RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
SCARB2-210ENST00000638567 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
SCARB2-210ENST00000638567 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
SCARB2-210ENST00000638567 ERC2O15083 957 aa20.18■□□□□ 0.82
SCARB2-210ENST00000638567 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
SCARB2-210ENST00000638567 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 MBD3O95983 291 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 ZNF428Q96B54 188 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 CIZ1Q9ULV3 898 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-210ENST00000638567 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-210ENST00000638567 GNAI2P04899 355 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
SCARB2-210ENST00000638567 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
SCARB2-210ENST00000638567 TRIM27P14373 513 aa20.16■□□□□ 0.82
SCARB2-210ENST00000638567 NFE2L2Q16236 605 aa20.16■□□□□ 0.82
SCARB2-210ENST00000638567 DDX58O95786 925 aaKnown RBP20.16■□□□□ 0.82
SCARB2-210ENST00000638567 ISY1Q9ULR0 285 aaKnown RBP20.16■□□□□ 0.82
SCARB2-210ENST00000638567 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
SCARB2-210ENST00000638567 GAS2L2Q8NHY3 880 aa20.15■□□□□ 0.82
SCARB2-210ENST00000638567 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
SCARB2-210ENST00000638567 MCM2P49736 904 aa20.15■□□□□ 0.82
SCARB2-210ENST00000638567 PSME1Q06323 249 aa20.15■□□□□ 0.82
SCARB2-210ENST00000638567 TESK2Q96S53 571 aa20.15■□□□□ 0.82
SCARB2-210ENST00000638567 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
SCARB2-210ENST00000638567 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.82
SCARB2-210ENST00000638567 CCDC27Q2M243 656 aa20.14■□□□□ 0.82
SCARB2-210ENST00000638567 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.82
SCARB2-210ENST00000638567 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.81
SCARB2-210ENST00000638567 CCDC173Q0VFZ6 552 aa20.14■□□□□ 0.81
SCARB2-210ENST00000638567 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
SCARB2-210ENST00000638567 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
SCARB2-210ENST00000638567 ESPNB1AK53 854 aa20.13■□□□□ 0.81
SCARB2-210ENST00000638567 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
SCARB2-210ENST00000638567 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
SCARB2-210ENST00000638567 CCDC34Q96HJ3 373 aa20.12■□□□□ 0.81
SCARB2-210ENST00000638567 PCDHB15Q9Y5E8 787 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 RTEL1-TNFRSF6BF6WH68 1400 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 CCDC39Q9UFE4 941 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
SCARB2-210ENST00000638567 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
SCARB2-210ENST00000638567 DCTN1Q14203 1278 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 FIBPO43427 364 aa20.11■□□□□ 0.81
SCARB2-210ENST00000638567 LRRCC1Q9C099 1032 aa20.1■□□□□ 0.81
SCARB2-210ENST00000638567 CCT4P50991 539 aaKnown RBP20.1■□□□□ 0.81
SCARB2-210ENST00000638567 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
SCARB2-210ENST00000638567 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
SCARB2-210ENST00000638567 FOSBP53539 338 aa20.09■□□□□ 0.81
SCARB2-210ENST00000638567 RPAP2Q8IXW5 612 aaPredicted RBP20.09■□□□□ 0.81
SCARB2-210ENST00000638567 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
SCARB2-210ENST00000638567 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
SCARB2-210ENST00000638567 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
SCARB2-210ENST00000638567 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.81
SCARB2-210ENST00000638567 CREBRFQ8IUR6 639 aa20.08■□□□□ 0.81
SCARB2-210ENST00000638567 MPNDQ8N594 471 aa20.08■□□□□ 0.81
SCARB2-210ENST00000638567 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
SCARB2-210ENST00000638567 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.8
SCARB2-210ENST00000638567 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.8
SCARB2-210ENST00000638567 CHMP4CQ96CF2 233 aa20.07■□□□□ 0.8
SCARB2-210ENST00000638567 TSPY26PQ9H489 355 aa20.07■□□□□ 0.8
SCARB2-210ENST00000638567 ABCC11Q96J66 1382 aa20.07■□□□□ 0.8
SCARB2-210ENST00000638567 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
SCARB2-210ENST00000638567 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
SCARB2-210ENST00000638567 FSD1Q9BTV5 496 aa20.06■□□□□ 0.8
SCARB2-210ENST00000638567 CPLX1O14810 134 aa20.06■□□□□ 0.8
SCARB2-210ENST00000638567 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
SCARB2-210ENST00000638567 IL1RAPL2Q9NP60 686 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 ATP10BO94823 1461 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 EMILIN1Q9Y6C2 1016 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 MAP4K4O95819 1239 aaPredicted RBP20.05■□□□□ 0.8
SCARB2-210ENST00000638567 IFT57Q9NWB7 429 aa20.05■□□□□ 0.8
SCARB2-210ENST00000638567 NOS1P29475 1434 aa20.04■□□□□ 0.8
SCARB2-210ENST00000638567 SMARCA5O60264 1052 aaPredicted RBP20.04■□□□□ 0.8
SCARB2-210ENST00000638567 MCM10Q7L590 875 aa20.04■□□□□ 0.8
SCARB2-210ENST00000638567 CPLX2Q6PUV4 134 aaKnown RBP20.04■□□□□ 0.8
SCARB2-210ENST00000638567 NEUROD6Q96NK8 337 aa20.04■□□□□ 0.8
SCARB2-210ENST00000638567 RAPGEF6Q8TEU7 1601 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 RASSF8Q8NHQ8 419 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 TNPO1Q92973 898 aaKnown RBP20.03■□□□□ 0.8
SCARB2-210ENST00000638567 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
SCARB2-210ENST00000638567 IDI1Q13907 227 aa20.03■□□□□ 0.8
SCARB2-210ENST00000638567 C14orf93Q9H972 538 aaKnown RBP20.03■□□□□ 0.8
SCARB2-210ENST00000638567 PZPP20742 1482 aa20.02■□□□□ 0.8
SCARB2-210ENST00000638567 TPM2P07951 284 aa20.02■□□□□ 0.8
SCARB2-210ENST00000638567 LRRFIP1Q32MZ4 808 aaKnown RBP20.02■□□□□ 0.8
SCARB2-210ENST00000638567 SRCIN1Q9C0H9 1055 aa20.02■□□□□ 0.8
SCARB2-210ENST00000638567 NME9Q86XW9 330 aa20.02■□□□□ 0.8
SCARB2-210ENST00000638567 PSMA5P28066 241 aa20.02■□□□□ 0.79
SCARB2-210ENST00000638567 CTTNBP2Q8WZ74 1663 aa20.01■□□□□ 0.79
SCARB2-210ENST00000638567 APPP05067 770 aa20.01■□□□□ 0.79
SCARB2-210ENST00000638567 SSFA2P28290 1259 aa20.01■□□□□ 0.79
SCARB2-210ENST00000638567 RBM10P98175 930 aaKnown RBP20.01■□□□□ 0.79
SCARB2-210ENST00000638567 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
SCARB2-210ENST00000638567 FAM135AQ9P2D6 1515 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms