RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 GRIPAP1Q4V328 841 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 MPHOSPH8Q99549 860 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
CHD2-208ENST00000626874 NOL7Q9UMY1 257 aaKnown RBP8.22□□□□□ -1.09
CHD2-208ENST00000626874 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
CHD2-208ENST00000626874 RIPK4P57078 832 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 ABTB2Q8N961 1025 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 MAP7D2Q96T17 732 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 RAB3GAP2Q9H2M9 1393 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 DRC1Q96MC2 740 aa8.22□□□□□ -1.09
CHD2-208ENST00000626874 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
CHD2-208ENST00000626874 DEF6Q9H4E7 631 aa8.21□□□□□ -1.09
CHD2-208ENST00000626874 TTC39AQ5SRH9 613 aa8.21□□□□□ -1.09
CHD2-208ENST00000626874 KINO60870 393 aaKnown RBP8.21□□□□□ -1.1
CHD2-208ENST00000626874 NLRP6P59044 892 aa8.21□□□□□ -1.1
CHD2-208ENST00000626874 HMGB1P09429 215 aaKnown RBP8.21□□□□□ -1.1
CHD2-208ENST00000626874 ANKLE2Q86XL3 938 aa8.21□□□□□ -1.1
CHD2-208ENST00000626874 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.1
CHD2-208ENST00000626874 SDF4Q9BRK5 362 aa8.21□□□□□ -1.1
CHD2-208ENST00000626874 WASF1Q92558 559 aa8.2□□□□□ -1.1
CHD2-208ENST00000626874 PPM1FP49593 454 aaPredicted RBP8.2□□□□□ -1.1
CHD2-208ENST00000626874 CABP4P57796 275 aa8.2□□□□□ -1.1
CHD2-208ENST00000626874 HSP90AA2PQ14568 343 aaPredicted RBP8.2□□□□□ -1.1
CHD2-208ENST00000626874 PANK3Q9H999 370 aa8.2□□□□□ -1.1
CHD2-208ENST00000626874 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
CHD2-208ENST00000626874 FANCD2Q9BXW9 1451 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 STARD3NLO95772 234 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 MATR3P43243 847 aaKnown RBP eCLIP8.19□□□□□ -1.13e-8■■□□□ 11.7
CHD2-208ENST00000626874 CCDC88BA6NC98 1476 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 ESCO1Q5FWF5 840 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 CTNNA3Q9UI47 895 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 ARHGAP5Q13017 1502 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 ATF7IPQ6VMQ6 1270 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 LRRC45Q96CN5 670 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 DNAJC2Q99543 621 aaKnown RBP8.19□□□□□ -1.1
CHD2-208ENST00000626874 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
CHD2-208ENST00000626874 VPS37CA5D8V6 355 aaPredicted RBP8.19□□□□□ -1.1
CHD2-208ENST00000626874 PLIN1O60240 522 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 ZNF76P36508 570 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 FSD1Q9BTV5 496 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 CCDC91Q7Z6B0 441 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 ZSCAN29Q8IWY8 852 aaPredicted RBP8.19□□□□□ -1.1
CHD2-208ENST00000626874 IPO9Q96P70 1041 aaKnown RBP8.19□□□□□ -1.1
CHD2-208ENST00000626874 FERMT1Q9BQL6 677 aa8.19□□□□□ -1.1
CHD2-208ENST00000626874 CCDC69A6NI79 296 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 STAMBPO95630 424 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 IGHMBP2P38935 993 aaKnown RBP8.18□□□□□ -1.1
CHD2-208ENST00000626874 AMER1Q5JTC6 1135 aaPredicted RBP8.18□□□□□ -1.1
CHD2-208ENST00000626874 EPB41L2O43491 1005 aaKnown RBP8.18□□□□□ -1.1
CHD2-208ENST00000626874 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
CHD2-208ENST00000626874 ZPR1O75312 459 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 TXNDC2Q86VQ3 553 aa8.18□□□□□ -1.1
CHD2-208ENST00000626874 LRPPRCP42704 1394 aaKnown RBP8.18□□□□□ -1.1
CHD2-208ENST00000626874 SYNJ2O15056 1496 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 AIMP1Q12904 312 aaKnown RBP8.17□□□□□ -1.1
CHD2-208ENST00000626874 SLC4A3P48751 1232 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 TRAF1Q13077 416 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 MTERF4Q7Z6M4 381 aaKnown RBP8.17□□□□□ -1.1
CHD2-208ENST00000626874 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 CEP131Q9UPN4 1083 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 GAPVD1Q14C86 1478 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 GIGYF2Q6Y7W6 1299 aaKnown RBP8.17□□□□□ -1.1
CHD2-208ENST00000626874 FAM13BQ9NYF5 915 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 USP47Q96K76 1375 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 MYO15BQ96JP2 1530 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 ANAPC15P60006 121 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 RAB34Q9BZG1 259 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 SRCIN1Q9C0H9 1055 aa8.17□□□□□ -1.1
CHD2-208ENST00000626874 ELL2O00472 640 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 KIF4AO95239 1232 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 FGFR1OPO95684 399 aaKnown RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 C16orf71Q8IYS4 520 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 SLC52A1Q9NWF4 448 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 KIF20AO95235 890 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 SCLT1Q96NL6 688 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 MBD3O95983 291 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 CAVIN1Q6NZI2 390 aaKnown RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 PPM1EQ8WY54 764 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 HSP90AB3PQ58FF7 597 aa8.16□□□□□ -1.1
CHD2-208ENST00000626874 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
CHD2-208ENST00000626874 KCNH5Q8NCM2 988 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms