RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 UNC5CLQ8IV45 518 aa25.68■■□□□ 1.7
SCAMP4-213ENST00000621748 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.67■■□□□ 1.7
SCAMP4-213ENST00000621748 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
SCAMP4-213ENST00000621748 FAM83GA6ND36 823 aa25.66■■□□□ 1.7
SCAMP4-213ENST00000621748 UPF1Q92900 1129 aaKnown RBP eCLIP25.66■■□□□ 1.73e-7■■■■■ 50.2
SCAMP4-213ENST00000621748 GJD4Q96KN9 370 aaPredicted RBP25.66■■□□□ 1.7
SCAMP4-213ENST00000621748 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
SCAMP4-213ENST00000621748 PPIP5K1Q6PFW1 1433 aa25.63■■□□□ 1.69
SCAMP4-213ENST00000621748 PLCH1Q4KWH8 1693 aa25.63■■□□□ 1.69
SCAMP4-213ENST00000621748 CRYBG1Q9Y4K1 1723 aa25.63■■□□□ 1.69
SCAMP4-213ENST00000621748 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
SCAMP4-213ENST00000621748 NWD2Q9ULI1 1742 aa25.6■■□□□ 1.69
SCAMP4-213ENST00000621748 CABP1Q9NZU7 370 aa25.6■■□□□ 1.69
SCAMP4-213ENST00000621748 NUTM2GQ5VZR2 741 aa25.59■■□□□ 1.69
SCAMP4-213ENST00000621748 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
SCAMP4-213ENST00000621748 RALGAPBQ86X10 1494 aa25.59■■□□□ 1.69
SCAMP4-213ENST00000621748 GLI3P10071 1580 aa25.58■■□□□ 1.69
SCAMP4-213ENST00000621748 VPS72Q15906 364 aa25.57■■□□□ 1.68
SCAMP4-213ENST00000621748 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
SCAMP4-213ENST00000621748 BTG4Q9NY30 223 aa25.55■■□□□ 1.68
SCAMP4-213ENST00000621748 COL14A1Q05707 1796 aaKnown RBP25.54■■□□□ 1.68
SCAMP4-213ENST00000621748 PHRF1Q9P1Y6 1649 aaKnown RBP25.53■■□□□ 1.68
SCAMP4-213ENST00000621748 NRAPQ86VF7 1730 aa25.52■■□□□ 1.68
SCAMP4-213ENST00000621748 PRDM11Q9NQV5 511 aa25.52■■□□□ 1.68
SCAMP4-213ENST00000621748 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
SCAMP4-213ENST00000621748 KIAA0232Q92628 1395 aa25.51■■□□□ 1.67
SCAMP4-213ENST00000621748 USP6P35125 1406 aa25.51■■□□□ 1.67
SCAMP4-213ENST00000621748 ZC3H6P61129 1189 aaKnown RBP25.5■■□□□ 1.67
SCAMP4-213ENST00000621748 ATAD2Q6PL18 1390 aa25.5■■□□□ 1.67
SCAMP4-213ENST00000621748 SBNO2Q9Y2G9 1366 aa25.5■■□□□ 1.67
SCAMP4-213ENST00000621748 BRD4O60885 1362 aaPredicted RBP25.49■■□□□ 1.67
SCAMP4-213ENST00000621748 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
SCAMP4-213ENST00000621748 EP400Q96L91 3159 aa25.48■■□□□ 1.67
SCAMP4-213ENST00000621748 USP19O94966 1318 aa25.47■■□□□ 1.67
SCAMP4-213ENST00000621748 ONECUT3O60422 494 aaPredicted RBP25.47■■□□□ 1.67
SCAMP4-213ENST00000621748 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
SCAMP4-213ENST00000621748 BRWD3Q6RI45 1802 aa25.47■■□□□ 1.67
SCAMP4-213ENST00000621748 SSH2Q76I76 1423 aa25.46■■□□□ 1.67
SCAMP4-213ENST00000621748 SEPT12Q8IYM1 358 aa25.46■■□□□ 1.67
SCAMP4-213ENST00000621748 NRKQ7Z2Y5 1582 aa25.45■■□□□ 1.66
SCAMP4-213ENST00000621748 ZNF692Q9BU19 519 aaPredicted RBP25.44■■□□□ 1.66
SCAMP4-213ENST00000621748 GCP02774 474 aa25.43■■□□□ 1.66
SCAMP4-213ENST00000621748 NLRP6P59044 892 aa25.43■■□□□ 1.66
SCAMP4-213ENST00000621748 AKAP12Q02952 1782 aa25.43■■□□□ 1.66
SCAMP4-213ENST00000621748 SPATA31A5Q5VU36 1347 aa25.41■■□□□ 1.66
SCAMP4-213ENST00000621748 SPATA31A7Q8IWB4 1347 aa25.41■■□□□ 1.66
SCAMP4-213ENST00000621748 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
SCAMP4-213ENST00000621748 FAM98CQ17RN3 349 aaKnown RBP25.41■■□□□ 1.66
SCAMP4-213ENST00000621748 CPDO75976 1380 aa25.41■■□□□ 1.66
SCAMP4-213ENST00000621748 TTC21BQ7Z4L5 1316 aa25.39■■□□□ 1.66
SCAMP4-213ENST00000621748 PIK3C2AO00443 1686 aa25.39■■□□□ 1.66
SCAMP4-213ENST00000621748 ST20-MTHFSA0A0A6YYL1 179 aa25.39■■□□□ 1.66
SCAMP4-213ENST00000621748 STRN4Q9NRL3 753 aa25.39■■□□□ 1.66
SCAMP4-213ENST00000621748 TESK2Q96S53 571 aa25.38■■□□□ 1.65
SCAMP4-213ENST00000621748 CAMTA1Q9Y6Y1 1673 aa25.37■■□□□ 1.65
SCAMP4-213ENST00000621748 KTN1Q86UP2 1357 aaKnown RBP25.37■■□□□ 1.65
SCAMP4-213ENST00000621748 A0A0G2JS52 829 aa25.36■■□□□ 1.65
SCAMP4-213ENST00000621748 MYT1Q01538 1121 aa25.36■■□□□ 1.65
SCAMP4-213ENST00000621748 CLSPNQ9HAW4 1339 aa25.36■■□□□ 1.65
SCAMP4-213ENST00000621748 LMO7Q8WWI1 1683 aa25.36■■□□□ 1.65
SCAMP4-213ENST00000621748 KRT27Q7Z3Y8 459 aa25.35■■□□□ 1.65
SCAMP4-213ENST00000621748 TMC1Q8TDI8 760 aa25.35■■□□□ 1.65
SCAMP4-213ENST00000621748 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
SCAMP4-213ENST00000621748 SLIT3O75094 1523 aa25.35■■□□□ 1.65
SCAMP4-213ENST00000621748 SPATA31A1Q5TZJ5 1347 aa25.35■■□□□ 1.65
SCAMP4-213ENST00000621748 CD163L1Q9NR16 1453 aa25.34■■□□□ 1.65
SCAMP4-213ENST00000621748 EVA1CP58658 441 aa25.34■■□□□ 1.65
SCAMP4-213ENST00000621748 MON2Q7Z3U7 1717 aa25.34■■□□□ 1.65
SCAMP4-213ENST00000621748 TTC21AQ8NDW8 1320 aa25.34■■□□□ 1.65
SCAMP4-213ENST00000621748 PUS7Q96PZ0 661 aaKnown RBP25.33■■□□□ 1.65
SCAMP4-213ENST00000621748 CCDC125Q86Z20 511 aa25.32■■□□□ 1.64
SCAMP4-213ENST00000621748 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
SCAMP4-213ENST00000621748 ZBTB7CA1YPR0 619 aa25.31■■□□□ 1.64
SCAMP4-213ENST00000621748 LARP1Q6PKG0 1096 aaKnown RBP25.31■■□□□ 1.64
SCAMP4-213ENST00000621748 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
SCAMP4-213ENST00000621748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.64
SCAMP4-213ENST00000621748 USP35Q9P2H5 1018 aa25.29■■□□□ 1.64
SCAMP4-213ENST00000621748 ZRANB1Q9UGI0 708 aa25.29■■□□□ 1.64
SCAMP4-213ENST00000621748 USP47Q96K76 1375 aa25.29■■□□□ 1.64
SCAMP4-213ENST00000621748 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
SCAMP4-213ENST00000621748 HDGFL2Q7Z4V5 671 aaPredicted RBP25.27■■□□□ 1.64
SCAMP4-213ENST00000621748 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
SCAMP4-213ENST00000621748 COL5A2P05997 1499 aaPredicted RBP25.27■■□□□ 1.64
SCAMP4-213ENST00000621748 COL18A1P39060 1754 aa25.26■■□□□ 1.63
SCAMP4-213ENST00000621748 SOX12O15370 315 aa25.26■■□□□ 1.63
SCAMP4-213ENST00000621748 SLC24A1O60721 1099 aa25.26■■□□□ 1.63
SCAMP4-213ENST00000621748 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
SCAMP4-213ENST00000621748 FAM182BQ5T319 152 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 NME9Q86XW9 330 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 TERF2IPQ9NYB0 399 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 AXIN2Q9Y2T1 843 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 A0A1W2PP64 1363 aa25.25■■□□□ 1.63
SCAMP4-213ENST00000621748 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
SCAMP4-213ENST00000621748 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
SCAMP4-213ENST00000621748 TCP11L2Q8N4U5 519 aa25.22■■□□□ 1.63
SCAMP4-213ENST00000621748 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
SCAMP4-213ENST00000621748 NFAT5O94916 1531 aa25.22■■□□□ 1.63
SCAMP4-213ENST00000621748 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
SCAMP4-213ENST00000621748 DEFB132Q7Z7B7 95 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms