RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ALS2Q96Q42 1657 aa26■■□□□ 1.75
CLN6-210ENST00000635747 QRICH2Q9H0J4 1663 aa26■■□□□ 1.75
CLN6-210ENST00000635747 UPF1Q92900 1129 aaKnown RBP eCLIP26■■□□□ 1.75
CLN6-210ENST00000635747 PPIP5K1Q6PFW1 1433 aa25.99■■□□□ 1.75
CLN6-210ENST00000635747 CARD11Q9BXL7 1154 aa25.99■■□□□ 1.75
CLN6-210ENST00000635747 TOPAZ1Q8N9V7 1692 aa25.99■■□□□ 1.75
CLN6-210ENST00000635747 FAM83GA6ND36 823 aa25.98■■□□□ 1.75
CLN6-210ENST00000635747 BRD4O60885 1362 aaPredicted RBP25.97■■□□□ 1.75
CLN6-210ENST00000635747 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.97■■□□□ 1.75
CLN6-210ENST00000635747 VPS72Q15906 364 aa25.96■■□□□ 1.75
CLN6-210ENST00000635747 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
CLN6-210ENST00000635747 ABCA3Q99758 1704 aa25.94■■□□□ 1.74
CLN6-210ENST00000635747 ABTB2Q8N961 1025 aa25.94■■□□□ 1.74
CLN6-210ENST00000635747 RALGAPBQ86X10 1494 aa25.93■■□□□ 1.74
CLN6-210ENST00000635747 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
CLN6-210ENST00000635747 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
CLN6-210ENST00000635747 NWD2Q9ULI1 1742 aa25.91■■□□□ 1.74
CLN6-210ENST00000635747 BTG4Q9NY30 223 aa25.91■■□□□ 1.74
CLN6-210ENST00000635747 CCDC9Q9Y3X0 531 aaKnown RBP25.91■■□□□ 1.74
CLN6-210ENST00000635747 NLRP13Q86W25 1043 aa25.9■■□□□ 1.74
CLN6-210ENST00000635747 ZNF692Q9BU19 519 aaPredicted RBP25.9■■□□□ 1.74
CLN6-210ENST00000635747 PRDM11Q9NQV5 511 aa25.9■■□□□ 1.74
CLN6-210ENST00000635747 NUTM2GQ5VZR2 741 aa25.89■■□□□ 1.74
CLN6-210ENST00000635747 COL14A1Q05707 1796 aaKnown RBP25.87■■□□□ 1.73
CLN6-210ENST00000635747 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
CLN6-210ENST00000635747 PLCH1Q4KWH8 1693 aa25.87■■□□□ 1.73
CLN6-210ENST00000635747 USP6P35125 1406 aa25.86■■□□□ 1.73
CLN6-210ENST00000635747 ONECUT3O60422 494 aaPredicted RBP25.85■■□□□ 1.73
CLN6-210ENST00000635747 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
CLN6-210ENST00000635747 KIAA0232Q92628 1395 aa25.84■■□□□ 1.73
CLN6-210ENST00000635747 GLI3P10071 1580 aa25.84■■□□□ 1.73
CLN6-210ENST00000635747 ZC3H6P61129 1189 aaKnown RBP25.84■■□□□ 1.73
CLN6-210ENST00000635747 TIMELESSQ9UNS1 1208 aa25.84■■□□□ 1.73
CLN6-210ENST00000635747 CRYBG1Q9Y4K1 1723 aa25.84■■□□□ 1.73
CLN6-210ENST00000635747 USP19O94966 1318 aa25.84■■□□□ 1.73
CLN6-210ENST00000635747 EP400Q96L91 3159 aa25.81■■□□□ 1.72
CLN6-210ENST00000635747 NLRP6P59044 892 aa25.81■■□□□ 1.72
CLN6-210ENST00000635747 SEPT12Q8IYM1 358 aa25.81■■□□□ 1.72
CLN6-210ENST00000635747 PUS7Q96PZ0 661 aaKnown RBP25.81■■□□□ 1.72
CLN6-210ENST00000635747 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
CLN6-210ENST00000635747 GCP02774 474 aa25.8■■□□□ 1.72
CLN6-210ENST00000635747 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
CLN6-210ENST00000635747 PHRF1Q9P1Y6 1649 aaKnown RBP25.79■■□□□ 1.72
CLN6-210ENST00000635747 CHRNA2Q15822 529 aa25.79■■□□□ 1.72
CLN6-210ENST00000635747 CPDO75976 1380 aa25.79■■□□□ 1.72
CLN6-210ENST00000635747 SSH2Q76I76 1423 aa25.79■■□□□ 1.72
CLN6-210ENST00000635747 SPATA31A5Q5VU36 1347 aa25.77■■□□□ 1.72
CLN6-210ENST00000635747 SPATA31A7Q8IWB4 1347 aa25.77■■□□□ 1.72
CLN6-210ENST00000635747 TTC21AQ8NDW8 1320 aa25.77■■□□□ 1.72
CLN6-210ENST00000635747 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
CLN6-210ENST00000635747 EVA1CP58658 441 aa25.76■■□□□ 1.71
CLN6-210ENST00000635747 TTC21BQ7Z4L5 1316 aa25.76■■□□□ 1.71
CLN6-210ENST00000635747 CPSF1Q10570 1443 aaKnown RBP25.76■■□□□ 1.71
CLN6-210ENST00000635747 A0A0G2JS52 829 aa25.75■■□□□ 1.71
CLN6-210ENST00000635747 MYT1Q01538 1121 aa25.75■■□□□ 1.71
CLN6-210ENST00000635747 FAM98CQ17RN3 349 aaKnown RBP25.75■■□□□ 1.71
CLN6-210ENST00000635747 KTN1Q86UP2 1357 aaKnown RBP25.74■■□□□ 1.71
CLN6-210ENST00000635747 ST20-MTHFSA0A0A6YYL1 179 aa25.74■■□□□ 1.71
CLN6-210ENST00000635747 NRKQ7Z2Y5 1582 aa25.73■■□□□ 1.71
CLN6-210ENST00000635747 KRT27Q7Z3Y8 459 aa25.73■■□□□ 1.71
CLN6-210ENST00000635747 TMC1Q8TDI8 760 aa25.73■■□□□ 1.71
CLN6-210ENST00000635747 STRN4Q9NRL3 753 aa25.73■■□□□ 1.71
CLN6-210ENST00000635747 HDGFL2Q7Z4V5 671 aaPredicted RBP25.72■■□□□ 1.71
CLN6-210ENST00000635747 SPATA31A1Q5TZJ5 1347 aa25.71■■□□□ 1.71
CLN6-210ENST00000635747 KCNH5Q8NCM2 988 aa25.71■■□□□ 1.71
CLN6-210ENST00000635747 TESK2Q96S53 571 aa25.71■■□□□ 1.71
CLN6-210ENST00000635747 TERF2IPQ9NYB0 399 aa25.7■■□□□ 1.7
CLN6-210ENST00000635747 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
CLN6-210ENST00000635747 SLIT3O75094 1523 aa25.68■■□□□ 1.7
CLN6-210ENST00000635747 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
CLN6-210ENST00000635747 AATKQ6ZMQ8 1374 aa25.67■■□□□ 1.7
CLN6-210ENST00000635747 NINLQ9Y2I6 1382 aa25.67■■□□□ 1.7
CLN6-210ENST00000635747 PIK3C2AO00443 1686 aa25.65■■□□□ 1.7
CLN6-210ENST00000635747 CAMTA1Q9Y6Y1 1673 aa25.65■■□□□ 1.7
CLN6-210ENST00000635747 BLMP54132 1417 aaPredicted RBP25.65■■□□□ 1.7
CLN6-210ENST00000635747 USP47Q96K76 1375 aa25.65■■□□□ 1.7
CLN6-210ENST00000635747 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.7
CLN6-210ENST00000635747 TMF1P82094 1093 aa25.64■■□□□ 1.7
CLN6-210ENST00000635747 SF3B2Q13435 895 aaKnown RBP25.64■■□□□ 1.7
CLN6-210ENST00000635747 LARP1Q6PKG0 1096 aaKnown RBP25.64■■□□□ 1.7
CLN6-210ENST00000635747 BARGINQ6ZT62 677 aa25.64■■□□□ 1.7
CLN6-210ENST00000635747 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
CLN6-210ENST00000635747 BRWD3Q6RI45 1802 aa25.63■■□□□ 1.69
CLN6-210ENST00000635747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.63■■□□□ 1.69
CLN6-210ENST00000635747 LMO7Q8WWI1 1683 aa25.62■■□□□ 1.69
CLN6-210ENST00000635747 CD163L1Q9NR16 1453 aa25.62■■□□□ 1.69
CLN6-210ENST00000635747 ARHGEF25Q86VW2 580 aa25.62■■□□□ 1.69
CLN6-210ENST00000635747 TCP11L2Q8N4U5 519 aa25.62■■□□□ 1.69
CLN6-210ENST00000635747 CCER1Q8TC90 406 aaPredicted RBP25.62■■□□□ 1.69
CLN6-210ENST00000635747 USP35Q9P2H5 1018 aa25.62■■□□□ 1.69
CLN6-210ENST00000635747 EDC4Q6P2E9 1401 aaKnown RBP25.62■■□□□ 1.69
CLN6-210ENST00000635747 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
CLN6-210ENST00000635747 CDCA8Q53HL2 280 aa25.61■■□□□ 1.69
CLN6-210ENST00000635747 MON2Q7Z3U7 1717 aa25.6■■□□□ 1.69
CLN6-210ENST00000635747 COL5A2P05997 1499 aaPredicted RBP25.6■■□□□ 1.69
CLN6-210ENST00000635747 A0A1W2PP64 1363 aa25.58■■□□□ 1.69
CLN6-210ENST00000635747 THSD7AQ9UPZ6 1657 aa25.58■■□□□ 1.68
CLN6-210ENST00000635747 SOX12O15370 315 aa25.57■■□□□ 1.68
CLN6-210ENST00000635747 CRB1P82279 1406 aa25.56■■□□□ 1.68
CLN6-210ENST00000635747 NME9Q86XW9 330 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms