RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NWD2Q9ULI1 1742 aa26.24■■□□□ 1.79
PNKP-224ENST00000631020 HAP1P54257 671 aaPredicted RBP26.24■■□□□ 1.79
PNKP-224ENST00000631020 LMOD2Q6P5Q4 547 aa26.23■■□□□ 1.79
PNKP-224ENST00000631020 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
PNKP-224ENST00000631020 POLR3AO14802 1390 aaPredicted RBP26.23■■□□□ 1.79
PNKP-224ENST00000631020 HSPA5P11021 654 aaKnown RBP26.21■■□□□ 1.79
PNKP-224ENST00000631020 EIF4G2P78344 907 aaKnown RBP eCLIP26.21■■□□□ 1.79
PNKP-224ENST00000631020 UNC5CLQ8IV45 518 aa26.21■■□□□ 1.79
PNKP-224ENST00000631020 CABLES1Q8TDN4 633 aa26.21■■□□□ 1.79
PNKP-224ENST00000631020 UPF1Q92900 1129 aaKnown RBP eCLIP26.21■■□□□ 1.79
PNKP-224ENST00000631020 TESK2Q96S53 571 aa26.2■■□□□ 1.79
PNKP-224ENST00000631020 CRYBG1Q9Y4K1 1723 aa26.2■■□□□ 1.78
PNKP-224ENST00000631020 PLCH1Q4KWH8 1693 aa26.2■■□□□ 1.78
PNKP-224ENST00000631020 PLEKHG3A1L390 1219 aa26.19■■□□□ 1.78
PNKP-224ENST00000631020 GJD4Q96KN9 370 aaPredicted RBP26.18■■□□□ 1.78
PNKP-224ENST00000631020 SBNO2Q9Y2G9 1366 aa26.15■■□□□ 1.78
PNKP-224ENST00000631020 ACEP12821 1306 aa26.15■■□□□ 1.78
PNKP-224ENST00000631020 GLI3P10071 1580 aa26.14■■□□□ 1.77
PNKP-224ENST00000631020 COL14A1Q05707 1796 aaKnown RBP26.14■■□□□ 1.77
PNKP-224ENST00000631020 SRPK2P78362 688 aaKnown RBP26.14■■□□□ 1.77
PNKP-224ENST00000631020 PAK3O75914 559 aaPredicted RBP26.13■■□□□ 1.77
PNKP-224ENST00000631020 ATAD2Q6PL18 1390 aa26.12■■□□□ 1.77
PNKP-224ENST00000631020 PPIP5K1Q6PFW1 1433 aa26.11■■□□□ 1.77
PNKP-224ENST00000631020 BRD4O60885 1362 aaPredicted RBP26.11■■□□□ 1.77
PNKP-224ENST00000631020 VPS72Q15906 364 aa26.11■■□□□ 1.77
PNKP-224ENST00000631020 NRAPQ86VF7 1730 aa26.1■■□□□ 1.77
PNKP-224ENST00000631020 FAM83GA6ND36 823 aa26.1■■□□□ 1.77
PNKP-224ENST00000631020 PHRF1Q9P1Y6 1649 aaKnown RBP26.1■■□□□ 1.77
PNKP-224ENST00000631020 EVC2Q86UK5 1308 aa26.09■■□□□ 1.77
PNKP-224ENST00000631020 PLEKHG5O94827 1062 aa26.09■■□□□ 1.77
PNKP-224ENST00000631020 CABP2Q9NPB3 220 aa26.09■■□□□ 1.77
PNKP-224ENST00000631020 ONECUT3O60422 494 aaPredicted RBP26.04■■□□□ 1.76
PNKP-224ENST00000631020 SLC24A1O60721 1099 aa26.04■■□□□ 1.76
PNKP-224ENST00000631020 EP400Q96L91 3159 aa26.03■■□□□ 1.76
PNKP-224ENST00000631020 TMF1P82094 1093 aa26.03■■□□□ 1.76
PNKP-224ENST00000631020 BTG4Q9NY30 223 aa26.03■■□□□ 1.76
PNKP-224ENST00000631020 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
PNKP-224ENST00000631020 USP6P35125 1406 aa26■■□□□ 1.75
PNKP-224ENST00000631020 ABTB2Q8N961 1025 aa26■■□□□ 1.75
PNKP-224ENST00000631020 PRDM11Q9NQV5 511 aa26■■□□□ 1.75
PNKP-224ENST00000631020 CABP1Q9NZU7 370 aa26■■□□□ 1.75
PNKP-224ENST00000631020 BRWD3Q6RI45 1802 aa26■■□□□ 1.75
PNKP-224ENST00000631020 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
PNKP-224ENST00000631020 USP19O94966 1318 aa25.99■■□□□ 1.75
PNKP-224ENST00000631020 KIAA0232Q92628 1395 aa25.99■■□□□ 1.75
PNKP-224ENST00000631020 CCDC9Q9Y3X0 531 aaKnown RBP25.98■■□□□ 1.75
PNKP-224ENST00000631020 NLRP13Q86W25 1043 aa25.97■■□□□ 1.75
PNKP-224ENST00000631020 CCDC125Q86Z20 511 aa25.97■■□□□ 1.75
PNKP-224ENST00000631020 PUS7Q96PZ0 661 aaKnown RBP25.97■■□□□ 1.75
PNKP-224ENST00000631020 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
PNKP-224ENST00000631020 CPDO75976 1380 aa25.96■■□□□ 1.75
PNKP-224ENST00000631020 AKAP12Q02952 1782 aa25.96■■□□□ 1.75
PNKP-224ENST00000631020 NUTM2GQ5VZR2 741 aa25.95■■□□□ 1.74
PNKP-224ENST00000631020 SEPT12Q8IYM1 358 aa25.95■■□□□ 1.74
PNKP-224ENST00000631020 ZNF692Q9BU19 519 aaPredicted RBP25.94■■□□□ 1.74
PNKP-224ENST00000631020 SPATA31A5Q5VU36 1347 aa25.93■■□□□ 1.74
PNKP-224ENST00000631020 SPATA31A7Q8IWB4 1347 aa25.93■■□□□ 1.74
PNKP-224ENST00000631020 CDCA8Q53HL2 280 aa25.92■■□□□ 1.74
PNKP-224ENST00000631020 ZC3H6P61129 1189 aaKnown RBP25.91■■□□□ 1.74
PNKP-224ENST00000631020 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
PNKP-224ENST00000631020 CPSF1Q10570 1443 aaKnown RBP25.91■■□□□ 1.74
PNKP-224ENST00000631020 SLIT3O75094 1523 aa25.91■■□□□ 1.74
PNKP-224ENST00000631020 PIK3C2AO00443 1686 aa25.9■■□□□ 1.74
PNKP-224ENST00000631020 GCP02774 474 aa25.9■■□□□ 1.74
PNKP-224ENST00000631020 KIF7Q2M1P5 1343 aa25.89■■□□□ 1.73
PNKP-224ENST00000631020 SLC12A5Q9H2X9 1139 aa25.88■■□□□ 1.73
PNKP-224ENST00000631020 THSD7AQ9UPZ6 1657 aa25.88■■□□□ 1.73
PNKP-224ENST00000631020 CHRNA2Q15822 529 aa25.88■■□□□ 1.73
PNKP-224ENST00000631020 KRT27Q7Z3Y8 459 aa25.88■■□□□ 1.73
PNKP-224ENST00000631020 MON2Q7Z3U7 1717 aa25.87■■□□□ 1.73
PNKP-224ENST00000631020 BLMP54132 1417 aaPredicted RBP25.87■■□□□ 1.73
PNKP-224ENST00000631020 FAM98CQ17RN3 349 aaKnown RBP25.87■■□□□ 1.73
PNKP-224ENST00000631020 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
PNKP-224ENST00000631020 WASHC2AQ641Q2 1341 aa25.87■■□□□ 1.73
PNKP-224ENST00000631020 TTC21AQ8NDW8 1320 aa25.87■■□□□ 1.73
PNKP-224ENST00000631020 CAMTA1Q9Y6Y1 1673 aa25.86■■□□□ 1.73
PNKP-224ENST00000631020 NLRP6P59044 892 aa25.86■■□□□ 1.73
PNKP-224ENST00000631020 TMC1Q8TDI8 760 aa25.86■■□□□ 1.73
PNKP-224ENST00000631020 SPATA31A1Q5TZJ5 1347 aa25.86■■□□□ 1.73
PNKP-224ENST00000631020 TTC21BQ7Z4L5 1316 aa25.85■■□□□ 1.73
PNKP-224ENST00000631020 CCDC7Q96M83 1385 aa25.84■■□□□ 1.73
PNKP-224ENST00000631020 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
PNKP-224ENST00000631020 A0A0G2JS52 829 aa25.82■■□□□ 1.72
PNKP-224ENST00000631020 MYT1Q01538 1121 aa25.82■■□□□ 1.72
PNKP-224ENST00000631020 STRN4Q9NRL3 753 aa25.81■■□□□ 1.72
PNKP-224ENST00000631020 EVA1CP58658 441 aa25.8■■□□□ 1.72
PNKP-224ENST00000631020 AATKQ6ZMQ8 1374 aa25.8■■□□□ 1.72
PNKP-224ENST00000631020 CD163L1Q9NR16 1453 aa25.8■■□□□ 1.72
PNKP-224ENST00000631020 USP54Q70EL1 1684 aa25.79■■□□□ 1.72
PNKP-224ENST00000631020 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
PNKP-224ENST00000631020 NINLQ9Y2I6 1382 aa25.79■■□□□ 1.72
PNKP-224ENST00000631020 BARGINQ6ZT62 677 aa25.78■■□□□ 1.72
PNKP-224ENST00000631020 KCNH5Q8NCM2 988 aa25.78■■□□□ 1.72
PNKP-224ENST00000631020 MYOM1P52179 1685 aa25.78■■□□□ 1.72
PNKP-224ENST00000631020 COL18A1P39060 1754 aa25.78■■□□□ 1.72
PNKP-224ENST00000631020 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
PNKP-224ENST00000631020 SF3B2Q13435 895 aaKnown RBP25.75■■□□□ 1.71
PNKP-224ENST00000631020 ZNF316A6NFI3 1004 aaPredicted RBP25.74■■□□□ 1.71
PNKP-224ENST00000631020 LARP1Q6PKG0 1096 aaKnown RBP25.74■■□□□ 1.71
PNKP-224ENST00000631020 HDGFL2Q7Z4V5 671 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms