24■□□□□ 0.83
HLA-C-210ENST00000640219 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
HLA-C-210ENST00000640219 ANO8Q9HCE9 1232 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-210ENST00000640219 TRAK1Q9UPV9 953 aa20.23■□□□□ 0.83
HLA-C-210ENST00000640219 ZBTB7AO95365 584 aa20.22■□□□□ 0.83
HLA-C-210ENST00000640219 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
HLA-C-210ENST00000640219 THRAP3Q9Y2W1 955 aaKnown RBP20.22■□□□□ 0.83
HLA-C-210ENST00000640219 PHRF1Q9P1Y6 1649 aaKnown RBP20.22■□□□□ 0.83
HLA-C-210ENST00000640219 PLSCR1O15162 318 aa20.21■□□□□ 0.83
HLA-C-210ENST00000640219 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
HLA-C-210ENST00000640219 PDGFDQ9GZP0 370 aaPredicted RBP20.21■□□□□ 0.83
HLA-C-210ENST00000640219 CASZ1Q86V15 1759 aa20.2■□□□□ 0.82
HLA-C-210ENST00000640219 PTGER2P43116 358 aa20.19■□□□□ 0.82
HLA-C-210ENST00000640219 ATF5Q9Y2D1 282 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-210ENST00000640219 ATP7BP35670 1465 aa20.18■□□□□ 0.82
HLA-C-210ENST00000640219 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-210ENST00000640219 MYOM1P52179 1685 aa20.18■□□□□ 0.82
HLA-C-210ENST00000640219 SYT17Q9BSW7 474 aa20.17■□□□□ 0.82
HLA-C-210ENST00000640219 FHDC1Q9C0D6 1143 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-210ENST00000640219 OVOS2A0A0G2JMS6 1433 aa20.17■□□□□ 0.82
HLA-C-210ENST00000640219 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
HLA-C-210ENST00000640219 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
HLA-C-210ENST00000640219 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-210ENST00000640219 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
HLA-C-210ENST00000640219 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
HLA-C-210ENST00000640219 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
HLA-C-210ENST00000640219 NUDT16Q96DE0 195 aaKnown RBP20.15■□□□□ 0.82
HLA-C-210ENST00000640219 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
HLA-C-210ENST00000640219 UTRNP46939 3433 aa20.14■□□□□ 0.82
HLA-C-210ENST00000640219 CPDO75976 1380 aa20.14■□□□□ 0.81
HLA-C-210ENST00000640219 PROM2Q8N271 834 aa20.13■□□□□ 0.81
HLA-C-210ENST00000640219 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
HLA-C-210ENST00000640219 PTF1AQ7RTS3 328 aa20.12■□□□□ 0.81
HLA-C-210ENST00000640219 PEAK1Q9H792 1746 aa20.12■□□□□ 0.81
HLA-C-210ENST00000640219 CHD4Q14839 1912 aa20.12■□□□□ 0.81
HLA-C-210ENST00000640219 ITSN1Q15811 1721 aa20.11■□□□□ 0.81
HLA-C-210ENST00000640219 ABTB2Q8N961 1025 aa20.11■□□□□ 0.81
HLA-C-210ENST00000640219 STK32BQ9NY57 414 aa20.11■□□□□ 0.81
HLA-C-210ENST00000640219 ACEP12821 1306 aa20.1■□□□□ 0.81
HLA-C-210ENST00000640219 DDB1Q16531 1140 aa20.1■□□□□ 0.81
HLA-C-210ENST00000640219 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
HLA-C-210ENST00000640219 COL5A2P05997 1499 aaPredicted RBP20.09■□□□□ 0.81
HLA-C-210ENST00000640219 CRB1P82279 1406 aa20.09■□□□□ 0.81
HLA-C-210ENST00000640219 POLR3AO14802 1390 aaPredicted RBP20.08■□□□□ 0.81
HLA-C-210ENST00000640219 USP19O94966 1318 aa20.08■□□□□ 0.81
HLA-C-210ENST00000640219 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
HLA-C-210ENST00000640219 MTFR1LQ9H019 292 aa20.08■□□□□ 0.81
HLA-C-210ENST00000640219 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-210ENST00000640219 GCP02774 474 aa20.07■□□□□ 0.8
HLA-C-210ENST00000640219 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
HLA-C-210ENST00000640219 TXNRD1Q16881 649 aa20.06■□□□□ 0.8
HLA-C-210ENST00000640219 SGIP1Q9BQI5 828 aa20.06■□□□□ 0.8
HLA-C-210ENST00000640219 NLRP13Q86W25 1043 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms