RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 QTRT2Q9H974 415 aaKnown RBP23.56■■□□□ 1.36
UBE3D-208ENST00000626828 TOPAZ1Q8N9V7 1692 aa23.56■■□□□ 1.36
UBE3D-208ENST00000626828 SOCS7O14512 581 aa23.55■■□□□ 1.36
UBE3D-208ENST00000626828 TESK2Q96S53 571 aa23.55■■□□□ 1.36
UBE3D-208ENST00000626828 TRPM3Q9HCF6 1732 aaPredicted RBP23.55■■□□□ 1.36
UBE3D-208ENST00000626828 BRD4O60885 1362 aaPredicted RBP23.54■■□□□ 1.36
UBE3D-208ENST00000626828 USP21Q9UK80 565 aa23.54■■□□□ 1.36
UBE3D-208ENST00000626828 RXRBP28702 533 aa23.53■■□□□ 1.36
UBE3D-208ENST00000626828 ABTB2Q8N961 1025 aa23.53■■□□□ 1.36
UBE3D-208ENST00000626828 USP47Q96K76 1375 aa23.52■■□□□ 1.36
UBE3D-208ENST00000626828 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
UBE3D-208ENST00000626828 TRPC5Q9UL62 973 aaPredicted RBP23.5■■□□□ 1.35
UBE3D-208ENST00000626828 NLRP13Q86W25 1043 aa23.49■■□□□ 1.35
UBE3D-208ENST00000626828 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
UBE3D-208ENST00000626828 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
UBE3D-208ENST00000626828 RBM6P78332 1123 aaKnown RBP23.48■■□□□ 1.35
UBE3D-208ENST00000626828 TMF1P82094 1093 aa23.48■■□□□ 1.35
UBE3D-208ENST00000626828 NUTM2GQ5VZR2 741 aa23.48■■□□□ 1.35
UBE3D-208ENST00000626828 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
UBE3D-208ENST00000626828 USP6P35125 1406 aa23.46■■□□□ 1.35
UBE3D-208ENST00000626828 SLC12A5Q9H2X9 1139 aa23.46■■□□□ 1.35
UBE3D-208ENST00000626828 UNC5CLQ8IV45 518 aa23.45■■□□□ 1.34
UBE3D-208ENST00000626828 NLRP6P59044 892 aa23.44■■□□□ 1.34
UBE3D-208ENST00000626828 CDCA8Q53HL2 280 aa23.44■■□□□ 1.34
UBE3D-208ENST00000626828 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
UBE3D-208ENST00000626828 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
UBE3D-208ENST00000626828 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
UBE3D-208ENST00000626828 CPSF1Q10570 1443 aaKnown RBP23.43■■□□□ 1.34
UBE3D-208ENST00000626828 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
UBE3D-208ENST00000626828 TTC21BQ7Z4L5 1316 aa23.42■■□□□ 1.34
UBE3D-208ENST00000626828 SSH2Q76I76 1423 aa23.42■■□□□ 1.34
UBE3D-208ENST00000626828 TTC21AQ8NDW8 1320 aa23.41■■□□□ 1.34
UBE3D-208ENST00000626828 SLIT2O94813 1529 aa23.41■■□□□ 1.34
UBE3D-208ENST00000626828 ZC3H6P61129 1189 aaKnown RBP23.4■■□□□ 1.34
UBE3D-208ENST00000626828 EIF4G2P78344 907 aaKnown RBP eCLIP23.4■■□□□ 1.34
UBE3D-208ENST00000626828 PRDM11Q9NQV5 511 aa23.4■■□□□ 1.34
UBE3D-208ENST00000626828 GCP02774 474 aa23.39■■□□□ 1.33
UBE3D-208ENST00000626828 GJD4Q96KN9 370 aaPredicted RBP23.39■■□□□ 1.33
UBE3D-208ENST00000626828 ATRNO75882 1429 aa23.39■■□□□ 1.33
UBE3D-208ENST00000626828 USP19O94966 1318 aa23.38■■□□□ 1.33
UBE3D-208ENST00000626828 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
UBE3D-208ENST00000626828 ABCA3Q99758 1704 aa23.38■■□□□ 1.33
UBE3D-208ENST00000626828 NINLQ9Y2I6 1382 aa23.38■■□□□ 1.33
UBE3D-208ENST00000626828 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
UBE3D-208ENST00000626828 VPS72Q15906 364 aa23.36■■□□□ 1.33
UBE3D-208ENST00000626828 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
UBE3D-208ENST00000626828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.35■■□□□ 1.33
UBE3D-208ENST00000626828 KIAA0232Q92628 1395 aa23.35■■□□□ 1.33
UBE3D-208ENST00000626828 HSPA5P11021 654 aaKnown RBP23.34■■□□□ 1.33
UBE3D-208ENST00000626828 CRYBG1Q9Y4K1 1723 aa23.33■■□□□ 1.33
UBE3D-208ENST00000626828 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
UBE3D-208ENST00000626828 CHRNA2Q15822 529 aa23.33■■□□□ 1.33
UBE3D-208ENST00000626828 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
UBE3D-208ENST00000626828 CCDC9Q9Y3X0 531 aaKnown RBP23.32■■□□□ 1.32
UBE3D-208ENST00000626828 NWD2Q9ULI1 1742 aa23.32■■□□□ 1.32
UBE3D-208ENST00000626828 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
UBE3D-208ENST00000626828 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.31■■□□□ 1.32
UBE3D-208ENST00000626828 CPDO75976 1380 aa23.31■■□□□ 1.32
UBE3D-208ENST00000626828 A0A1W2PP64 1363 aa23.3■■□□□ 1.32
UBE3D-208ENST00000626828 EVA1CP58658 441 aa23.29■■□□□ 1.32
UBE3D-208ENST00000626828 EDC4Q6P2E9 1401 aaKnown RBP23.29■■□□□ 1.32
UBE3D-208ENST00000626828 PHRF1Q9P1Y6 1649 aaKnown RBP23.29■■□□□ 1.32
UBE3D-208ENST00000626828 MON2Q7Z3U7 1717 aa23.28■■□□□ 1.32
UBE3D-208ENST00000626828 NME9Q86XW9 330 aa23.28■■□□□ 1.32
UBE3D-208ENST00000626828 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
UBE3D-208ENST00000626828 USP31Q70CQ4 1352 aa23.27■■□□□ 1.32
UBE3D-208ENST00000626828 ANKRD36BQ8N2N9 1353 aa23.27■■□□□ 1.31
UBE3D-208ENST00000626828 PIK3C2AO00443 1686 aa23.26■■□□□ 1.31
UBE3D-208ENST00000626828 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
UBE3D-208ENST00000626828 ZRANB1Q9UGI0 708 aa23.26■■□□□ 1.31
UBE3D-208ENST00000626828 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
UBE3D-208ENST00000626828 RGS12O14924 1447 aa23.25■■□□□ 1.31
UBE3D-208ENST00000626828 ZBTB7CA1YPR0 619 aa23.24■■□□□ 1.31
UBE3D-208ENST00000626828 ARHGEF25Q86VW2 580 aa23.24■■□□□ 1.31
UBE3D-208ENST00000626828 SLIT3O75094 1523 aa23.23■■□□□ 1.31
UBE3D-208ENST00000626828 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
UBE3D-208ENST00000626828 SOX12O15370 315 aa23.23■■□□□ 1.31
UBE3D-208ENST00000626828 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
UBE3D-208ENST00000626828 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
UBE3D-208ENST00000626828 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
UBE3D-208ENST00000626828 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
UBE3D-208ENST00000626828 SEPT12Q8IYM1 358 aa23.21■■□□□ 1.31
UBE3D-208ENST00000626828 COG3Q96JB2 828 aa23.2■■□□□ 1.3
UBE3D-208ENST00000626828 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
UBE3D-208ENST00000626828 GLI3P10071 1580 aa23.19■■□□□ 1.3
UBE3D-208ENST00000626828 NRAPQ86VF7 1730 aa23.19■■□□□ 1.3
UBE3D-208ENST00000626828 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
UBE3D-208ENST00000626828 FYB1O15117 783 aa23.18■■□□□ 1.3
UBE3D-208ENST00000626828 FAM98CQ17RN3 349 aaKnown RBP23.18■■□□□ 1.3
UBE3D-208ENST00000626828 LARP1Q6PKG0 1096 aaKnown RBP23.17■■□□□ 1.3
UBE3D-208ENST00000626828 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.3
UBE3D-208ENST00000626828 CARD14Q9BXL6 1004 aa23.17■■□□□ 1.3
UBE3D-208ENST00000626828 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
UBE3D-208ENST00000626828 A0A0G2JS52 829 aa23.15■■□□□ 1.3
UBE3D-208ENST00000626828 MYT1Q01538 1121 aa23.15■■□□□ 1.3
UBE3D-208ENST00000626828 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
UBE3D-208ENST00000626828 USP35Q9P2H5 1018 aa23.14■■□□□ 1.29
UBE3D-208ENST00000626828 LMO7Q8WWI1 1683 aa23.13■■□□□ 1.29
UBE3D-208ENST00000626828 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
UBE3D-208ENST00000626828 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms