RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 POLR3AO14802 1390 aaPredicted RBP29.33■■■□□ 2.29
SMC6-210ENST00000621152 ATAD2Q6PL18 1390 aa29.32■■■□□ 2.28
SMC6-210ENST00000621152 BTG4Q9NY30 223 aa29.32■■■□□ 2.28
SMC6-210ENST00000621152 RALGAPBQ86X10 1494 aa29.31■■■□□ 2.28
SMC6-210ENST00000621152 ITSN1Q15811 1721 aa29.31■■■□□ 2.28
SMC6-210ENST00000621152 ALS2Q96Q42 1657 aa29.31■■■□□ 2.28
SMC6-210ENST00000621152 CABP1Q9NZU7 370 aa29.29■■■□□ 2.28
SMC6-210ENST00000621152 EVC2Q86UK5 1308 aa29.28■■■□□ 2.28
SMC6-210ENST00000621152 ABTB2Q8N961 1025 aa29.28■■■□□ 2.28
SMC6-210ENST00000621152 PPIP5K1Q6PFW1 1433 aa29.28■■■□□ 2.28
SMC6-210ENST00000621152 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
SMC6-210ENST00000621152 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.27■■■□□ 2.28
SMC6-210ENST00000621152 TRPM1Q7Z4N2 1603 aa29.27■■■□□ 2.28
SMC6-210ENST00000621152 SEPT12Q8IYM1 358 aa29.26■■■□□ 2.27
SMC6-210ENST00000621152 ABCA3Q99758 1704 aa29.25■■■□□ 2.27
SMC6-210ENST00000621152 ONECUT3O60422 494 aaPredicted RBP29.24■■■□□ 2.27
SMC6-210ENST00000621152 GLI3P10071 1580 aa29.24■■■□□ 2.27
SMC6-210ENST00000621152 ZC3H6P61129 1189 aaKnown RBP29.24■■■□□ 2.27
SMC6-210ENST00000621152 TONSLQ96HA7 1378 aa29.24■■■□□ 2.27
SMC6-210ENST00000621152 CHRNA2Q15822 529 aa29.22■■■□□ 2.27
SMC6-210ENST00000621152 QRICH2Q9H0J4 1663 aa29.21■■■□□ 2.27
SMC6-210ENST00000621152 CARD11Q9BXL7 1154 aa29.21■■■□□ 2.27
SMC6-210ENST00000621152 PLCH1Q4KWH8 1693 aa29.21■■■□□ 2.27
SMC6-210ENST00000621152 TOPAZ1Q8N9V7 1692 aa29.21■■■□□ 2.27
SMC6-210ENST00000621152 NWD2Q9ULI1 1742 aa29.2■■■□□ 2.27
SMC6-210ENST00000621152 NLRP13Q86W25 1043 aa29.2■■■□□ 2.26
SMC6-210ENST00000621152 KIAA0232Q92628 1395 aa29.2■■■□□ 2.26
SMC6-210ENST00000621152 A0A0G2JS52 829 aa29.18■■■□□ 2.26
SMC6-210ENST00000621152 MYT1Q01538 1121 aa29.18■■■□□ 2.26
SMC6-210ENST00000621152 FAM98CQ17RN3 349 aaKnown RBP29.18■■■□□ 2.26
SMC6-210ENST00000621152 CCDC125Q86Z20 511 aa29.18■■■□□ 2.26
SMC6-210ENST00000621152 COL14A1Q05707 1796 aaKnown RBP29.16■■■□□ 2.26
SMC6-210ENST00000621152 EVA1CP58658 441 aa29.14■■■□□ 2.26
SMC6-210ENST00000621152 KRT27Q7Z3Y8 459 aa29.14■■■□□ 2.26
SMC6-210ENST00000621152 STRN4Q9NRL3 753 aa29.14■■■□□ 2.26
SMC6-210ENST00000621152 SPATA31A5Q5VU36 1347 aa29.14■■■□□ 2.25
SMC6-210ENST00000621152 SPATA31A7Q8IWB4 1347 aa29.14■■■□□ 2.25
SMC6-210ENST00000621152 BRD4O60885 1362 aaPredicted RBP29.13■■■□□ 2.25
SMC6-210ENST00000621152 GCP02774 474 aa29.13■■■□□ 2.25
SMC6-210ENST00000621152 NLRP6P59044 892 aa29.13■■■□□ 2.25
SMC6-210ENST00000621152 ZNF692Q9BU19 519 aaPredicted RBP29.13■■■□□ 2.25
SMC6-210ENST00000621152 CRYBG1Q9Y4K1 1723 aa29.12■■■□□ 2.25
SMC6-210ENST00000621152 USP19O94966 1318 aa29.1■■■□□ 2.25
SMC6-210ENST00000621152 USP6P35125 1406 aa29.1■■■□□ 2.25
SMC6-210ENST00000621152 NRAPQ86VF7 1730 aa29.08■■■□□ 2.25
SMC6-210ENST00000621152 PHRF1Q9P1Y6 1649 aaKnown RBP29.05■■■□□ 2.24
SMC6-210ENST00000621152 SPATA31A1Q5TZJ5 1347 aa29.05■■■□□ 2.24
SMC6-210ENST00000621152 TTC21BQ7Z4L5 1316 aa29.05■■■□□ 2.24
SMC6-210ENST00000621152 ZBTB7CA1YPR0 619 aa29.05■■■□□ 2.24
SMC6-210ENST00000621152 BRWD3Q6RI45 1802 aa29.05■■■□□ 2.24
SMC6-210ENST00000621152 CPDO75976 1380 aa29.04■■■□□ 2.24
SMC6-210ENST00000621152 USP35Q9P2H5 1018 aa29.04■■■□□ 2.24
SMC6-210ENST00000621152 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
SMC6-210ENST00000621152 SF3B2Q13435 895 aaKnown RBP29.03■■■□□ 2.24
SMC6-210ENST00000621152 SBNO2Q9Y2G9 1366 aa29.02■■■□□ 2.24
SMC6-210ENST00000621152 BLMP54132 1417 aaPredicted RBP29.02■■■□□ 2.24
SMC6-210ENST00000621152 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
SMC6-210ENST00000621152 TMC1Q8TDI8 760 aa29.01■■■□□ 2.23
SMC6-210ENST00000621152 FAM182BQ5T319 152 aa28.99■■■□□ 2.23
SMC6-210ENST00000621152 KTN1Q86UP2 1357 aaKnown RBP28.99■■■□□ 2.23
SMC6-210ENST00000621152 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
SMC6-210ENST00000621152 NRKQ7Z2Y5 1582 aa28.98■■■□□ 2.23
SMC6-210ENST00000621152 DEFB132Q7Z7B7 95 aa28.98■■■□□ 2.23
SMC6-210ENST00000621152 PCGF6Q9BYE7 350 aa28.98■■■□□ 2.23
SMC6-210ENST00000621152 TTC21AQ8NDW8 1320 aa28.97■■■□□ 2.23
SMC6-210ENST00000621152 CPSF1Q10570 1443 aaKnown RBP28.97■■■□□ 2.23
SMC6-210ENST00000621152 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
SMC6-210ENST00000621152 ZRANB1Q9UGI0 708 aa28.97■■■□□ 2.23
SMC6-210ENST00000621152 ST20-MTHFSA0A0A6YYL1 179 aa28.96■■■□□ 2.23
SMC6-210ENST00000621152 BARGINQ6ZT62 677 aa28.95■■■□□ 2.22
SMC6-210ENST00000621152 SOX12O15370 315 aa28.94■■■□□ 2.22
SMC6-210ENST00000621152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.94■■■□□ 2.22
SMC6-210ENST00000621152 TCP11L2Q8N4U5 519 aa28.94■■■□□ 2.22
SMC6-210ENST00000621152 KCNH5Q8NCM2 988 aa28.94■■■□□ 2.22
SMC6-210ENST00000621152 HDGFL2Q7Z4V5 671 aaPredicted RBP28.93■■■□□ 2.22
SMC6-210ENST00000621152 PUS7Q96PZ0 661 aaKnown RBP28.93■■■□□ 2.22
SMC6-210ENST00000621152 AATKQ6ZMQ8 1374 aa28.92■■■□□ 2.22
SMC6-210ENST00000621152 TESK2Q96S53 571 aa28.91■■■□□ 2.22
SMC6-210ENST00000621152 EP400Q96L91 3159 aa28.9■■■□□ 2.22
SMC6-210ENST00000621152 PDE3BQ13370 1112 aa28.9■■■□□ 2.22
SMC6-210ENST00000621152 ARHGEF25Q86VW2 580 aa28.9■■■□□ 2.22
SMC6-210ENST00000621152 SLIT3O75094 1523 aa28.89■■■□□ 2.22
SMC6-210ENST00000621152 SLC24A1O60721 1099 aa28.89■■■□□ 2.22
SMC6-210ENST00000621152 TERF2IPQ9NYB0 399 aa28.89■■■□□ 2.22
SMC6-210ENST00000621152 AXIN2Q9Y2T1 843 aa28.89■■■□□ 2.22
SMC6-210ENST00000621152 THRAP3Q9Y2W1 955 aaKnown RBP28.89■■■□□ 2.22
SMC6-210ENST00000621152 PIK3C2AO00443 1686 aa28.88■■■□□ 2.21
SMC6-210ENST00000621152 LMO7Q8WWI1 1683 aa28.88■■■□□ 2.21
SMC6-210ENST00000621152 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
SMC6-210ENST00000621152 BAG6P46379 1132 aa28.87■■■□□ 2.21
SMC6-210ENST00000621152 FAM196AQ6ZSG2 479 aa28.87■■■□□ 2.21
SMC6-210ENST00000621152 THSD7AQ9UPZ6 1657 aa28.86■■■□□ 2.21
SMC6-210ENST00000621152 COL5A2P05997 1499 aaPredicted RBP28.86■■■□□ 2.21
SMC6-210ENST00000621152 TOM1L2Q6ZVM7 507 aa28.86■■■□□ 2.21
SMC6-210ENST00000621152 NME9Q86XW9 330 aa28.86■■■□□ 2.21
SMC6-210ENST00000621152 CD163L1Q9NR16 1453 aa28.84■■■□□ 2.21
SMC6-210ENST00000621152 TIMELESSQ9UNS1 1208 aa28.83■■■□□ 2.21
SMC6-210ENST00000621152 CRB1P82279 1406 aa28.83■■■□□ 2.21
SMC6-210ENST00000621152 USP31Q70CQ4 1352 aa28.81■■■□□ 2.2
SMC6-210ENST00000621152 TRIM37O94972 964 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms