RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ABCA3Q99758 1704 aa23.9■■□□□ 1.42
LIN28B-202ENST00000635857 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
LIN28B-202ENST00000635857 TMF1P82094 1093 aa23.87■■□□□ 1.41
LIN28B-202ENST00000635857 POTEAQ6S8J7 498 aa23.86■■□□□ 1.41
LIN28B-202ENST00000635857 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
LIN28B-202ENST00000635857 CABLES1Q8TDN4 633 aa23.86■■□□□ 1.41
LIN28B-202ENST00000635857 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
LIN28B-202ENST00000635857 USP6P35125 1406 aa23.85■■□□□ 1.41
LIN28B-202ENST00000635857 ABTB2Q8N961 1025 aa23.85■■□□□ 1.41
LIN28B-202ENST00000635857 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
LIN28B-202ENST00000635857 PUS7Q96PZ0 661 aaKnown RBP23.84■■□□□ 1.41
LIN28B-202ENST00000635857 TESK2Q96S53 571 aa23.84■■□□□ 1.41
LIN28B-202ENST00000635857 USP21Q9UK80 565 aa23.84■■□□□ 1.41
LIN28B-202ENST00000635857 CDCA8Q53HL2 280 aa23.83■■□□□ 1.41
LIN28B-202ENST00000635857 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
LIN28B-202ENST00000635857 KTN1Q86UP2 1357 aaKnown RBP23.81■■□□□ 1.4
LIN28B-202ENST00000635857 NINLQ9Y2I6 1382 aa23.81■■□□□ 1.4
LIN28B-202ENST00000635857 NUTM2GQ5VZR2 741 aa23.8■■□□□ 1.4
LIN28B-202ENST00000635857 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
LIN28B-202ENST00000635857 TERF2IPQ9NYB0 399 aa23.8■■□□□ 1.4
LIN28B-202ENST00000635857 CRYBG1Q9Y4K1 1723 aa23.8■■□□□ 1.4
LIN28B-202ENST00000635857 PHRF1Q9P1Y6 1649 aaKnown RBP23.8■■□□□ 1.4
LIN28B-202ENST00000635857 RXRBP28702 533 aa23.79■■□□□ 1.4
LIN28B-202ENST00000635857 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
LIN28B-202ENST00000635857 FNBP4Q8N3X1 1017 aaPredicted RBP23.79■■□□□ 1.4
LIN28B-202ENST00000635857 QTRT2Q9H974 415 aaKnown RBP23.79■■□□□ 1.4
LIN28B-202ENST00000635857 TRPC5Q9UL62 973 aaPredicted RBP23.79■■□□□ 1.4
LIN28B-202ENST00000635857 MON2Q7Z3U7 1717 aa23.79■■□□□ 1.4
LIN28B-202ENST00000635857 PLCH1Q4KWH8 1693 aa23.78■■□□□ 1.4
LIN28B-202ENST00000635857 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
LIN28B-202ENST00000635857 CPSF1Q10570 1443 aaKnown RBP23.76■■□□□ 1.39
LIN28B-202ENST00000635857 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
LIN28B-202ENST00000635857 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
LIN28B-202ENST00000635857 COL14A1Q05707 1796 aaKnown RBP23.75■■□□□ 1.39
LIN28B-202ENST00000635857 NRKQ7Z2Y5 1582 aa23.75■■□□□ 1.39
LIN28B-202ENST00000635857 NLRP6P59044 892 aa23.75■■□□□ 1.39
LIN28B-202ENST00000635857 PRDM11Q9NQV5 511 aa23.75■■□□□ 1.39
LIN28B-202ENST00000635857 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
LIN28B-202ENST00000635857 SLC12A5Q9H2X9 1139 aa23.74■■□□□ 1.39
LIN28B-202ENST00000635857 TTC21BQ7Z4L5 1316 aa23.74■■□□□ 1.39
LIN28B-202ENST00000635857 SLIT2O94813 1529 aa23.74■■□□□ 1.39
LIN28B-202ENST00000635857 PIK3C2AO00443 1686 aa23.73■■□□□ 1.39
LIN28B-202ENST00000635857 SOCS7O14512 581 aa23.72■■□□□ 1.39
LIN28B-202ENST00000635857 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
LIN28B-202ENST00000635857 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
LIN28B-202ENST00000635857 BCL9LQ86UU0 1499 aa23.72■■□□□ 1.39
LIN28B-202ENST00000635857 A0A1W2PP64 1363 aa23.71■■□□□ 1.39
LIN28B-202ENST00000635857 USP19O94966 1318 aa23.71■■□□□ 1.39
LIN28B-202ENST00000635857 ATRNO75882 1429 aa23.7■■□□□ 1.38
LIN28B-202ENST00000635857 EDC4Q6P2E9 1401 aaKnown RBP23.7■■□□□ 1.38
LIN28B-202ENST00000635857 CD163L1Q9NR16 1453 aa23.69■■□□□ 1.38
LIN28B-202ENST00000635857 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
LIN28B-202ENST00000635857 KIAA0232Q92628 1395 aa23.69■■□□□ 1.38
LIN28B-202ENST00000635857 FAM83GA6ND36 823 aa23.69■■□□□ 1.38
LIN28B-202ENST00000635857 HSPA5P11021 654 aaKnown RBP23.69■■□□□ 1.38
LIN28B-202ENST00000635857 ZC3H6P61129 1189 aaKnown RBP23.69■■□□□ 1.38
LIN28B-202ENST00000635857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.69■■□□□ 1.38
LIN28B-202ENST00000635857 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
LIN28B-202ENST00000635857 BTG4Q9NY30 223 aa23.68■■□□□ 1.38
LIN28B-202ENST00000635857 GCP02774 474 aa23.67■■□□□ 1.38
LIN28B-202ENST00000635857 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
LIN28B-202ENST00000635857 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
LIN28B-202ENST00000635857 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
LIN28B-202ENST00000635857 SLIT3O75094 1523 aa23.65■■□□□ 1.38
LIN28B-202ENST00000635857 CPDO75976 1380 aa23.65■■□□□ 1.38
LIN28B-202ENST00000635857 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
LIN28B-202ENST00000635857 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.37
LIN28B-202ENST00000635857 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
LIN28B-202ENST00000635857 CHRNA2Q15822 529 aa23.63■■□□□ 1.37
LIN28B-202ENST00000635857 VPS72Q15906 364 aa23.63■■□□□ 1.37
LIN28B-202ENST00000635857 MYOM1P52179 1685 aa23.61■■□□□ 1.37
LIN28B-202ENST00000635857 RGS12O14924 1447 aa23.61■■□□□ 1.37
LIN28B-202ENST00000635857 SOX12O15370 315 aa23.61■■□□□ 1.37
LIN28B-202ENST00000635857 NME9Q86XW9 330 aa23.61■■□□□ 1.37
LIN28B-202ENST00000635857 USP54Q70EL1 1684 aa23.6■■□□□ 1.37
LIN28B-202ENST00000635857 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
LIN28B-202ENST00000635857 EVA1CP58658 441 aa23.59■■□□□ 1.37
LIN28B-202ENST00000635857 STRN4Q9NRL3 753 aa23.59■■□□□ 1.37
LIN28B-202ENST00000635857 GLI3P10071 1580 aa23.57■■□□□ 1.36
LIN28B-202ENST00000635857 A0A0G2JS52 829 aa23.56■■□□□ 1.36
LIN28B-202ENST00000635857 MYT1Q01538 1121 aa23.56■■□□□ 1.36
LIN28B-202ENST00000635857 COG3Q96JB2 828 aa23.56■■□□□ 1.36
LIN28B-202ENST00000635857 LMO7Q8WWI1 1683 aa23.56■■□□□ 1.36
LIN28B-202ENST00000635857 KIF20BQ96Q89 1820 aa23.54■■□□□ 1.36
LIN28B-202ENST00000635857 AATKQ6ZMQ8 1374 aa23.54■■□□□ 1.36
LIN28B-202ENST00000635857 ZRANB1Q9UGI0 708 aa23.54■■□□□ 1.36
LIN28B-202ENST00000635857 NFAT5O94916 1531 aa23.54■■□□□ 1.36
LIN28B-202ENST00000635857 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
LIN28B-202ENST00000635857 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
LIN28B-202ENST00000635857 CAMTA1Q9Y6Y1 1673 aa23.52■■□□□ 1.36
LIN28B-202ENST00000635857 NSD3Q9BZ95 1437 aa23.51■■□□□ 1.35
LIN28B-202ENST00000635857 SPATA31A5Q5VU36 1347 aa23.51■■□□□ 1.35
LIN28B-202ENST00000635857 SPATA31A7Q8IWB4 1347 aa23.51■■□□□ 1.35
LIN28B-202ENST00000635857 COL5A2P05997 1499 aaPredicted RBP23.5■■□□□ 1.35
LIN28B-202ENST00000635857 LTN1O94822 1766 aa23.5■■□□□ 1.35
LIN28B-202ENST00000635857 ABCC6O95255 1503 aa23.5■■□□□ 1.35
LIN28B-202ENST00000635857 ARHGEF25Q86VW2 580 aa23.5■■□□□ 1.35
LIN28B-202ENST00000635857 FAM98CQ17RN3 349 aaKnown RBP23.48■■□□□ 1.35
LIN28B-202ENST00000635857 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
LIN28B-202ENST00000635857 USP35Q9P2H5 1018 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms