RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 CABP2Q9NPB3 220 aa38.25■■■■□ 3.71
DUX4L28-201ENST00000623687 ACEP12821 1306 aa38.24■■■■□ 3.71
DUX4L28-201ENST00000623687 PLEKHG3A1L390 1219 aa38.23■■■■□ 3.71
DUX4L28-201ENST00000623687 PAK3O75914 559 aaPredicted RBP38.22■■■■□ 3.71
DUX4L28-201ENST00000623687 RALGAPBQ86X10 1494 aa38.22■■■■□ 3.71
DUX4L28-201ENST00000623687 PPIP5K1Q6PFW1 1433 aa38.21■■■■□ 3.71
DUX4L28-201ENST00000623687 NWD2Q9ULI1 1742 aa38.21■■■■□ 3.71
DUX4L28-201ENST00000623687 UNC5CLQ8IV45 518 aa38.17■■■■□ 3.7
DUX4L28-201ENST00000623687 PHRF1Q9P1Y6 1649 aaKnown RBP38.16■■■■□ 3.7
DUX4L28-201ENST00000623687 GLI3P10071 1580 aa38.14■■■■□ 3.7
DUX4L28-201ENST00000623687 EVC2Q86UK5 1308 aa38.13■■■■□ 3.7
DUX4L28-201ENST00000623687 CARD11Q9BXL7 1154 aa38.12■■■■□ 3.69
DUX4L28-201ENST00000623687 NRAPQ86VF7 1730 aa38.12■■■■□ 3.69
DUX4L28-201ENST00000623687 COL14A1Q05707 1796 aaKnown RBP38.11■■■■□ 3.69
DUX4L28-201ENST00000623687 FAM83GA6ND36 823 aa38.11■■■■□ 3.69
DUX4L28-201ENST00000623687 GJD4Q96KN9 370 aaPredicted RBP38.11■■■■□ 3.69
DUX4L28-201ENST00000623687 UPF1Q92900 1129 aaKnown RBP eCLIP38.1■■■■□ 3.69
DUX4L28-201ENST00000623687 CABP1Q9NZU7 370 aa38.08■■■■□ 3.69
DUX4L28-201ENST00000623687 NUTM2GQ5VZR2 741 aa38.06■■■■□ 3.68
DUX4L28-201ENST00000623687 SBNO2Q9Y2G9 1366 aa38.06■■■■□ 3.68
DUX4L28-201ENST00000623687 VPS72Q15906 364 aa38.02■■■■□ 3.68
DUX4L28-201ENST00000623687 USP6P35125 1406 aa38.02■■■■□ 3.68
DUX4L28-201ENST00000623687 NRKQ7Z2Y5 1582 aa38.02■■■■□ 3.68
DUX4L28-201ENST00000623687 AKAP12Q02952 1782 aa38.01■■■■□ 3.67
DUX4L28-201ENST00000623687 ABTB2Q8N961 1025 aa38■■■■□ 3.67
DUX4L28-201ENST00000623687 BTG4Q9NY30 223 aa37.99■■■■□ 3.67
DUX4L28-201ENST00000623687 BRD4O60885 1362 aaPredicted RBP37.98■■■■□ 3.67
DUX4L28-201ENST00000623687 PCGF6Q9BYE7 350 aa37.98■■■■□ 3.67
DUX4L28-201ENST00000623687 KIAA0232Q92628 1395 aa37.97■■■■□ 3.67
DUX4L28-201ENST00000623687 PRDM11Q9NQV5 511 aa37.96■■■■□ 3.67
DUX4L28-201ENST00000623687 SSH2Q76I76 1423 aa37.95■■■■□ 3.67
DUX4L28-201ENST00000623687 USP19O94966 1318 aa37.95■■■■□ 3.67
DUX4L28-201ENST00000623687 BRWD3Q6RI45 1802 aa37.95■■■■□ 3.67
DUX4L28-201ENST00000623687 ATAD2Q6PL18 1390 aa37.94■■■■□ 3.66
DUX4L28-201ENST00000623687 PIK3C2AO00443 1686 aa37.93■■■■□ 3.66
DUX4L28-201ENST00000623687 CCDC9Q9Y3X0 531 aaKnown RBP37.93■■■■□ 3.66
DUX4L28-201ENST00000623687 ZC3H6P61129 1189 aaKnown RBP37.9■■■■□ 3.66
DUX4L28-201ENST00000623687 CHRNA2Q15822 529 aa37.89■■■■□ 3.66
DUX4L28-201ENST00000623687 NLRP13Q86W25 1043 aa37.89■■■■□ 3.66
DUX4L28-201ENST00000623687 CPSF1Q10570 1443 aaKnown RBP37.88■■■■□ 3.66
DUX4L28-201ENST00000623687 MON2Q7Z3U7 1717 aa37.88■■■■□ 3.65
DUX4L28-201ENST00000623687 CLSPNQ9HAW4 1339 aa37.86■■■■□ 3.65
DUX4L28-201ENST00000623687 SLIT3O75094 1523 aa37.85■■■■□ 3.65
DUX4L28-201ENST00000623687 LMO7Q8WWI1 1683 aa37.85■■■■□ 3.65
DUX4L28-201ENST00000623687 SEPT12Q8IYM1 358 aa37.84■■■■□ 3.65
DUX4L28-201ENST00000623687 ZNF692Q9BU19 519 aaPredicted RBP37.84■■■■□ 3.65
DUX4L28-201ENST00000623687 CPDO75976 1380 aa37.83■■■■□ 3.65
DUX4L28-201ENST00000623687 ONECUT3O60422 494 aaPredicted RBP37.83■■■■□ 3.65
DUX4L28-201ENST00000623687 EP400Q96L91 3159 aa37.82■■■■□ 3.65
DUX4L28-201ENST00000623687 ST20-MTHFSA0A0A6YYL1 179 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 GCP02774 474 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 NLRP6P59044 892 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 TESK2Q96S53 571 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 CD163L1Q9NR16 1453 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 TTC21BQ7Z4L5 1316 aa37.81■■■■□ 3.64
DUX4L28-201ENST00000623687 SPATA31A5Q5VU36 1347 aa37.8■■■■□ 3.64
DUX4L28-201ENST00000623687 SPATA31A7Q8IWB4 1347 aa37.8■■■■□ 3.64
DUX4L28-201ENST00000623687 CAMTA1Q9Y6Y1 1673 aa37.79■■■■□ 3.64
DUX4L28-201ENST00000623687 KTN1Q86UP2 1357 aaKnown RBP37.79■■■■□ 3.64
DUX4L28-201ENST00000623687 FAM98CQ17RN3 349 aaKnown RBP37.77■■■■□ 3.64
DUX4L28-201ENST00000623687 STRN4Q9NRL3 753 aa37.75■■■■□ 3.63
DUX4L28-201ENST00000623687 TIMELESSQ9UNS1 1208 aa37.75■■■■□ 3.63
DUX4L28-201ENST00000623687 THSD7AQ9UPZ6 1657 aa37.75■■■■□ 3.63
DUX4L28-201ENST00000623687 TTC21AQ8NDW8 1320 aa37.74■■■■□ 3.63
DUX4L28-201ENST00000623687 USP47Q96K76 1375 aa37.73■■■■□ 3.63
DUX4L28-201ENST00000623687 TMC1Q8TDI8 760 aa37.72■■■■□ 3.63
DUX4L28-201ENST00000623687 SPATA31A1Q5TZJ5 1347 aa37.71■■■■□ 3.63
DUX4L28-201ENST00000623687 PUS7Q96PZ0 661 aaKnown RBP37.71■■■■□ 3.63
DUX4L28-201ENST00000623687 SLC12A5Q9H2X9 1139 aa37.71■■■■□ 3.63
DUX4L28-201ENST00000623687 A0A0G2JS52 829 aa37.7■■■■□ 3.63
DUX4L28-201ENST00000623687 MYT1Q01538 1121 aa37.7■■■■□ 3.63
DUX4L28-201ENST00000623687 COL18A1P39060 1754 aa37.69■■■■□ 3.62
DUX4L28-201ENST00000623687 KRT27Q7Z3Y8 459 aa37.68■■■■□ 3.62
DUX4L28-201ENST00000623687 USP54Q70EL1 1684 aa37.68■■■■□ 3.62
DUX4L28-201ENST00000623687 COL5A2P05997 1499 aaPredicted RBP37.66■■■■□ 3.62
DUX4L28-201ENST00000623687 ZBTB7CA1YPR0 619 aa37.65■■■■□ 3.62
DUX4L28-201ENST00000623687 EVA1CP58658 441 aa37.65■■■■□ 3.62
DUX4L28-201ENST00000623687 A0A1W2PP64 1363 aa37.65■■■■□ 3.62
DUX4L28-201ENST00000623687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.64■■■■□ 3.62
DUX4L28-201ENST00000623687 NFAT5O94916 1531 aa37.63■■■■□ 3.61
DUX4L28-201ENST00000623687 LARP1Q6PKG0 1096 aaKnown RBP37.63■■■■□ 3.61
DUX4L28-201ENST00000623687 HDGFL2Q7Z4V5 671 aaPredicted RBP37.63■■■■□ 3.61
DUX4L28-201ENST00000623687 AATKQ6ZMQ8 1374 aa37.63■■■■□ 3.61
DUX4L28-201ENST00000623687 ZRANB1Q9UGI0 708 aa37.62■■■■□ 3.61
DUX4L28-201ENST00000623687 SLC24A1O60721 1099 aa37.61■■■■□ 3.61
DUX4L28-201ENST00000623687 CCER1Q8TC90 406 aaPredicted RBP37.61■■■■□ 3.61
DUX4L28-201ENST00000623687 EDC4Q6P2E9 1401 aaKnown RBP37.61■■■■□ 3.61
DUX4L28-201ENST00000623687 USP31Q70CQ4 1352 aa37.6■■■■□ 3.61
DUX4L28-201ENST00000623687 CCDC125Q86Z20 511 aa37.6■■■■□ 3.61
DUX4L28-201ENST00000623687 TERF2IPQ9NYB0 399 aa37.6■■■■□ 3.61
DUX4L28-201ENST00000623687 RGPD5Q99666 1765 aa37.6■■■■□ 3.61
DUX4L28-201ENST00000623687 NME9Q86XW9 330 aa37.59■■■■□ 3.61
DUX4L28-201ENST00000623687 KCNH5Q8NCM2 988 aa37.59■■■■□ 3.61
DUX4L28-201ENST00000623687 USP35Q9P2H5 1018 aa37.59■■■■□ 3.61
DUX4L28-201ENST00000623687 BLMP54132 1417 aaPredicted RBP37.59■■■■□ 3.61
DUX4L28-201ENST00000623687 NINLQ9Y2I6 1382 aa37.58■■■■□ 3.61
DUX4L28-201ENST00000623687 SOX12O15370 315 aa37.58■■■■□ 3.61
DUX4L28-201ENST00000623687 ARHGEF25Q86VW2 580 aa37.57■■■■□ 3.6
DUX4L28-201ENST00000623687 TMF1P82094 1093 aa37.54■■■■□ 3.6
DUX4L28-201ENST00000623687 BARGINQ6ZT62 677 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms