RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
PDE4D-229ENST00000638939 ARHGEF10O15013 1369 aa8.2□□□□□ -1.1
PDE4D-229ENST00000638939 BLMP54132 1417 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-229ENST00000638939 WAPLQ7Z5K2 1190 aa8.19□□□□□ -1.1
PDE4D-229ENST00000638939 CCDC125Q86Z20 511 aa8.19□□□□□ -1.1
PDE4D-229ENST00000638939 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
PDE4D-229ENST00000638939 EIF3AQ14152 1382 aaKnown RBP8.19□□□□□ -1.1
PDE4D-229ENST00000638939 RREB1Q92766 1687 aa8.18□□□□□ -1.1
PDE4D-229ENST00000638939 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
PDE4D-229ENST00000638939 XPCQ01831 940 aaPredicted RBP8.18□□□□□ -1.1
PDE4D-229ENST00000638939 UNC5CLQ8IV45 518 aa8.18□□□□□ -1.1
PDE4D-229ENST00000638939 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
PDE4D-229ENST00000638939 STK26Q9P289 416 aa8.18□□□□□ -1.1
PDE4D-229ENST00000638939 DHX57Q6P158 1386 aaKnown RBP8.18□□□□□ -1.1
PDE4D-229ENST00000638939 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
PDE4D-229ENST00000638939 TMEM132EQ6IEE7 984 aa8.17□□□□□ -1.1
PDE4D-229ENST00000638939 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-229ENST00000638939 NRKQ7Z2Y5 1582 aa8.17□□□□□ -1.1
PDE4D-229ENST00000638939 RGPD3A6NKT7 1758 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-229ENST00000638939 RGPD4Q7Z3J3 1758 aa8.17□□□□□ -1.1
PDE4D-229ENST00000638939 NUTM2FA1L443 756 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 ATP7BP35670 1465 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 POLA2Q14181 598 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 POTEDQ86YR6 584 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 KLHL34Q8N239 644 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 LMO7Q8WWI1 1683 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 PHF8Q9UPP1 1060 aa8.16□□□□□ -1.1
PDE4D-229ENST00000638939 PARP4Q9UKK3 1724 aaKnown RBP8.15□□□□□ -1.1
PDE4D-229ENST00000638939 QRICH2Q9H0J4 1663 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 PSME1Q06323 249 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 VPS72Q15906 364 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 KRT28Q7Z3Y7 464 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 SPOCK2Q92563 424 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.1
PDE4D-229ENST00000638939 NUP188Q5SRE5 1749 aa8.15□□□□□ -1.11
PDE4D-229ENST00000638939 RAB3GAP2Q9H2M9 1393 aa8.14□□□□□ -1.11
PDE4D-229ENST00000638939 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
PDE4D-229ENST00000638939 SBF2Q86WG5 1849 aa8.14□□□□□ -1.11
PDE4D-229ENST00000638939 DISP2A7MBM2 1401 aa8.13□□□□□ -1.11
PDE4D-229ENST00000638939 AKAP12Q02952 1782 aa8.13□□□□□ -1.11
PDE4D-229ENST00000638939 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
PDE4D-229ENST00000638939 CAPN15O75808 1086 aa8.13□□□□□ -1.11
PDE4D-229ENST00000638939 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
PDE4D-229ENST00000638939 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
PDE4D-229ENST00000638939 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
PDE4D-229ENST00000638939 GPRASP1Q5JY77 1395 aa8.11□□□□□ -1.11
PDE4D-229ENST00000638939 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
PDE4D-229ENST00000638939 STAC3Q96MF2 364 aa8.11□□□□□ -1.11
PDE4D-229ENST00000638939 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
PDE4D-229ENST00000638939 PEAK1Q9H792 1746 aa8.1□□□□□ -1.11
PDE4D-229ENST00000638939 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
PDE4D-229ENST00000638939 POGKQ9P215 609 aa8.1□□□□□ -1.11
PDE4D-229ENST00000638939 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
PDE4D-229ENST00000638939 PIK3C2AO00443 1686 aa8.09□□□□□ -1.11
PDE4D-229ENST00000638939 SF3B2Q13435 895 aaKnown RBP8.09□□□□□ -1.11
PDE4D-229ENST00000638939 SAFB2Q14151 953 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDE4D-229ENST00000638939 KRT27Q7Z3Y8 459 aa8.09□□□□□ -1.11
PDE4D-229ENST00000638939 ZBTB47Q9UFB7 747 aaPredicted RBP8.09□□□□□ -1.11
PDE4D-229ENST00000638939 TRPM1Q7Z4N2 1603 aa8.09□□□□□ -1.11
PDE4D-229ENST00000638939 RGPD5Q99666 1765 aa8.09□□□□□ -1.11
PDE4D-229ENST00000638939 POLR3AO14802 1390 aaPredicted RBP8.09□□□□□ -1.12
PDE4D-229ENST00000638939 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 SPATA31A5Q5VU36 1347 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 SPATA31A7Q8IWB4 1347 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 COL18A1P39060 1754 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 WASLO00401 505 aaPredicted RBP8.08□□□□□ -1.12
PDE4D-229ENST00000638939 ECM2O94769 699 aaPredicted RBP8.08□□□□□ -1.12
PDE4D-229ENST00000638939 DEFB132Q7Z7B7 95 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 PMFBP1Q8TBY8 1022 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 CCDC9Q9Y3X0 531 aaKnown RBP8.08□□□□□ -1.12
PDE4D-229ENST00000638939 MON2Q7Z3U7 1717 aa8.08□□□□□ -1.12
PDE4D-229ENST00000638939 MINK1Q8N4C8 1332 aaPredicted RBP8.07□□□□□ -1.12
PDE4D-229ENST00000638939 C1QBPQ07021 282 aaKnown RBP8.07□□□□□ -1.12
PDE4D-229ENST00000638939 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
PDE4D-229ENST00000638939 BTG4Q9NY30 223 aa8.07□□□□□ -1.12
PDE4D-229ENST00000638939 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
PDE4D-229ENST00000638939 SLIT3O75094 1523 aa8.07□□□□□ -1.12
PDE4D-229ENST00000638939 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 CAMTA1Q9Y6Y1 1673 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 BAG6P46379 1132 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
PDE4D-229ENST00000638939 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
PDE4D-229ENST00000638939 CPDO75976 1380 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 PARD3Q8TEW0 1356 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 KIAA0232Q92628 1395 aa8.06□□□□□ -1.12
PDE4D-229ENST00000638939 LTN1O94822 1766 aa8.05□□□□□ -1.12
PDE4D-229ENST00000638939 CASZ1Q86V15 1759 aa8.05□□□□□ -1.12
PDE4D-229ENST00000638939 HRCP23327 699 aa8.05□□□□□ -1.12
PDE4D-229ENST00000638939 DCAF11Q8TEB1 546 aa8.05□□□□□ -1.12
PDE4D-229ENST00000638939 USP19O94966 1318 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 ABCC6O95255 1503 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 A0A0G2JS52 829 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 MYT1Q01538 1121 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 NGDNQ8NEJ9 315 aaKnown RBP8.04□□□□□ -1.12
PDE4D-229ENST00000638939 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
PDE4D-229ENST00000638939 BRD4O60885 1362 aaPredicted RBP8.04□□□□□ -1.12
PDE4D-229ENST00000638939 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms