RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 SLC12A5Q9H2X9 1139 aa26.46■■□□□ 1.83
CNOT9-209ENST00000627282 ACEP12821 1306 aa26.46■■□□□ 1.83
CNOT9-209ENST00000627282 TMC1Q8TDI8 760 aa26.45■■□□□ 1.82
CNOT9-209ENST00000627282 C8orf37Q96NL8 207 aa26.45■■□□□ 1.82
CNOT9-209ENST00000627282 KIF7Q2M1P5 1343 aa26.45■■□□□ 1.82
CNOT9-209ENST00000627282 NGDNQ8NEJ9 315 aaKnown RBP26.44■■□□□ 1.82
CNOT9-209ENST00000627282 AFF2P51816 1311 aa26.44■■□□□ 1.82
CNOT9-209ENST00000627282 POLR3GLQ9BT43 218 aa26.43■■□□□ 1.82
CNOT9-209ENST00000627282 CD163L1Q9NR16 1453 aa26.42■■□□□ 1.82
CNOT9-209ENST00000627282 NINLQ9Y2I6 1382 aa26.42■■□□□ 1.82
CNOT9-209ENST00000627282 TRPM3Q9HCF6 1732 aaPredicted RBP26.42■■□□□ 1.82
CNOT9-209ENST00000627282 ARHGEF10O15013 1369 aa26.41■■□□□ 1.82
CNOT9-209ENST00000627282 MYOM1P52179 1685 aa26.41■■□□□ 1.82
CNOT9-209ENST00000627282 WASHC2AQ641Q2 1341 aa26.4■■□□□ 1.82
CNOT9-209ENST00000627282 DDX10Q13206 875 aaKnown RBP26.4■■□□□ 1.82
CNOT9-209ENST00000627282 CPSF1Q10570 1443 aaKnown RBP26.4■■□□□ 1.82
CNOT9-209ENST00000627282 CCDC7Q96M83 1385 aa26.4■■□□□ 1.82
CNOT9-209ENST00000627282 NGLY1Q96IV0 654 aa26.39■■□□□ 1.82
CNOT9-209ENST00000627282 LMOD2Q6P5Q4 547 aa26.36■■□□□ 1.81
CNOT9-209ENST00000627282 AKAP12Q02952 1782 aa26.36■■□□□ 1.81
CNOT9-209ENST00000627282 A0A1W2PP64 1363 aa26.36■■□□□ 1.81
CNOT9-209ENST00000627282 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
CNOT9-209ENST00000627282 ALS2Q96Q42 1657 aa26.36■■□□□ 1.81
CNOT9-209ENST00000627282 USP6P35125 1406 aa26.35■■□□□ 1.81
CNOT9-209ENST00000627282 FNBP4Q8N3X1 1017 aaPredicted RBP26.34■■□□□ 1.81
CNOT9-209ENST00000627282 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
CNOT9-209ENST00000627282 ANKRD36BQ8N2N9 1353 aa26.34■■□□□ 1.81
CNOT9-209ENST00000627282 TERF2IPQ9NYB0 399 aa26.33■■□□□ 1.81
CNOT9-209ENST00000627282 SSH2Q76I76 1423 aa26.33■■□□□ 1.8
CNOT9-209ENST00000627282 HDGFL2Q7Z4V5 671 aaPredicted RBP26.32■■□□□ 1.8
CNOT9-209ENST00000627282 CABLES1Q8TDN4 633 aa26.32■■□□□ 1.8
CNOT9-209ENST00000627282 KTN1Q86UP2 1357 aaKnown RBP26.32■■□□□ 1.8
CNOT9-209ENST00000627282 ABCA3Q99758 1704 aa26.32■■□□□ 1.8
CNOT9-209ENST00000627282 MON2Q7Z3U7 1717 aa26.31■■□□□ 1.8
CNOT9-209ENST00000627282 PAK3O75914 559 aaPredicted RBP26.3■■□□□ 1.8
CNOT9-209ENST00000627282 HAP1P54257 671 aaPredicted RBP26.3■■□□□ 1.8
CNOT9-209ENST00000627282 USP21Q9UK80 565 aa26.3■■□□□ 1.8
CNOT9-209ENST00000627282 RXRBP28702 533 aa26.29■■□□□ 1.8
CNOT9-209ENST00000627282 QTRT2Q9H974 415 aaKnown RBP26.29■■□□□ 1.8
CNOT9-209ENST00000627282 NRKQ7Z2Y5 1582 aa26.28■■□□□ 1.8
CNOT9-209ENST00000627282 BRD4O60885 1362 aaPredicted RBP26.28■■□□□ 1.8
CNOT9-209ENST00000627282 PLEKHG5O94827 1062 aa26.28■■□□□ 1.8
CNOT9-209ENST00000627282 CARD14Q9BXL6 1004 aa26.27■■□□□ 1.8
CNOT9-209ENST00000627282 EDC4Q6P2E9 1401 aaKnown RBP26.26■■□□□ 1.79
CNOT9-209ENST00000627282 BCL9LQ86UU0 1499 aa26.26■■□□□ 1.79
CNOT9-209ENST00000627282 TTC21BQ7Z4L5 1316 aa26.26■■□□□ 1.79
CNOT9-209ENST00000627282 CDK12Q9NYV4 1490 aaPredicted RBP26.25■■□□□ 1.79
CNOT9-209ENST00000627282 PANK3Q9H999 370 aa26.25■■□□□ 1.79
CNOT9-209ENST00000627282 SLIT2O94813 1529 aa26.24■■□□□ 1.79
CNOT9-209ENST00000627282 RBM6P78332 1123 aaKnown RBP26.24■■□□□ 1.79
CNOT9-209ENST00000627282 TRPC5Q9UL62 973 aaPredicted RBP26.24■■□□□ 1.79
CNOT9-209ENST00000627282 ATRNO75882 1429 aa26.23■■□□□ 1.79
CNOT9-209ENST00000627282 CRYBG1Q9Y4K1 1723 aa26.23■■□□□ 1.79
CNOT9-209ENST00000627282 CENPBP07199 599 aaPredicted RBP26.22■■□□□ 1.79
CNOT9-209ENST00000627282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.22■■□□□ 1.79
CNOT9-209ENST00000627282 NSD3Q9BZ95 1437 aa26.21■■□□□ 1.79
CNOT9-209ENST00000627282 TTC21AQ8NDW8 1320 aa26.21■■□□□ 1.79
CNOT9-209ENST00000627282 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.2■■□□□ 1.78
CNOT9-209ENST00000627282 ABTB2Q8N961 1025 aa26.2■■□□□ 1.78
CNOT9-209ENST00000627282 PIK3C2AO00443 1686 aa26.2■■□□□ 1.78
CNOT9-209ENST00000627282 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
CNOT9-209ENST00000627282 PLCH1Q4KWH8 1693 aa26.18■■□□□ 1.78
CNOT9-209ENST00000627282 NME9Q86XW9 330 aa26.17■■□□□ 1.78
CNOT9-209ENST00000627282 UNC5CLQ8IV45 518 aa26.17■■□□□ 1.78
CNOT9-209ENST00000627282 FAM83GA6ND36 823 aa26.17■■□□□ 1.78
CNOT9-209ENST00000627282 NWD2Q9ULI1 1742 aa26.17■■□□□ 1.78
CNOT9-209ENST00000627282 RGS12O14924 1447 aa26.16■■□□□ 1.78
CNOT9-209ENST00000627282 ZRANB1Q9UGI0 708 aa26.16■■□□□ 1.78
CNOT9-209ENST00000627282 PHRF1Q9P1Y6 1649 aaKnown RBP26.15■■□□□ 1.78
CNOT9-209ENST00000627282 PER1O15534 1290 aaPredicted RBP26.14■■□□□ 1.77
CNOT9-209ENST00000627282 ANP32CO43423 234 aa26.14■■□□□ 1.77
CNOT9-209ENST00000627282 NLRP6P59044 892 aa26.14■■□□□ 1.77
CNOT9-209ENST00000627282 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
CNOT9-209ENST00000627282 COL14A1Q05707 1796 aaKnown RBP26.13■■□□□ 1.77
CNOT9-209ENST00000627282 FYB1O15117 783 aa26.13■■□□□ 1.77
CNOT9-209ENST00000627282 USP31Q70CQ4 1352 aa26.13■■□□□ 1.77
CNOT9-209ENST00000627282 USP19O94966 1318 aa26.12■■□□□ 1.77
CNOT9-209ENST00000627282 NLRP13Q86W25 1043 aa26.11■■□□□ 1.77
CNOT9-209ENST00000627282 GJD4Q96KN9 370 aaPredicted RBP26.11■■□□□ 1.77
CNOT9-209ENST00000627282 OVOS2A0A0J9YW53 1432 aa26.1■■□□□ 1.77
CNOT9-209ENST00000627282 OVOS2Q6IE36 1432 aa26.1■■□□□ 1.77
CNOT9-209ENST00000627282 CGNL1Q0VF96 1302 aa26.1■■□□□ 1.77
CNOT9-209ENST00000627282 PRDM11Q9NQV5 511 aa26.1■■□□□ 1.77
CNOT9-209ENST00000627282 KIAA0232Q92628 1395 aa26.09■■□□□ 1.77
CNOT9-209ENST00000627282 GGNBP2Q9H3C7 697 aa26.09■■□□□ 1.77
CNOT9-209ENST00000627282 KNSTRNQ9Y448 316 aa26.09■■□□□ 1.77
CNOT9-209ENST00000627282 USP54Q70EL1 1684 aa26.09■■□□□ 1.77
CNOT9-209ENST00000627282 VPS72Q15906 364 aa26.08■■□□□ 1.77
CNOT9-209ENST00000627282 KIF20BQ96Q89 1820 aa26.08■■□□□ 1.76
CNOT9-209ENST00000627282 NRAPQ86VF7 1730 aa26.07■■□□□ 1.76
CNOT9-209ENST00000627282 GLI3P10071 1580 aa26.07■■□□□ 1.76
CNOT9-209ENST00000627282 CCER2I3L3R5 266 aa26.07■■□□□ 1.76
CNOT9-209ENST00000627282 BTG4Q9NY30 223 aa26.07■■□□□ 1.76
CNOT9-209ENST00000627282 SLIT3O75094 1523 aa26.07■■□□□ 1.76
CNOT9-209ENST00000627282 AMER1Q5JTC6 1135 aaPredicted RBP26.06■■□□□ 1.76
CNOT9-209ENST00000627282 ZC3H6P61129 1189 aaKnown RBP26.06■■□□□ 1.76
CNOT9-209ENST00000627282 COG3Q96JB2 828 aa26.04■■□□□ 1.76
CNOT9-209ENST00000627282 CPDO75976 1380 aa26.04■■□□□ 1.76
CNOT9-209ENST00000627282 GCP02774 474 aa26.03■■□□□ 1.76
CNOT9-209ENST00000627282 CHRNA2Q15822 529 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms