RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 NWD2Q9ULI1 1742 aa34.54■■■■□ 3.12
ATXN3-253ENST00000621269 SRPK2P78362 688 aaKnown RBP34.51■■■■□ 3.12
ATXN3-253ENST00000621269 ACEP12821 1306 aa34.51■■■■□ 3.11
ATXN3-253ENST00000621269 PLEKHG3A1L390 1219 aa34.49■■■■□ 3.11
ATXN3-253ENST00000621269 NBPF8Q3BBV2 869 aa34.49■■■■□ 3.11
ATXN3-253ENST00000621269 BTG4Q9NY30 223 aa34.49■■■■□ 3.11
ATXN3-253ENST00000621269 POLR3AO14802 1390 aaPredicted RBP34.49■■■■□ 3.11
ATXN3-253ENST00000621269 SEPT12Q8IYM1 358 aa34.47■■■■□ 3.11
ATXN3-253ENST00000621269 TOPAZ1Q8N9V7 1692 aa34.47■■■■□ 3.11
ATXN3-253ENST00000621269 CCDC125Q86Z20 511 aa34.46■■■■□ 3.11
ATXN3-253ENST00000621269 COL14A1Q05707 1796 aaKnown RBP34.44■■■■□ 3.1
ATXN3-253ENST00000621269 CABP2Q9NPB3 220 aa34.44■■■■□ 3.1
ATXN3-253ENST00000621269 ONECUT3O60422 494 aaPredicted RBP34.43■■■■□ 3.1
ATXN3-253ENST00000621269 PRDM11Q9NQV5 511 aa34.43■■■■□ 3.1
ATXN3-253ENST00000621269 NUTM2GQ5VZR2 741 aa34.42■■■■□ 3.1
ATXN3-253ENST00000621269 PPIP5K1Q6PFW1 1433 aa34.4■■■■□ 3.1
ATXN3-253ENST00000621269 CRYBG1Q9Y4K1 1723 aa34.4■■■■□ 3.1
ATXN3-253ENST00000621269 QRICH2Q9H0J4 1663 aa34.4■■■■□ 3.1
ATXN3-253ENST00000621269 ROCK2O75116 1388 aaKnown RBP34.39■■■■□ 3.1
ATXN3-253ENST00000621269 A0A0G2JS52 829 aa34.39■■■■□ 3.1
ATXN3-253ENST00000621269 MYT1Q01538 1121 aa34.39■■■■□ 3.1
ATXN3-253ENST00000621269 TRPM1Q7Z4N2 1603 aa34.39■■■■□ 3.1
ATXN3-253ENST00000621269 ABTB2Q8N961 1025 aa34.38■■■■□ 3.09
ATXN3-253ENST00000621269 NRAPQ86VF7 1730 aa34.38■■■■□ 3.09
ATXN3-253ENST00000621269 KIAA0232Q92628 1395 aa34.36■■■■□ 3.09
ATXN3-253ENST00000621269 EP400Q96L91 3159 aa34.35■■■■□ 3.09
ATXN3-253ENST00000621269 FAM98CQ17RN3 349 aaKnown RBP34.35■■■■□ 3.09
ATXN3-253ENST00000621269 KRT27Q7Z3Y8 459 aa34.35■■■■□ 3.09
ATXN3-253ENST00000621269 EVC2Q86UK5 1308 aa34.33■■■■□ 3.09
ATXN3-253ENST00000621269 BRWD3Q6RI45 1802 aa34.33■■■■□ 3.09
ATXN3-253ENST00000621269 ZC3H6P61129 1189 aaKnown RBP34.33■■■■□ 3.09
ATXN3-253ENST00000621269 CHRNA2Q15822 529 aa34.32■■■■□ 3.08
ATXN3-253ENST00000621269 CABP1Q9NZU7 370 aa34.32■■■■□ 3.08
ATXN3-253ENST00000621269 PHRF1Q9P1Y6 1649 aaKnown RBP34.32■■■■□ 3.08
ATXN3-253ENST00000621269 SPATA31A5Q5VU36 1347 aa34.3■■■■□ 3.08
ATXN3-253ENST00000621269 SPATA31A7Q8IWB4 1347 aa34.3■■■■□ 3.08
ATXN3-253ENST00000621269 BLMP54132 1417 aaPredicted RBP34.3■■■■□ 3.08
ATXN3-253ENST00000621269 NLRP13Q86W25 1043 aa34.29■■■■□ 3.08
ATXN3-253ENST00000621269 BRD4O60885 1362 aaPredicted RBP34.28■■■■□ 3.08
ATXN3-253ENST00000621269 SF3B2Q13435 895 aaKnown RBP34.28■■■■□ 3.08
ATXN3-253ENST00000621269 STRN4Q9NRL3 753 aa34.26■■■■□ 3.08
ATXN3-253ENST00000621269 ZRANB1Q9UGI0 708 aa34.25■■■■□ 3.07
ATXN3-253ENST00000621269 USP19O94966 1318 aa34.24■■■■□ 3.07
ATXN3-253ENST00000621269 EVA1CP58658 441 aa34.23■■■■□ 3.07
ATXN3-253ENST00000621269 TONSLQ96HA7 1378 aa34.22■■■■□ 3.07
ATXN3-253ENST00000621269 USP6P35125 1406 aa34.21■■■■□ 3.07
ATXN3-253ENST00000621269 NRKQ7Z2Y5 1582 aa34.21■■■■□ 3.07
ATXN3-253ENST00000621269 SPATA31A1Q5TZJ5 1347 aa34.21■■■■□ 3.07
ATXN3-253ENST00000621269 GCP02774 474 aa34.2■■■■□ 3.07
ATXN3-253ENST00000621269 TRIM26Q12899 539 aaPredicted RBP34.19■■■■□ 3.06
ATXN3-253ENST00000621269 CPDO75976 1380 aa34.19■■■■□ 3.06
ATXN3-253ENST00000621269 CARD11Q9BXL7 1154 aa34.18■■■■□ 3.06
ATXN3-253ENST00000621269 NLRP6P59044 892 aa34.17■■■■□ 3.06
ATXN3-253ENST00000621269 DEFB132Q7Z7B7 95 aa34.16■■■■□ 3.06
ATXN3-253ENST00000621269 ZNF692Q9BU19 519 aaPredicted RBP34.16■■■■□ 3.06
ATXN3-253ENST00000621269 USP35Q9P2H5 1018 aa34.14■■■■□ 3.06
ATXN3-253ENST00000621269 SSH2Q76I76 1423 aa34.13■■■■□ 3.05
ATXN3-253ENST00000621269 THSD7AQ9UPZ6 1657 aa34.12■■■■□ 3.05
ATXN3-253ENST00000621269 CAMTA1Q9Y6Y1 1673 aa34.12■■■■□ 3.05
ATXN3-253ENST00000621269 ZBTB7CA1YPR0 619 aa34.1■■■■□ 3.05
ATXN3-253ENST00000621269 FAM182BQ5T319 152 aa34.1■■■■□ 3.05
ATXN3-253ENST00000621269 LARP1Q6PKG0 1096 aaKnown RBP34.1■■■■□ 3.05
ATXN3-253ENST00000621269 SBNO2Q9Y2G9 1366 aa34.08■■■■□ 3.05
ATXN3-253ENST00000621269 LMO7Q8WWI1 1683 aa34.07■■■■□ 3.04
ATXN3-253ENST00000621269 BAG6P46379 1132 aa34.07■■■■□ 3.04
ATXN3-253ENST00000621269 BARGINQ6ZT62 677 aa34.07■■■■□ 3.04
ATXN3-253ENST00000621269 TTC21BQ7Z4L5 1316 aa34.06■■■■□ 3.04
ATXN3-253ENST00000621269 TCP11L2Q8N4U5 519 aa34.05■■■■□ 3.04
ATXN3-253ENST00000621269 SLIT3O75094 1523 aa34.04■■■■□ 3.04
ATXN3-253ENST00000621269 TTC21AQ8NDW8 1320 aa34.04■■■■□ 3.04
ATXN3-253ENST00000621269 PIK3C2AO00443 1686 aa34.03■■■■□ 3.04
ATXN3-253ENST00000621269 KTN1Q86UP2 1357 aaKnown RBP34.03■■■■□ 3.04
ATXN3-253ENST00000621269 THRAP3Q9Y2W1 955 aaKnown RBP34.02■■■■□ 3.04
ATXN3-253ENST00000621269 CPSF1Q10570 1443 aaKnown RBP34.02■■■■□ 3.04
ATXN3-253ENST00000621269 COL5A2P05997 1499 aaPredicted RBP34.01■■■■□ 3.04
ATXN3-253ENST00000621269 AATKQ6ZMQ8 1374 aa34.01■■■■□ 3.04
ATXN3-253ENST00000621269 PDE3BQ13370 1112 aa34.01■■■■□ 3.03
ATXN3-253ENST00000621269 AKAP12Q02952 1782 aa34■■■■□ 3.03
ATXN3-253ENST00000621269 FAM196AQ6ZSG2 479 aa34■■■■□ 3.03
ATXN3-253ENST00000621269 KCNH5Q8NCM2 988 aa34■■■■□ 3.03
ATXN3-253ENST00000621269 RGPD1P0DJD0 1748 aa33.97■■■■□ 3.03
ATXN3-253ENST00000621269 TMC1Q8TDI8 760 aa33.97■■■■□ 3.03
ATXN3-253ENST00000621269 CRB1P82279 1406 aa33.96■■■■□ 3.03
ATXN3-253ENST00000621269 SOX12O15370 315 aa33.95■■■■□ 3.03
ATXN3-253ENST00000621269 EN1Q05925 392 aaPredicted RBP33.94■■■■□ 3.02
ATXN3-253ENST00000621269 TRIM37O94972 964 aa33.92■■■■□ 3.02
ATXN3-253ENST00000621269 TOM1L2Q6ZVM7 507 aa33.92■■■■□ 3.02
ATXN3-253ENST00000621269 HDGFL2Q7Z4V5 671 aaPredicted RBP33.92■■■■□ 3.02
ATXN3-253ENST00000621269 ARHGEF25Q86VW2 580 aa33.92■■■■□ 3.02
ATXN3-253ENST00000621269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.92■■■■□ 3.02
ATXN3-253ENST00000621269 AXIN2Q9Y2T1 843 aa33.9■■■■□ 3.02
ATXN3-253ENST00000621269 PUS7Q96PZ0 661 aaKnown RBP33.89■■■■□ 3.02
ATXN3-253ENST00000621269 SLC12A5Q9H2X9 1139 aa33.89■■■■□ 3.02
ATXN3-253ENST00000621269 MON2Q7Z3U7 1717 aa33.88■■■■□ 3.01
ATXN3-253ENST00000621269 TERF2IPQ9NYB0 399 aa33.87■■■■□ 3.01
ATXN3-253ENST00000621269 DISP2A7MBM2 1401 aa33.87■■■■□ 3.01
ATXN3-253ENST00000621269 WDR17Q8IZU2 1322 aa33.86■■■■□ 3.01
ATXN3-253ENST00000621269 COL18A1P39060 1754 aa33.86■■■■□ 3.01
ATXN3-253ENST00000621269 CD163L1Q9NR16 1453 aa33.86■■■■□ 3.01
ATXN3-253ENST00000621269 ST20-MTHFSA0A0A6YYL1 179 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms