RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 SPATA31A7Q8IWB4 1347 aa8.25□□□□□ -1.09
EBF1-211ENST00000622875 PLSCR1O15162 318 aa8.24□□□□□ -1.09
EBF1-211ENST00000622875 MLLT1Q03111 559 aaPredicted RBP8.24□□□□□ -1.09
EBF1-211ENST00000622875 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
EBF1-211ENST00000622875 TOMM70O94826 608 aa8.23□□□□□ -1.09
EBF1-211ENST00000622875 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
EBF1-211ENST00000622875 PRDM10Q9NQV6 1147 aa8.23□□□□□ -1.09
EBF1-211ENST00000622875 SPATA31A3Q5VYP0 1347 aa8.23□□□□□ -1.09
EBF1-211ENST00000622875 FAM98CQ17RN3 349 aaKnown RBP8.23□□□□□ -1.09
EBF1-211ENST00000622875 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
EBF1-211ENST00000622875 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
EBF1-211ENST00000622875 ZNF644Q9H582 1327 aaPredicted RBP8.22□□□□□ -1.09
EBF1-211ENST00000622875 CCDC144AA2RUR9 1427 aa8.22□□□□□ -1.09
EBF1-211ENST00000622875 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
EBF1-211ENST00000622875 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
EBF1-211ENST00000622875 USP19O94966 1318 aa8.22□□□□□ -1.09
EBF1-211ENST00000622875 UTRNP46939 3433 aa8.22□□□□□ -1.09
EBF1-211ENST00000622875 ZBTB7AO95365 584 aa8.21□□□□□ -1.09
EBF1-211ENST00000622875 CSRNP3Q8WYN3 585 aa8.21□□□□□ -1.09
EBF1-211ENST00000622875 BCANQ96GW7 911 aa8.21□□□□□ -1.09
EBF1-211ENST00000622875 ORAI2Q96SN7 254 aa8.21□□□□□ -1.09
EBF1-211ENST00000622875 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.1
EBF1-211ENST00000622875 FMN2Q9NZ56 1722 aa8.21□□□□□ -1.1
EBF1-211ENST00000622875 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
EBF1-211ENST00000622875 HOMEZQ8IX15 550 aa8.2□□□□□ -1.1
EBF1-211ENST00000622875 FSTL1Q12841 308 aa8.2□□□□□ -1.1
EBF1-211ENST00000622875 BCL9O00512 1426 aa8.2□□□□□ -1.1
EBF1-211ENST00000622875 ALS2Q96Q42 1657 aa8.19□□□□□ -1.1
EBF1-211ENST00000622875 PDGFDQ9GZP0 370 aaPredicted RBP8.19□□□□□ -1.1
EBF1-211ENST00000622875 WNK3Q9BYP7 1800 aa8.19□□□□□ -1.1
EBF1-211ENST00000622875 TRPM3Q9HCF6 1732 aaPredicted RBP8.19□□□□□ -1.1
EBF1-211ENST00000622875 ATP7BP35670 1465 aa8.18□□□□□ -1.1
EBF1-211ENST00000622875 TNRC6CQ9HCJ0 1690 aaKnown RBP8.18□□□□□ -1.1
EBF1-211ENST00000622875 HFM1A2PYH4 1435 aa8.18□□□□□ -1.1
EBF1-211ENST00000622875 ATF5Q9Y2D1 282 aaPredicted RBP8.18□□□□□ -1.1
EBF1-211ENST00000622875 PXDNLA1KZ92 1463 aa8.18□□□□□ -1.1
EBF1-211ENST00000622875 AMER1Q5JTC6 1135 aaPredicted RBP8.18□□□□□ -1.1
EBF1-211ENST00000622875 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
EBF1-211ENST00000622875 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
EBF1-211ENST00000622875 YBX3P16989 372 aaKnown RBP eCLIP8.17□□□□□ -1.1
EBF1-211ENST00000622875 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
EBF1-211ENST00000622875 KANK1Q14678 1352 aa8.17□□□□□ -1.1
EBF1-211ENST00000622875 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
EBF1-211ENST00000622875 VIRMAQ69YN4 1812 aaKnown RBP8.16□□□□□ -1.1
EBF1-211ENST00000622875 TUBGCP6Q96RT7 1819 aa8.16□□□□□ -1.1
EBF1-211ENST00000622875 SPATA31A1Q5TZJ5 1347 aa8.15□□□□□ -1.1
EBF1-211ENST00000622875 ARHGEF10O15013 1369 aa8.15□□□□□ -1.11
EBF1-211ENST00000622875 METP08581 1390 aa8.15□□□□□ -1.11
EBF1-211ENST00000622875 BARGINQ6ZT62 677 aa8.15□□□□□ -1.11
EBF1-211ENST00000622875 LRRC37A3O60309 1634 aa8.14□□□□□ -1.11
EBF1-211ENST00000622875 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
EBF1-211ENST00000622875 SLC15A2Q16348 729 aa8.14□□□□□ -1.11
EBF1-211ENST00000622875 PKD1L3Q7Z443 1732 aa8.14□□□□□ -1.11
EBF1-211ENST00000622875 A0A0G2JS52 829 aa8.14□□□□□ -1.11
EBF1-211ENST00000622875 PITPNM2Q9BZ72 1349 aa8.13□□□□□ -1.11
EBF1-211ENST00000622875 ABHD8Q96I13 439 aa8.13□□□□□ -1.11
EBF1-211ENST00000622875 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
EBF1-211ENST00000622875 STK32BQ9NY57 414 aa8.13□□□□□ -1.11
EBF1-211ENST00000622875 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 TSPY4P0CV99 314 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 TSPY10P0CW01 314 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 IFT172Q9UG01 1749 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 NHSQ6T4R5 1651 aa8.12□□□□□ -1.11
EBF1-211ENST00000622875 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
EBF1-211ENST00000622875 PHRF1Q9P1Y6 1649 aaKnown RBP8.11□□□□□ -1.11
EBF1-211ENST00000622875 ADAMTS7Q9UKP4 1686 aa8.11□□□□□ -1.11
EBF1-211ENST00000622875 CHGAP10645 457 aaKnown RBP8.11□□□□□ -1.11
EBF1-211ENST00000622875 PROM2Q8N271 834 aa8.11□□□□□ -1.11
EBF1-211ENST00000622875 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
EBF1-211ENST00000622875 BRD4O60885 1362 aaPredicted RBP8.1□□□□□ -1.11
EBF1-211ENST00000622875 PIK3C2AO00443 1686 aa8.1□□□□□ -1.11
EBF1-211ENST00000622875 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
EBF1-211ENST00000622875 LMO7Q8WWI1 1683 aa8.1□□□□□ -1.11
EBF1-211ENST00000622875 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
EBF1-211ENST00000622875 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
EBF1-211ENST00000622875 NRXN1Q9ULB1 1477 aa8.09□□□□□ -1.11
EBF1-211ENST00000622875 E9PCH4 1651 aa8.09□□□□□ -1.11
EBF1-211ENST00000622875 BTG4Q9NY30 223 aa8.09□□□□□ -1.12
EBF1-211ENST00000622875 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
EBF1-211ENST00000622875 TRPM1Q7Z4N2 1603 aa8.08□□□□□ -1.12
EBF1-211ENST00000622875 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
EBF1-211ENST00000622875 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
EBF1-211ENST00000622875 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
EBF1-211ENST00000622875 PRPF38BQ5VTL8 546 aaKnown RBP8.08□□□□□ -1.12
EBF1-211ENST00000622875 RGPD8O14715 1765 aaPredicted RBP8.07□□□□□ -1.12
EBF1-211ENST00000622875 THSD7BQ9C0I4 1608 aa8.07□□□□□ -1.12
EBF1-211ENST00000622875 TECPR2O15040 1411 aa8.07□□□□□ -1.12
EBF1-211ENST00000622875 HTRA3P83110 453 aa8.06□□□□□ -1.12
EBF1-211ENST00000622875 ZNF526Q8TF50 670 aaPredicted RBP8.06□□□□□ -1.12
EBF1-211ENST00000622875 CTCFP49711 727 aaPredicted RBP8.06□□□□□ -1.12
EBF1-211ENST00000622875 FOXO3O43524 673 aa8.05□□□□□ -1.12
EBF1-211ENST00000622875 ESCO1Q5FWF5 840 aa8.05□□□□□ -1.12
EBF1-211ENST00000622875 PDE3BQ13370 1112 aa8.05□□□□□ -1.12
EBF1-211ENST00000622875 FOXN1O15353 648 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 POLD1P28340 1107 aa8.04□□□□□ -1.12
EBF1-211ENST00000622875 ANP32EQ9BTT0 268 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms