RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 TSPYL4Q9UJ04 414 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 PANK3Q9H999 370 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 SERPINC1P01008 464 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
GABRB3-216ENST00000628124 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.71
GABRB3-216ENST00000628124 HMGB2P26583 209 aaKnown RBP10.59□□□□□ -0.71
GABRB3-216ENST00000628124 RIPK4P57078 832 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 SOGA3Q5TF21 947 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 GNAI3P08754 354 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 NOL7Q9UMY1 257 aaKnown RBP10.59□□□□□ -0.71
GABRB3-216ENST00000628124 NACAP1Q9BZK3 213 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
GABRB3-216ENST00000628124 TANGO6Q9C0B7 1094 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
GABRB3-216ENST00000628124 TAF4BQ92750 862 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 SEPT11Q9NVA2 429 aaKnown RBP10.58□□□□□ -0.72
GABRB3-216ENST00000628124 ANKRD1Q15327 319 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 GOLGA6L10A0A0M3HER8 536 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 AEBP1Q8IUX7 1158 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 L3MBTL2Q969R5 705 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
GABRB3-216ENST00000628124 CUX2O14529 1486 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 ZBED9Q6R2W3 1325 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 ATP2B1P20020 1258 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 FANCIQ9NVI1 1328 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC192P0DO97 292 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 NUTM2DQ5VT03 806 aaPredicted RBP10.57□□□□□ -0.72
GABRB3-216ENST00000628124 EXOC6Q8TAG9 804 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 MPHOSPH10O00566 681 aaKnown RBP10.57□□□□□ -0.72
GABRB3-216ENST00000628124 FMNL2Q96PY5 1086 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
GABRB3-216ENST00000628124 NF2P35240 595 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 LRRCC1Q9C099 1032 aa10.57□□□□□ -0.72
GABRB3-216ENST00000628124 EPB41L2O43491 1005 aaKnown RBP10.56□□□□□ -0.72
GABRB3-216ENST00000628124 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 RAB3GAP2Q9H2M9 1393 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC158Q5M9N0 1113 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 NECTIN2Q92692 538 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 CENPHQ9H3R5 247 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-216ENST00000628124 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
GABRB3-216ENST00000628124 GIMAP7Q8NHV1 300 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 ZHX3Q9H4I2 956 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 APAF1O14727 1248 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 CDKL5O76039 1030 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 ANAPC15P60006 121 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 ZSCAN25Q6NSZ9 544 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
GABRB3-216ENST00000628124 MAP2K1Q02750 393 aaPredicted RBP10.55□□□□□ -0.72
GABRB3-216ENST00000628124 SPATA24Q86W54 205 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 PLIN1O60240 522 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC18Q5T9S5 1454 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 ATF3P18847 181 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 PHF23Q9BUL5 403 aaPredicted RBP10.54□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 CEP63Q96MT8 703 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
GABRB3-216ENST00000628124 WDHD1O75717 1129 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
GABRB3-216ENST00000628124 ST20-MTHFSA0A0A6YYL1 179 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
GABRB3-216ENST00000628124 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-216ENST00000628124 CCDC69A6NI79 296 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 MCM3P25205 808 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 AIMP1Q12904 312 aaKnown RBP10.53□□□□□ -0.72
GABRB3-216ENST00000628124 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
GABRB3-216ENST00000628124 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.72
GABRB3-216ENST00000628124 MINK1Q8N4C8 1332 aaPredicted RBP10.52□□□□□ -0.72
GABRB3-216ENST00000628124 KIF2AO00139 706 aaPredicted RBP10.52□□□□□ -0.72
GABRB3-216ENST00000628124 TNMDQ9H2S6 317 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 SMTNL1A8MU46 457 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
GABRB3-216ENST00000628124 KRT85P78386 507 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 SF3B2Q13435 895 aaKnown RBP10.52□□□□□ -0.73
GABRB3-216ENST00000628124 WASF1Q92558 559 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
GABRB3-216ENST00000628124 TRAK2O60296 914 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 HNRNPMP52272 730 aaKnown RBP eCLIP10.52□□□□□ -0.73
GABRB3-216ENST00000628124 MAP9Q49MG5 647 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
GABRB3-216ENST00000628124 SURF6O75683 361 aaKnown RBP10.51□□□□□ -0.73
GABRB3-216ENST00000628124 TNIP1Q15025 636 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 CEP57L1Q8IYX8 460 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 CRACR2AQ9BSW2 395 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms