RNA–Protein interactions for RNA: ENST00000635929.1

PLCB1-223, Transcript of phospholipase C beta 1, human

TSL 5

Gene PLCB1, Length 2,291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLCB1-223	ENST00000635929	PTPRG	P23470	1445 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	LAMC1	P11047	1609 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	FAM177B	A6PVY3	158 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	TBC1D9	Q6ZT07	1266 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	PHF23	Q9BUL5	403 aa	Predicted RBP	11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	SMC4	Q9NTJ3	1288 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	FAM135A	Q9P2D6	1515 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	TRIM27	P14373	513 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	ANKRD45	Q5TZF3	282 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	SYAP1	Q96A49	352 aa	Predicted RBP	11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	CFAP44	Q96MT7	982 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	ZNF830	Q96NB3	372 aa	Predicted RBP	11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	ZBTB40	Q9NUA8	1239 aa		11.61	□□□□□ -0.55
PLCB1-223	ENST00000635929	NUP160	Q12769	1436 aa		11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	U2AF2	P26368	475 aa	Known RBP eCLIP	11.6	□□□□□ -0.55	2e-6	■■□□□ 11.5
PLCB1-223	ENST00000635929	FKBP5	Q13451	457 aa	Predicted RBP	11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	UVSSA	Q2YD98	709 aa		11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	ATF7IP	Q6VMQ6	1270 aa		11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	POLR3A	O14802	1390 aa	Predicted RBP	11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	A2M	P01023	1474 aa		11.6	□□□□□ -0.55
PLCB1-223	ENST00000635929	KANK1	Q14678	1352 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	C9orf84	Q5VXU9	1444 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	PRG4	Q92954	1404 aa	Predicted RBP	11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	PKP1	Q13835	747 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	FAM184A	Q8NB25	1140 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	SPTLC3	Q9NUV7	552 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	TRO	Q12816	1431 aa	Predicted RBP	11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	GRIN2A	Q12879	1464 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	ABCC10	Q5T3U5	1492 aa		11.59	□□□□□ -0.55
PLCB1-223	ENST00000635929	CCDC66	A2RUB6	948 aa		11.58	□□□□□ -0.55
PLCB1-223	ENST00000635929	PHF14	O94880	888 aa		11.58	□□□□□ -0.55
PLCB1-223	ENST00000635929	GABPB1	Q06547	395 aa	Predicted RBP	11.58	□□□□□ -0.55
PLCB1-223	ENST00000635929	PLCD3	Q8N3E9	789 aa		11.58	□□□□□ -0.55
PLCB1-223	ENST00000635929	ANKRD7	Q92527	254 aa		11.58	□□□□□ -0.55
PLCB1-223	ENST00000635929	IPO8	O15397	1037 aa	Known RBP	11.58	□□□□□ -0.56
PLCB1-223	ENST00000635929	ST18	O60284	1047 aa		11.58	□□□□□ -0.56
PLCB1-223	ENST00000635929	GCC1	Q96CN9	775 aa		11.58	□□□□□ -0.56
PLCB1-223	ENST00000635929	NOB1	Q9ULX3	412 aa	Known RBP	11.58	□□□□□ -0.56
PLCB1-223	ENST00000635929	CDC45	O75419	566 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	KCNJ4	P48050	445 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	NCBP3	Q53F19	620 aa	Known RBP	11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	CCDC141	Q6ZP82	1450 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	ZBTB22	O15209	634 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	MPND	Q8N594	471 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	TMEM57	Q8N5G2	664 aa		11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	DNAJC2	Q99543	621 aa	Known RBP	11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	TTC12	Q9H892	705 aa	Predicted RBP	11.57	□□□□□ -0.56
PLCB1-223	ENST00000635929	LAMC3	Q9Y6N6	1575 aa		11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	IQGAP2	Q13576	1575 aa		11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	RIOK3	O14730	519 aa	Known RBP	11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	IRX5	P78411	483 aa	Predicted RBP	11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	SSH1	Q8WYL5	1049 aa		11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.56	□□□□□ -0.56	3e-7	■■■□□ 18.8
PLCB1-223	ENST00000635929	ZDHHC9	Q9Y397	364 aa		11.56	□□□□□ -0.56
PLCB1-223	ENST00000635929	NUP153	P49790	1475 aa	Known RBP	11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	SYNM	O15061	1565 aa		11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	CTIF	O43310	598 aa	Known RBP	11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	ADCY5	O95622	1261 aa		11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	EXOSC9	Q06265	439 aa	Known RBP	11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	MORC1	Q86VD1	984 aa		11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	CARD14	Q9BXL6	1004 aa		11.55	□□□□□ -0.56
PLCB1-223	ENST00000635929	SHANK2	Q9UPX8	1470 aa		11.54	□□□□□ -0.56
PLCB1-223	ENST00000635929	ZGPAT	Q8N5A5	531 aa	Known RBP	11.54	□□□□□ -0.56
PLCB1-223	ENST00000635929	TIGD1	Q96MW7	591 aa		11.54	□□□□□ -0.56
PLCB1-223	ENST00000635929	ITSN2	Q9NZM3	1697 aa		11.54	□□□□□ -0.56
PLCB1-223	ENST00000635929	TPM3	P06753	285 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	SLC20A2	Q08357	652 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	USP26	Q9BXU7	913 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	USP25	Q9UHP3	1055 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	SLFN14	P0C7P3	912 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	PLA2R1	Q13018	1463 aa		11.53	□□□□□ -0.56
PLCB1-223	ENST00000635929	TSR2	Q969E8	191 aa	Known RBP	11.52	□□□□□ -0.56
PLCB1-223	ENST00000635929	CFAP53	Q96M91	514 aa		11.52	□□□□□ -0.56
PLCB1-223	ENST00000635929	CROCC2	H7BZ55	1655 aa		11.52	□□□□□ -0.56
PLCB1-223	ENST00000635929	PLEKHD1	A6NEE1	506 aa		11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	VGF	O15240	615 aa	Predicted RBP	11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	SYCP1	Q15431	976 aa		11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	KIAA1524	Q8TCG1	905 aa		11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.52	□□□□□ -0.57
PLCB1-223	ENST00000635929	CTNNA3	Q9UI47	895 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	AK9	Q5TCS8	1911 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	TERF2	Q15554	542 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	RSPH4A	Q5TD94	716 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	CHAMP1	Q96JM3	812 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	CALCOCO1	Q9P1Z2	691 aa		11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	DDX41	Q9UJV9	622 aa	Known RBP	11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.51	□□□□□ -0.57
PLCB1-223	ENST00000635929	KDM4A	O75164	1064 aa		11.5	□□□□□ -0.57
PLCB1-223	ENST00000635929	CASC1	Q6TDU7	716 aa		11.5	□□□□□ -0.57
PLCB1-223	ENST00000635929	SHROOM2	Q13796	1616 aa		11.5	□□□□□ -0.57
PLCB1-223	ENST00000635929	SYNJ2	O15056	1496 aa		11.5	□□□□□ -0.57
PLCB1-223	ENST00000635929	SCAF11	Q99590	1463 aa	Known RBP	11.5	□□□□□ -0.57
PLCB1-223	ENST00000635929	GOLGA6L6	A8MZA4	724 aa		11.49	□□□□□ -0.57
PLCB1-223	ENST00000635929	PLCB2	Q00722	1185 aa		11.49	□□□□□ -0.57
PLCB1-223	ENST00000635929	INTS3	Q68E01	1043 aa	Known RBP	11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms