RNA–Protein interactions for RNA: ENST00000620962.1

ITM2C-210, Transcript of integral membrane protein 2C, humanhuman

BASIC

Gene ITM2C, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-210ENST00000620962 KRT27Q7Z3Y8 459 aa29.4■■■□□ 2.3
ITM2C-210ENST00000620962 SF3B2Q13435 895 aaKnown RBP29.39■■■□□ 2.3
ITM2C-210ENST00000620962 BTG4Q9NY30 223 aa29.38■■■□□ 2.29
ITM2C-210ENST00000620962 NGDNQ8NEJ9 315 aaKnown RBP29.37■■■□□ 2.29
ITM2C-210ENST00000620962 ATP7BP35670 1465 aa29.36■■■□□ 2.29
ITM2C-210ENST00000620962 DEFB132Q7Z7B7 95 aa29.36■■■□□ 2.29
ITM2C-210ENST00000620962 KIAA1210Q9ULL0 1709 aa29.32■■■□□ 2.28
ITM2C-210ENST00000620962 FAM98CQ17RN3 349 aaKnown RBP29.32■■■□□ 2.28
ITM2C-210ENST00000620962 NUDT16Q96DE0 195 aaKnown RBP29.31■■■□□ 2.28
ITM2C-210ENST00000620962 A0A0G2JS52 829 aa29.3■■■□□ 2.28
ITM2C-210ENST00000620962 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
ITM2C-210ENST00000620962 MYT1Q01538 1121 aa29.3■■■□□ 2.28
ITM2C-210ENST00000620962 SPATA31A5Q5VU36 1347 aa29.29■■■□□ 2.28
ITM2C-210ENST00000620962 SPATA31A7Q8IWB4 1347 aa29.29■■■□□ 2.28
ITM2C-210ENST00000620962 TOPAZ1Q8N9V7 1692 aa29.28■■■□□ 2.28
ITM2C-210ENST00000620962 THSD7AQ9UPZ6 1657 aa29.28■■■□□ 2.28
ITM2C-210ENST00000620962 PHRF1Q9P1Y6 1649 aaKnown RBP29.27■■■□□ 2.28
ITM2C-210ENST00000620962 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
ITM2C-210ENST00000620962 POLR3AO14802 1390 aaPredicted RBP29.26■■■□□ 2.27
ITM2C-210ENST00000620962 BAG6P46379 1132 aa29.25■■■□□ 2.27
ITM2C-210ENST00000620962 RGPD1P0DJD0 1748 aa29.25■■■□□ 2.27
ITM2C-210ENST00000620962 CDK19Q9BWU1 502 aa29.24■■■□□ 2.27
ITM2C-210ENST00000620962 KIAA0232Q92628 1395 aa29.22■■■□□ 2.27
ITM2C-210ENST00000620962 LRP5O75197 1615 aa29.21■■■□□ 2.27
ITM2C-210ENST00000620962 CCDC61Q9Y6R9 512 aa29.21■■■□□ 2.27
ITM2C-210ENST00000620962 ACEP12821 1306 aa29.19■■■□□ 2.26
ITM2C-210ENST00000620962 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
ITM2C-210ENST00000620962 SPATA31A1Q5TZJ5 1347 aa29.18■■■□□ 2.26
ITM2C-210ENST00000620962 NBPF8Q3BBV2 869 aa29.17■■■□□ 2.26
ITM2C-210ENST00000620962 DISP2A7MBM2 1401 aa29.16■■■□□ 2.26
ITM2C-210ENST00000620962 TNS1Q9HBL0 1735 aaKnown RBP29.16■■■□□ 2.26
ITM2C-210ENST00000620962 NRKQ7Z2Y5 1582 aa29.14■■■□□ 2.26
ITM2C-210ENST00000620962 CHRNA2Q15822 529 aa29.14■■■□□ 2.26
ITM2C-210ENST00000620962 ZC3H6P61129 1189 aaKnown RBP29.13■■■□□ 2.25
ITM2C-210ENST00000620962 NBPF1Q3BBV0 1214 aa29.12■■■□□ 2.25
ITM2C-210ENST00000620962 FAM182BQ5T319 152 aa29.12■■■□□ 2.25
ITM2C-210ENST00000620962 NUTM2GQ5VZR2 741 aa29.12■■■□□ 2.25
ITM2C-210ENST00000620962 EN1Q05925 392 aaPredicted RBP29.1■■■□□ 2.25
ITM2C-210ENST00000620962 STRN4Q9NRL3 753 aa29.1■■■□□ 2.25
ITM2C-210ENST00000620962 USP19O94966 1318 aa29.1■■■□□ 2.25
ITM2C-210ENST00000620962 CPDO75976 1380 aa29.1■■■□□ 2.25
ITM2C-210ENST00000620962 SSH2Q76I76 1423 aa29.1■■■□□ 2.25
ITM2C-210ENST00000620962 LMO7Q8WWI1 1683 aa29.09■■■□□ 2.25
ITM2C-210ENST00000620962 ABTB2Q8N961 1025 aa29.09■■■□□ 2.25
ITM2C-210ENST00000620962 PPIP5K1Q6PFW1 1433 aa29.07■■■□□ 2.24
ITM2C-210ENST00000620962 FAM196AQ6ZSG2 479 aa29.07■■■□□ 2.24
ITM2C-210ENST00000620962 BARGINQ6ZT62 677 aa29.07■■■□□ 2.24
ITM2C-210ENST00000620962 CENPJQ9HC77 1338 aaPredicted RBP29.07■■■□□ 2.24
ITM2C-210ENST00000620962 CAMTA1Q9Y6Y1 1673 aa29.07■■■□□ 2.24
ITM2C-210ENST00000620962 BRD4O60885 1362 aaPredicted RBP29.06■■■□□ 2.24
ITM2C-210ENST00000620962 PSDA5PKW4 1024 aaPredicted RBP29.06■■■□□ 2.24
ITM2C-210ENST00000620962 QRICH2Q9H0J4 1663 aa29.05■■■□□ 2.24
ITM2C-210ENST00000620962 SRPK2P78362 688 aaKnown RBP29.05■■■□□ 2.24
ITM2C-210ENST00000620962 EVA1CP58658 441 aa29.04■■■□□ 2.24
ITM2C-210ENST00000620962 NLRP13Q86W25 1043 aa29.03■■■□□ 2.24
ITM2C-210ENST00000620962 USP35Q9P2H5 1018 aa29.01■■■□□ 2.23
ITM2C-210ENST00000620962 TRIM37O94972 964 aa29■■■□□ 2.23
ITM2C-210ENST00000620962 GCP02774 474 aa29■■■□□ 2.23
ITM2C-210ENST00000620962 LARP1Q6PKG0 1096 aaKnown RBP29■■■□□ 2.23
ITM2C-210ENST00000620962 CABP2Q9NPB3 220 aa29■■■□□ 2.23
ITM2C-210ENST00000620962 PARD3Q8TEW0 1356 aa29■■■□□ 2.23
ITM2C-210ENST00000620962 EZH2Q15910 746 aaKnown RBP28.99■■■□□ 2.23
ITM2C-210ENST00000620962 TCP11L2Q8N4U5 519 aa28.99■■■□□ 2.23
ITM2C-210ENST00000620962 CAMKK2Q96RR4 588 aa28.99■■■□□ 2.23
ITM2C-210ENST00000620962 THRAP3Q9Y2W1 955 aaKnown RBP28.98■■■□□ 2.23
ITM2C-210ENST00000620962 PDE3BQ13370 1112 aa28.97■■■□□ 2.23
ITM2C-210ENST00000620962 COL5A2P05997 1499 aaPredicted RBP28.97■■■□□ 2.23
ITM2C-210ENST00000620962 USP6P35125 1406 aa28.96■■■□□ 2.23
ITM2C-210ENST00000620962 R3HDM1Q15032 1099 aaKnown RBP28.96■■■□□ 2.23
ITM2C-210ENST00000620962 PARP4Q9UKK3 1724 aaKnown RBP28.96■■■□□ 2.23
ITM2C-210ENST00000620962 RREB1Q92766 1687 aa28.95■■■□□ 2.22
ITM2C-210ENST00000620962 SLIT3O75094 1523 aa28.94■■■□□ 2.22
ITM2C-210ENST00000620962 CABP1Q9NZU7 370 aa28.93■■■□□ 2.22
ITM2C-210ENST00000620962 TRPM1Q7Z4N2 1603 aa28.93■■■□□ 2.22
ITM2C-210ENST00000620962 APBA3O96018 575 aa28.92■■■□□ 2.22
ITM2C-210ENST00000620962 L3MBTL2Q969R5 705 aa28.92■■■□□ 2.22
ITM2C-210ENST00000620962 CRB1P82279 1406 aa28.9■■■□□ 2.22
ITM2C-210ENST00000620962 PIK3C2AO00443 1686 aa28.89■■■□□ 2.22
ITM2C-210ENST00000620962 AATKQ6ZMQ8 1374 aa28.89■■■□□ 2.22
ITM2C-210ENST00000620962 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
ITM2C-210ENST00000620962 NLRP6P59044 892 aa28.89■■■□□ 2.22
ITM2C-210ENST00000620962 EVC2Q86UK5 1308 aa28.89■■■□□ 2.21
ITM2C-210ENST00000620962 C11orf95C9JLR9 678 aaPredicted RBP28.88■■■□□ 2.21
ITM2C-210ENST00000620962 COL18A1P39060 1754 aa28.87■■■□□ 2.21
ITM2C-210ENST00000620962 PEAK1Q9H792 1746 aa28.84■■■□□ 2.21
ITM2C-210ENST00000620962 AKAP12Q02952 1782 aa28.84■■■□□ 2.21
ITM2C-210ENST00000620962 LRRC37A3O60309 1634 aa28.83■■■□□ 2.21
ITM2C-210ENST00000620962 WNK3Q9BYP7 1800 aa28.81■■■□□ 2.2
ITM2C-210ENST00000620962 OVOS2A0A0G2JMS6 1433 aa28.81■■■□□ 2.2
ITM2C-210ENST00000620962 OVOS2A0A0J9YW53 1432 aa28.81■■■□□ 2.2
ITM2C-210ENST00000620962 OVOS2Q6IE36 1432 aa28.81■■■□□ 2.2
ITM2C-210ENST00000620962 ZNF692Q9BU19 519 aaPredicted RBP28.81■■■□□ 2.2
ITM2C-210ENST00000620962 SBF2Q86WG5 1849 aa28.8■■■□□ 2.2
ITM2C-210ENST00000620962 ROCK2O75116 1388 aaKnown RBP28.8■■■□□ 2.2
ITM2C-210ENST00000620962 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
ITM2C-210ENST00000620962 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
ITM2C-210ENST00000620962 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
ITM2C-210ENST00000620962 CPSF1Q10570 1443 aaKnown RBP28.78■■■□□ 2.2
ITM2C-210ENST00000620962 TTC21BQ7Z4L5 1316 aa28.78■■■□□ 2.2
ITM2C-210ENST00000620962 NBPF14Q5TI25 921 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms