RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
CHD2-206ENST00000625990 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
CHD2-206ENST00000625990 ATRNO75882 1429 aa12.95□□□□□ -0.34
CHD2-206ENST00000625990 TNS3Q68CZ2 1445 aa12.95□□□□□ -0.34
CHD2-206ENST00000625990 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CHD2-206ENST00000625990 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
CHD2-206ENST00000625990 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
CHD2-206ENST00000625990 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
CHD2-206ENST00000625990 HRCP23327 699 aa12.93□□□□□ -0.34
CHD2-206ENST00000625990 PSME1Q06323 249 aa12.93□□□□□ -0.34
CHD2-206ENST00000625990 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
CHD2-206ENST00000625990 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
CHD2-206ENST00000625990 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
CHD2-206ENST00000625990 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
CHD2-206ENST00000625990 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
CHD2-206ENST00000625990 EP400Q96L91 3159 aa12.91□□□□□ -0.34
CHD2-206ENST00000625990 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
CHD2-206ENST00000625990 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
CHD2-206ENST00000625990 TULP4Q9NRJ4 1543 aa12.91□□□□□ -0.34
CHD2-206ENST00000625990 ATP7BP35670 1465 aa12.91□□□□□ -0.34
CHD2-206ENST00000625990 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
CHD2-206ENST00000625990 GLI3P10071 1580 aa12.9□□□□□ -0.34
CHD2-206ENST00000625990 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
CHD2-206ENST00000625990 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
CHD2-206ENST00000625990 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
CHD2-206ENST00000625990 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
CHD2-206ENST00000625990 SLIT2O94813 1529 aa12.89□□□□□ -0.35
CHD2-206ENST00000625990 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
CHD2-206ENST00000625990 CDK19Q9BWU1 502 aa12.89□□□□□ -0.35
CHD2-206ENST00000625990 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
CHD2-206ENST00000625990 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
CHD2-206ENST00000625990 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CHD2-206ENST00000625990 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
CHD2-206ENST00000625990 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
CHD2-206ENST00000625990 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
CHD2-206ENST00000625990 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
CHD2-206ENST00000625990 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
CHD2-206ENST00000625990 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
CHD2-206ENST00000625990 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
CHD2-206ENST00000625990 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
CHD2-206ENST00000625990 CCDC9Q9Y3X0 531 aaKnown RBP12.85□□□□□ -0.35
CHD2-206ENST00000625990 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
CHD2-206ENST00000625990 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
CHD2-206ENST00000625990 FAM182BQ5T319 152 aa12.84□□□□□ -0.35
CHD2-206ENST00000625990 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
CHD2-206ENST00000625990 CRYBG1Q9Y4K1 1723 aa12.84□□□□□ -0.35
CHD2-206ENST00000625990 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 GPRASP1Q5JY77 1395 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 NRAPQ86VF7 1730 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 ACEP12821 1306 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.36
CHD2-206ENST00000625990 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
CHD2-206ENST00000625990 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
CHD2-206ENST00000625990 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
CHD2-206ENST00000625990 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
CHD2-206ENST00000625990 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
CHD2-206ENST00000625990 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
CHD2-206ENST00000625990 ZC3H6P61129 1189 aaKnown RBP12.81□□□□□ -0.36
CHD2-206ENST00000625990 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
CHD2-206ENST00000625990 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
CHD2-206ENST00000625990 KIAA0232Q92628 1395 aa12.81□□□□□ -0.36
CHD2-206ENST00000625990 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
CHD2-206ENST00000625990 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
CHD2-206ENST00000625990 A0A0G2JS52 829 aa12.8□□□□□ -0.36
CHD2-206ENST00000625990 MYT1Q01538 1121 aa12.8□□□□□ -0.36
CHD2-206ENST00000625990 VPS72Q15906 364 aa12.8□□□□□ -0.36
CHD2-206ENST00000625990 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
CHD2-206ENST00000625990 EIF3AQ14152 1382 aaKnown RBP12.8□□□□□ -0.36
CHD2-206ENST00000625990 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CHD2-206ENST00000625990 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
CHD2-206ENST00000625990 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
CHD2-206ENST00000625990 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 MIER1Q8N108 512 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 PRDM11Q9NQV5 511 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
CHD2-206ENST00000625990 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
CHD2-206ENST00000625990 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
CHD2-206ENST00000625990 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
CHD2-206ENST00000625990 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
CHD2-206ENST00000625990 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.37
CHD2-206ENST00000625990 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
CHD2-206ENST00000625990 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
CHD2-206ENST00000625990 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
CHD2-206ENST00000625990 SOX12O15370 315 aa12.74□□□□□ -0.37
CHD2-206ENST00000625990 SPATA31A5Q5VU36 1347 aa12.73□□□□□ -0.37
CHD2-206ENST00000625990 SPATA31A7Q8IWB4 1347 aa12.73□□□□□ -0.37
CHD2-206ENST00000625990 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
CHD2-206ENST00000625990 ZRANB1Q9UGI0 708 aa12.73□□□□□ -0.37
CHD2-206ENST00000625990 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
CHD2-206ENST00000625990 LARP1Q6PKG0 1096 aaKnown RBP12.72□□□□□ -0.37
CHD2-206ENST00000625990 USP6P35125 1406 aa12.71□□□□□ -0.37
CHD2-206ENST00000625990 PIK3C2AO00443 1686 aa12.71□□□□□ -0.37
CHD2-206ENST00000625990 ONECUT3O60422 494 aaPredicted RBP12.71□□□□□ -0.37
CHD2-206ENST00000625990 THSD7AQ9UPZ6 1657 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms