RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ANKRD36BQ8N2N9 1353 aa27.38■■□□□ 1.97
PDLIM2-221ENST00000622702 LRP6O75581 1613 aa27.38■■□□□ 1.97
PDLIM2-221ENST00000622702 COL22A1Q8NFW1 1626 aaPredicted RBP27.37■■□□□ 1.97
PDLIM2-221ENST00000622702 CPSF1Q10570 1443 aaKnown RBP27.37■■□□□ 1.97
PDLIM2-221ENST00000622702 LMOD2Q6P5Q4 547 aa27.37■■□□□ 1.97
PDLIM2-221ENST00000622702 TERF2IPQ9NYB0 399 aa27.37■■□□□ 1.97
PDLIM2-221ENST00000622702 PAK3O75914 559 aaPredicted RBP27.35■■□□□ 1.97
PDLIM2-221ENST00000622702 HDGFL2Q7Z4V5 671 aaPredicted RBP27.34■■□□□ 1.97
PDLIM2-221ENST00000622702 ZNF692Q9BU19 519 aaPredicted RBP27.34■■□□□ 1.97
PDLIM2-221ENST00000622702 A0A1W2PP64 1363 aa27.34■■□□□ 1.97
PDLIM2-221ENST00000622702 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.97
PDLIM2-221ENST00000622702 MEX3CQ5U5Q3 659 aaKnown RBP27.33■■□□□ 1.97
PDLIM2-221ENST00000622702 PHF23Q9BUL5 403 aaPredicted RBP27.33■■□□□ 1.97
PDLIM2-221ENST00000622702 PANK3Q9H999 370 aa27.33■■□□□ 1.97
PDLIM2-221ENST00000622702 AKAP12Q02952 1782 aa27.32■■□□□ 1.96
PDLIM2-221ENST00000622702 ARHGEF10O15013 1369 aa27.32■■□□□ 1.96
PDLIM2-221ENST00000622702 ALS2Q96Q42 1657 aa27.31■■□□□ 1.96
PDLIM2-221ENST00000622702 KTN1Q86UP2 1357 aaKnown RBP27.29■■□□□ 1.96
PDLIM2-221ENST00000622702 PLEKHG5O94827 1062 aa27.29■■□□□ 1.96
PDLIM2-221ENST00000622702 USP6P35125 1406 aa27.29■■□□□ 1.96
PDLIM2-221ENST00000622702 MON2Q7Z3U7 1717 aa27.28■■□□□ 1.96
PDLIM2-221ENST00000622702 ADAMTS2O95450 1211 aa27.28■■□□□ 1.96
PDLIM2-221ENST00000622702 CARD14Q9BXL6 1004 aa27.28■■□□□ 1.96
PDLIM2-221ENST00000622702 BRD4O60885 1362 aaPredicted RBP27.27■■□□□ 1.96
PDLIM2-221ENST00000622702 CABLES1Q8TDN4 633 aa27.26■■□□□ 1.95
PDLIM2-221ENST00000622702 EDC4Q6P2E9 1401 aaKnown RBP27.26■■□□□ 1.95
PDLIM2-221ENST00000622702 SSH2Q76I76 1423 aa27.26■■□□□ 1.95
PDLIM2-221ENST00000622702 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
PDLIM2-221ENST00000622702 NSD3Q9BZ95 1437 aa27.23■■□□□ 1.95
PDLIM2-221ENST00000622702 HAP1P54257 671 aaPredicted RBP27.23■■□□□ 1.95
PDLIM2-221ENST00000622702 NRKQ7Z2Y5 1582 aa27.23■■□□□ 1.95
PDLIM2-221ENST00000622702 ABTB2Q8N961 1025 aa27.22■■□□□ 1.95
PDLIM2-221ENST00000622702 C8orf37Q96NL8 207 aa27.22■■□□□ 1.95
PDLIM2-221ENST00000622702 RGS17Q9UGC6 210 aaPredicted RBP27.22■■□□□ 1.95
PDLIM2-221ENST00000622702 NUTM2GQ5VZR2 741 aa27.21■■□□□ 1.95
PDLIM2-221ENST00000622702 ABCA3Q99758 1704 aa27.21■■□□□ 1.95
PDLIM2-221ENST00000622702 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.95
PDLIM2-221ENST00000622702 TTC21BQ7Z4L5 1316 aa27.2■■□□□ 1.94
PDLIM2-221ENST00000622702 MARF1Q9Y4F3 1742 aaKnown RBP27.2■■□□□ 1.94
PDLIM2-221ENST00000622702 NGLY1Q96IV0 654 aa27.19■■□□□ 1.94
PDLIM2-221ENST00000622702 TTC21AQ8NDW8 1320 aa27.18■■□□□ 1.94
PDLIM2-221ENST00000622702 CRYBG1Q9Y4K1 1723 aa27.17■■□□□ 1.94
PDLIM2-221ENST00000622702 CGNL1Q0VF96 1302 aa27.17■■□□□ 1.94
PDLIM2-221ENST00000622702 AFF2P51816 1311 aa27.16■■□□□ 1.94
PDLIM2-221ENST00000622702 AMER1Q5JTC6 1135 aaPredicted RBP27.14■■□□□ 1.94
PDLIM2-221ENST00000622702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.14■■□□□ 1.94
PDLIM2-221ENST00000622702 NPC1L1Q9UHC9 1359 aa27.14■■□□□ 1.94
PDLIM2-221ENST00000622702 NLRP13Q86W25 1043 aa27.13■■□□□ 1.93
PDLIM2-221ENST00000622702 PIK3C2AO00443 1686 aa27.13■■□□□ 1.93
PDLIM2-221ENST00000622702 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
PDLIM2-221ENST00000622702 FYB1O15117 783 aa27.12■■□□□ 1.93
PDLIM2-221ENST00000622702 NLRP6P59044 892 aa27.12■■□□□ 1.93
PDLIM2-221ENST00000622702 ZNF772Q68DY9 489 aaPredicted RBP27.12■■□□□ 1.93
PDLIM2-221ENST00000622702 NSD2O96028 1365 aa27.12■■□□□ 1.93
PDLIM2-221ENST00000622702 POTEAQ6S8J7 498 aa27.1■■□□□ 1.93
PDLIM2-221ENST00000622702 NME9Q86XW9 330 aa27.1■■□□□ 1.93
PDLIM2-221ENST00000622702 FNBP4Q8N3X1 1017 aaPredicted RBP27.09■■□□□ 1.93
PDLIM2-221ENST00000622702 KIF20BQ96Q89 1820 aa27.08■■□□□ 1.93
PDLIM2-221ENST00000622702 USP31Q70CQ4 1352 aa27.08■■□□□ 1.93
PDLIM2-221ENST00000622702 USP19O94966 1318 aa27.08■■□□□ 1.93
PDLIM2-221ENST00000622702 USP21Q9UK80 565 aa27.07■■□□□ 1.92
PDLIM2-221ENST00000622702 FAM83GA6ND36 823 aa27.06■■□□□ 1.92
PDLIM2-221ENST00000622702 ILDR2Q71H61 639 aa27.06■■□□□ 1.92
PDLIM2-221ENST00000622702 GGNBP2Q9H3C7 697 aa27.06■■□□□ 1.92
PDLIM2-221ENST00000622702 USP54Q70EL1 1684 aa27.05■■□□□ 1.92
PDLIM2-221ENST00000622702 OVOS2A0A0J9YW53 1432 aa27.05■■□□□ 1.92
PDLIM2-221ENST00000622702 OVOS2Q6IE36 1432 aa27.05■■□□□ 1.92
PDLIM2-221ENST00000622702 GCP02774 474 aa27.04■■□□□ 1.92
PDLIM2-221ENST00000622702 ZC3H6P61129 1189 aaKnown RBP27.04■■□□□ 1.92
PDLIM2-221ENST00000622702 CC2D1BQ5T0F9 858 aaKnown RBP27.03■■□□□ 1.92
PDLIM2-221ENST00000622702 DIEXFQ68CQ4 756 aaKnown RBP27.03■■□□□ 1.92
PDLIM2-221ENST00000622702 ZRANB1Q9UGI0 708 aa27.03■■□□□ 1.92
PDLIM2-221ENST00000622702 SLIT2O94813 1529 aa27.03■■□□□ 1.92
PDLIM2-221ENST00000622702 PLCH1Q4KWH8 1693 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 SLIT3O75094 1523 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 COG3Q96JB2 828 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 PRDM11Q9NQV5 511 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 KIAA0232Q92628 1395 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 ANKRD26Q9UPS8 1709 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 BCL9LQ86UU0 1499 aa27.02■■□□□ 1.92
PDLIM2-221ENST00000622702 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
PDLIM2-221ENST00000622702 COL14A1Q05707 1796 aaKnown RBP27.01■■□□□ 1.91
PDLIM2-221ENST00000622702 NWD2Q9ULI1 1742 aa26.99■■□□□ 1.91
PDLIM2-221ENST00000622702 CHRNA2Q15822 529 aa26.99■■□□□ 1.91
PDLIM2-221ENST00000622702 UNC5CLQ8IV45 518 aa26.99■■□□□ 1.91
PDLIM2-221ENST00000622702 PARD3Q8TEW0 1356 aa26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 SOX12O15370 315 aa26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 MORC1Q86VD1 984 aa26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 KCNH5Q8NCM2 988 aa26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 BTG4Q9NY30 223 aa26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 TRPC5Q9UL62 973 aaPredicted RBP26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.97■■□□□ 1.91
PDLIM2-221ENST00000622702 CPDO75976 1380 aa26.96■■□□□ 1.91
PDLIM2-221ENST00000622702 RXRBP28702 533 aa26.95■■□□□ 1.91
PDLIM2-221ENST00000622702 PRKRIP1Q9H875 184 aaPredicted RBP26.95■■□□□ 1.91
PDLIM2-221ENST00000622702 ATRNO75882 1429 aa26.95■■□□□ 1.9
PDLIM2-221ENST00000622702 ZBTB7CA1YPR0 619 aa26.94■■□□□ 1.9
PDLIM2-221ENST00000622702 CNGB1Q14028 1251 aaPredicted RBP26.94■■□□□ 1.9
PDLIM2-221ENST00000622702 RALBP1Q15311 655 aa26.94■■□□□ 1.9
PDLIM2-221ENST00000622702 ANP32CO43423 234 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms