RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
PTP4A1-207ENST00000639568 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
PTP4A1-207ENST00000639568 CAMTA1Q9Y6Y1 1673 aa16.69■□□□□ 0.26
PTP4A1-207ENST00000639568 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
PTP4A1-207ENST00000639568 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
PTP4A1-207ENST00000639568 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
PTP4A1-207ENST00000639568 EVA1CP58658 441 aa16.68■□□□□ 0.26
PTP4A1-207ENST00000639568 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
PTP4A1-207ENST00000639568 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
PTP4A1-207ENST00000639568 ABCA3Q99758 1704 aa16.67■□□□□ 0.26
PTP4A1-207ENST00000639568 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
PTP4A1-207ENST00000639568 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
PTP4A1-207ENST00000639568 RREB1Q92766 1687 aa16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 BARGINQ6ZT62 677 aa16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
PTP4A1-207ENST00000639568 CHRNA2Q15822 529 aa16.64■□□□□ 0.25
PTP4A1-207ENST00000639568 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
PTP4A1-207ENST00000639568 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
PTP4A1-207ENST00000639568 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
PTP4A1-207ENST00000639568 PTGER2P43116 358 aa16.62■□□□□ 0.25
PTP4A1-207ENST00000639568 KIAA0232Q92628 1395 aa16.62■□□□□ 0.25
PTP4A1-207ENST00000639568 NRKQ7Z2Y5 1582 aa16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 PLSCR1O15162 318 aa16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
PTP4A1-207ENST00000639568 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
PTP4A1-207ENST00000639568 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
PTP4A1-207ENST00000639568 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
PTP4A1-207ENST00000639568 POGKQ9P215 609 aa16.6■□□□□ 0.25
PTP4A1-207ENST00000639568 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
PTP4A1-207ENST00000639568 PPLO60437 1756 aa16.59■□□□□ 0.25
PTP4A1-207ENST00000639568 GPR162Q16538 588 aa16.58■□□□□ 0.24
PTP4A1-207ENST00000639568 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
PTP4A1-207ENST00000639568 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
PTP4A1-207ENST00000639568 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
PTP4A1-207ENST00000639568 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
PTP4A1-207ENST00000639568 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
PTP4A1-207ENST00000639568 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
PTP4A1-207ENST00000639568 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
PTP4A1-207ENST00000639568 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
PTP4A1-207ENST00000639568 IFT172Q9UG01 1749 aa16.54■□□□□ 0.24
PTP4A1-207ENST00000639568 ARXQ96QS3 562 aa16.54■□□□□ 0.24
PTP4A1-207ENST00000639568 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 EIF3AQ14152 1382 aaKnown RBP16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 HIRIP3Q9BW71 556 aaPredicted RBP16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 MYOM1P52179 1685 aa16.53■□□□□ 0.24
PTP4A1-207ENST00000639568 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-207ENST00000639568 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 TRPM3Q9HCF6 1732 aaPredicted RBP16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 ALS2Q96Q42 1657 aa16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
PTP4A1-207ENST00000639568 PROM2Q8N271 834 aa16.5■□□□□ 0.23
PTP4A1-207ENST00000639568 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
PTP4A1-207ENST00000639568 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
PTP4A1-207ENST00000639568 DDB1Q16531 1140 aa16.48■□□□□ 0.23
PTP4A1-207ENST00000639568 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
PTP4A1-207ENST00000639568 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
PTP4A1-207ENST00000639568 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
PTP4A1-207ENST00000639568 CHD4Q14839 1912 aa16.47■□□□□ 0.23
PTP4A1-207ENST00000639568 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
PTP4A1-207ENST00000639568 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
PTP4A1-207ENST00000639568 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
PTP4A1-207ENST00000639568 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
PTP4A1-207ENST00000639568 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
PTP4A1-207ENST00000639568 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
PTP4A1-207ENST00000639568 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
PTP4A1-207ENST00000639568 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
PTP4A1-207ENST00000639568 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
PTP4A1-207ENST00000639568 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
PTP4A1-207ENST00000639568 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
PTP4A1-207ENST00000639568 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
PTP4A1-207ENST00000639568 HSPA6P17066 643 aa16.42■□□□□ 0.22
PTP4A1-207ENST00000639568 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
PTP4A1-207ENST00000639568 ATP7BP35670 1465 aa16.42■□□□□ 0.22
PTP4A1-207ENST00000639568 CPDO75976 1380 aa16.41■□□□□ 0.22
PTP4A1-207ENST00000639568 CRB1P82279 1406 aa16.41■□□□□ 0.22
PTP4A1-207ENST00000639568 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
PTP4A1-207ENST00000639568 POLD1P28340 1107 aa16.4■□□□□ 0.22
PTP4A1-207ENST00000639568 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
PTP4A1-207ENST00000639568 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
PTP4A1-207ENST00000639568 MARCH10Q8NA82 808 aaPredicted RBP16.39■□□□□ 0.21
PTP4A1-207ENST00000639568 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
PTP4A1-207ENST00000639568 GPBP1L1Q9HC44 474 aaPredicted RBP16.39■□□□□ 0.21
PTP4A1-207ENST00000639568 GCP02774 474 aa16.38■□□□□ 0.21
PTP4A1-207ENST00000639568 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
PTP4A1-207ENST00000639568 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
PTP4A1-207ENST00000639568 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms