RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 PPIP5K1Q6PFW1 1433 aa30.4■■■□□ 2.46
RAB28-208ENST00000630951 CLSPNQ9HAW4 1339 aa30.38■■■□□ 2.45
RAB28-208ENST00000630951 PLEKHG5O94827 1062 aa30.38■■■□□ 2.45
RAB28-208ENST00000630951 ATRNO75882 1429 aa30.38■■■□□ 2.45
RAB28-208ENST00000630951 SLIT2O94813 1529 aa30.37■■■□□ 2.45
RAB28-208ENST00000630951 ABCA3Q99758 1704 aa30.36■■■□□ 2.45
RAB28-208ENST00000630951 SBNO2Q9Y2G9 1366 aa30.36■■■□□ 2.45
RAB28-208ENST00000630951 UNC5CLQ8IV45 518 aa30.35■■■□□ 2.45
RAB28-208ENST00000630951 CABP1Q9NZU7 370 aa30.34■■■□□ 2.45
RAB28-208ENST00000630951 TIMELESSQ9UNS1 1208 aa30.31■■■□□ 2.44
RAB28-208ENST00000630951 BRD4O60885 1362 aaPredicted RBP30.31■■■□□ 2.44
RAB28-208ENST00000630951 RGS12O14924 1447 aa30.3■■■□□ 2.44
RAB28-208ENST00000630951 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.3■■■□□ 2.44
RAB28-208ENST00000630951 FAM83GA6ND36 823 aa30.3■■■□□ 2.44
RAB28-208ENST00000630951 GJD4Q96KN9 370 aaPredicted RBP30.29■■■□□ 2.44
RAB28-208ENST00000630951 ATAD2Q6PL18 1390 aa30.27■■■□□ 2.44
RAB28-208ENST00000630951 ABTB2Q8N961 1025 aa30.27■■■□□ 2.44
RAB28-208ENST00000630951 CRYBG1Q9Y4K1 1723 aa30.26■■■□□ 2.43
RAB28-208ENST00000630951 NWD2Q9ULI1 1742 aa30.25■■■□□ 2.43
RAB28-208ENST00000630951 USP6P35125 1406 aa30.24■■■□□ 2.43
RAB28-208ENST00000630951 NUTM2GQ5VZR2 741 aa30.23■■■□□ 2.43
RAB28-208ENST00000630951 ZNF692Q9BU19 519 aaPredicted RBP30.23■■■□□ 2.43
RAB28-208ENST00000630951 PLCH1Q4KWH8 1693 aa30.22■■■□□ 2.43
RAB28-208ENST00000630951 VPS72Q15906 364 aa30.22■■■□□ 2.43
RAB28-208ENST00000630951 NLRP13Q86W25 1043 aa30.2■■■□□ 2.42
RAB28-208ENST00000630951 PRDM11Q9NQV5 511 aa30.2■■■□□ 2.42
RAB28-208ENST00000630951 BTG4Q9NY30 223 aa30.2■■■□□ 2.42
RAB28-208ENST00000630951 COL14A1Q05707 1796 aaKnown RBP30.19■■■□□ 2.42
RAB28-208ENST00000630951 SSH2Q76I76 1423 aa30.18■■■□□ 2.42
RAB28-208ENST00000630951 SLC24A1O60721 1099 aa30.18■■■□□ 2.42
RAB28-208ENST00000630951 USP19O94966 1318 aa30.18■■■□□ 2.42
RAB28-208ENST00000630951 ST20-MTHFSA0A0A6YYL1 179 aa30.17■■■□□ 2.42
RAB28-208ENST00000630951 UPF1Q92900 1129 aaKnown RBP eCLIP30.17■■■□□ 2.42
RAB28-208ENST00000630951 PUS7Q96PZ0 661 aaKnown RBP30.17■■■□□ 2.42
RAB28-208ENST00000630951 KIAA0232Q92628 1395 aa30.17■■■□□ 2.42
RAB28-208ENST00000630951 PHRF1Q9P1Y6 1649 aaKnown RBP30.17■■■□□ 2.42
RAB28-208ENST00000630951 TESK2Q96S53 571 aa30.16■■■□□ 2.42
RAB28-208ENST00000630951 GLI3P10071 1580 aa30.15■■■□□ 2.42
RAB28-208ENST00000630951 CPSF1Q10570 1443 aaKnown RBP30.15■■■□□ 2.42
RAB28-208ENST00000630951 ZC3H6P61129 1189 aaKnown RBP30.14■■■□□ 2.41
RAB28-208ENST00000630951 CCER1Q8TC90 406 aaPredicted RBP30.14■■■□□ 2.41
RAB28-208ENST00000630951 CCDC9Q9Y3X0 531 aaKnown RBP30.13■■■□□ 2.41
RAB28-208ENST00000630951 GCP02774 474 aa30.12■■■□□ 2.41
RAB28-208ENST00000630951 NLRP6P59044 892 aa30.12■■■□□ 2.41
RAB28-208ENST00000630951 NRAPQ86VF7 1730 aa30.11■■■□□ 2.41
RAB28-208ENST00000630951 CPDO75976 1380 aa30.11■■■□□ 2.41
RAB28-208ENST00000630951 AKAP12Q02952 1782 aa30.11■■■□□ 2.41
RAB28-208ENST00000630951 ONECUT3O60422 494 aaPredicted RBP30.11■■■□□ 2.41
RAB28-208ENST00000630951 TTC21BQ7Z4L5 1316 aa30.1■■■□□ 2.41
RAB28-208ENST00000630951 KTN1Q86UP2 1357 aaKnown RBP30.1■■■□□ 2.41
RAB28-208ENST00000630951 NRKQ7Z2Y5 1582 aa30.1■■■□□ 2.41
RAB28-208ENST00000630951 CHRNA2Q15822 529 aa30.09■■■□□ 2.41
RAB28-208ENST00000630951 TTC21AQ8NDW8 1320 aa30.09■■■□□ 2.41
RAB28-208ENST00000630951 USP47Q96K76 1375 aa30.09■■■□□ 2.41
RAB28-208ENST00000630951 TMC1Q8TDI8 760 aa30.07■■■□□ 2.41
RAB28-208ENST00000630951 SLC12A5Q9H2X9 1139 aa30.06■■■□□ 2.4
RAB28-208ENST00000630951 PIK3C2AO00443 1686 aa30.05■■■□□ 2.4
RAB28-208ENST00000630951 SEPT12Q8IYM1 358 aa30.04■■■□□ 2.4
RAB28-208ENST00000630951 CD163L1Q9NR16 1453 aa30.04■■■□□ 2.4
RAB28-208ENST00000630951 SPATA31A5Q5VU36 1347 aa30.04■■■□□ 2.4
RAB28-208ENST00000630951 SPATA31A7Q8IWB4 1347 aa30.04■■■□□ 2.4
RAB28-208ENST00000630951 SLIT3O75094 1523 aa30.03■■■□□ 2.4
RAB28-208ENST00000630951 HDGFL2Q7Z4V5 671 aaPredicted RBP30.03■■■□□ 2.4
RAB28-208ENST00000630951 TERF2IPQ9NYB0 399 aa30.03■■■□□ 2.4
RAB28-208ENST00000630951 NINLQ9Y2I6 1382 aa30.03■■■□□ 2.4
RAB28-208ENST00000630951 MON2Q7Z3U7 1717 aa30.02■■■□□ 2.4
RAB28-208ENST00000630951 EP400Q96L91 3159 aa30.01■■■□□ 2.39
RAB28-208ENST00000630951 TMF1P82094 1093 aa30.01■■■□□ 2.39
RAB28-208ENST00000630951 KCNH5Q8NCM2 988 aa29.99■■■□□ 2.39
RAB28-208ENST00000630951 STRN4Q9NRL3 753 aa29.99■■■□□ 2.39
RAB28-208ENST00000630951 EVA1CP58658 441 aa29.98■■■□□ 2.39
RAB28-208ENST00000630951 FAM98CQ17RN3 349 aaKnown RBP29.98■■■□□ 2.39
RAB28-208ENST00000630951 CAMTA1Q9Y6Y1 1673 aa29.98■■■□□ 2.39
RAB28-208ENST00000630951 LMO7Q8WWI1 1683 aa29.97■■■□□ 2.39
RAB28-208ENST00000630951 SPATA31A1Q5TZJ5 1347 aa29.97■■■□□ 2.39
RAB28-208ENST00000630951 A0A1W2PP64 1363 aa29.96■■■□□ 2.39
RAB28-208ENST00000630951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.96■■■□□ 2.393e-7■■■■□ 22.8
RAB28-208ENST00000630951 AATKQ6ZMQ8 1374 aa29.96■■■□□ 2.39
RAB28-208ENST00000630951 EDC4Q6P2E9 1401 aaKnown RBP29.95■■■□□ 2.39
RAB28-208ENST00000630951 USP31Q70CQ4 1352 aa29.95■■■□□ 2.38
RAB28-208ENST00000630951 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
RAB28-208ENST00000630951 A0A0G2JS52 829 aa29.93■■■□□ 2.38
RAB28-208ENST00000630951 MYT1Q01538 1121 aa29.93■■■□□ 2.38
RAB28-208ENST00000630951 KRT27Q7Z3Y8 459 aa29.93■■■□□ 2.38
RAB28-208ENST00000630951 CCDC125Q86Z20 511 aa29.93■■■□□ 2.38
RAB28-208ENST00000630951 BRWD3Q6RI45 1802 aa29.93■■■□□ 2.38
RAB28-208ENST00000630951 ARHGEF25Q86VW2 580 aa29.91■■■□□ 2.38
RAB28-208ENST00000630951 LARP1Q6PKG0 1096 aaKnown RBP29.91■■■□□ 2.38
RAB28-208ENST00000630951 NME9Q86XW9 330 aa29.91■■■□□ 2.38
RAB28-208ENST00000630951 COL5A2P05997 1499 aaPredicted RBP29.9■■■□□ 2.38
RAB28-208ENST00000630951 ZBTB7CA1YPR0 619 aa29.89■■■□□ 2.38
RAB28-208ENST00000630951 ZRANB1Q9UGI0 708 aa29.88■■■□□ 2.37
RAB28-208ENST00000630951 BARGINQ6ZT62 677 aa29.88■■■□□ 2.37
RAB28-208ENST00000630951 SOX12O15370 315 aa29.87■■■□□ 2.37
RAB28-208ENST00000630951 USP35Q9P2H5 1018 aa29.87■■■□□ 2.37
RAB28-208ENST00000630951 USP54Q70EL1 1684 aa29.87■■■□□ 2.37
RAB28-208ENST00000630951 ANKRD36BQ8N2N9 1353 aa29.86■■■□□ 2.37
RAB28-208ENST00000630951 NFAT5O94916 1531 aa29.86■■■□□ 2.37
RAB28-208ENST00000630951 THSD7AQ9UPZ6 1657 aa29.86■■■□□ 2.37
RAB28-208ENST00000630951 TCP11L2Q8N4U5 519 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms