RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 UNCXA6NJT0 531 aa6.42□□□□□ -1.38
LRRC39-204ENST00000620882 BHMG1C9JSJ3 638 aaPredicted RBP6.42□□□□□ -1.38
LRRC39-204ENST00000620882 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
LRRC39-204ENST00000620882 DESI1Q6ICB0 168 aa6.42□□□□□ -1.38
LRRC39-204ENST00000620882 ZFRQ96KR1 1074 aaKnown RBP6.42□□□□□ -1.38
LRRC39-204ENST00000620882 USP17L5A8MUK1 530 aa6.41□□□□□ -1.38
LRRC39-204ENST00000620882 NOM1Q5C9Z4 860 aaKnown RBP6.41□□□□□ -1.38
LRRC39-204ENST00000620882 KCNH8Q96L42 1107 aa6.41□□□□□ -1.38
LRRC39-204ENST00000620882 SLC4A5Q9BY07 1137 aa6.41□□□□□ -1.38
LRRC39-204ENST00000620882 FKBPLQ9UIM3 349 aa6.41□□□□□ -1.38
LRRC39-204ENST00000620882 ZBBXA8MT70 800 aa6.4□□□□□ -1.38
LRRC39-204ENST00000620882 PATL2C9JE40 543 aaKnown RBP6.4□□□□□ -1.38
LRRC39-204ENST00000620882 KCNH2Q12809 1159 aa6.4□□□□□ -1.38
LRRC39-204ENST00000620882 NOVA2Q9UNW9 492 aaKnown RBP6.4□□□□□ -1.38
LRRC39-204ENST00000620882 GNEQ9Y223 722 aaKnown RBP6.4□□□□□ -1.38
LRRC39-204ENST00000620882 SKIP12755 728 aa6.4□□□□□ -1.39
LRRC39-204ENST00000620882 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.39
LRRC39-204ENST00000620882 ACTN4O43707 911 aaKnown RBP6.39□□□□□ -1.39
LRRC39-204ENST00000620882 HDGFP51858 240 aaKnown RBP6.39□□□□□ -1.39
LRRC39-204ENST00000620882 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
LRRC39-204ENST00000620882 TXNDC2Q86VQ3 553 aa6.39□□□□□ -1.39
LRRC39-204ENST00000620882 RNF166Q96A37 237 aaPredicted RBP6.39□□□□□ -1.39
LRRC39-204ENST00000620882 NCOA4Q13772 614 aa6.38□□□□□ -1.39
LRRC39-204ENST00000620882 USB1Q9BQ65 265 aaKnown RBP6.38□□□□□ -1.39
LRRC39-204ENST00000620882 APLP1P51693 650 aa6.38□□□□□ -1.39
LRRC39-204ENST00000620882 ELOAQ14241 798 aaKnown RBP6.38□□□□□ -1.39
LRRC39-204ENST00000620882 BRICD5Q6PL45 260 aa6.38□□□□□ -1.39
LRRC39-204ENST00000620882 MARVELD3Q96A59 401 aa6.38□□□□□ -1.39
LRRC39-204ENST00000620882 THAP11Q96EK4 314 aa6.38□□□□□ -1.39
LRRC39-204ENST00000620882 ERBB3P21860 1342 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L15C9J2P7 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L10C9JJH3 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L13C9JLJ4 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L12C9JPN9 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L11C9JVI0 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L21D6R901 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L18D6R9N7 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L22D6RA61 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L17D6RBQ6 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L19D6RCP7 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L20D6RJB6 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 E9PSI1 815 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 SERPINB4P48594 390 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 USP17L24Q0WX57 530 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 PTK7Q13308 1070 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
LRRC39-204ENST00000620882 SSFA2P28290 1259 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 KMT5BQ4FZB7 885 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 PRDM9Q9NQV7 894 aa6.37□□□□□ -1.39
LRRC39-204ENST00000620882 POTEB3A0JP26 581 aa6.36□□□□□ -1.39
LRRC39-204ENST00000620882 POTEBQ6S5H4 581 aa6.36□□□□□ -1.39
LRRC39-204ENST00000620882 SCUBE3Q8IX30 993 aa6.36□□□□□ -1.39
LRRC39-204ENST00000620882 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
LRRC39-204ENST00000620882 PNMA1Q8ND90 353 aa6.36□□□□□ -1.39
LRRC39-204ENST00000620882 FAM196BA6NMK8 535 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 SNPHO15079 494 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 SLC4A3P48751 1232 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 CLDN10P78369 228 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 Q3C1V9 767 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 DNAJC14Q6Y2X3 702 aaPredicted RBP6.35□□□□□ -1.39
LRRC39-204ENST00000620882 LAPTM4BQ86VI4 370 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 PLEKHM2Q8IWE5 1019 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 PHTF2Q8N3S3 785 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 CEP126Q9P2H0 1117 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 AMOTL2Q9Y2J4 779 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 RASA1P20936 1047 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 KIAA1024Q9UPX6 916 aa6.35□□□□□ -1.39
LRRC39-204ENST00000620882 CTHP32929 405 aa6.34□□□□□ -1.39
LRRC39-204ENST00000620882 BCAMP50895 628 aa6.34□□□□□ -1.39
LRRC39-204ENST00000620882 LRCH3Q96II8 777 aa6.34□□□□□ -1.39
LRRC39-204ENST00000620882 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
LRRC39-204ENST00000620882 NBPF3Q9H094 633 aa6.34□□□□□ -1.39
LRRC39-204ENST00000620882 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.34□□□□□ -1.39
LRRC39-204ENST00000620882 LGR5O75473 907 aa6.33□□□□□ -1.4
LRRC39-204ENST00000620882 JUNDP17535 347 aa6.33□□□□□ -1.4
LRRC39-204ENST00000620882 PTPRNQ16849 979 aa6.33□□□□□ -1.4
LRRC39-204ENST00000620882 FAM160A2Q8N612 972 aaPredicted RBP6.33□□□□□ -1.4
LRRC39-204ENST00000620882 PLPP7Q8NBV4 271 aa6.33□□□□□ -1.4
LRRC39-204ENST00000620882 MRPL50Q8N5N7 158 aaKnown RBP6.33□□□□□ -1.4
LRRC39-204ENST00000620882 KIAA1522Q9P206 1035 aaPredicted RBP6.33□□□□□ -1.4
LRRC39-204ENST00000620882 DPYDQ12882 1025 aa6.32□□□□□ -1.4
LRRC39-204ENST00000620882 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
LRRC39-204ENST00000620882 FAM205CA6NFA0 338 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 DKK1O94907 266 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 TRAF7Q6Q0C0 670 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 OGFOD1Q8N543 542 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 SALL2Q9Y467 1007 aaPredicted RBP6.31□□□□□ -1.4
LRRC39-204ENST00000620882 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 SOWAHDA6NJG2 315 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 SLFNL1Q499Z3 407 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 ZNF687Q8N1G0 1237 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 ADAM32Q8TC27 787 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 CCER1Q8TC90 406 aaPredicted RBP6.31□□□□□ -1.4
LRRC39-204ENST00000620882 CLP1Q92989 425 aaKnown RBP6.31□□□□□ -1.4
LRRC39-204ENST00000620882 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
LRRC39-204ENST00000620882 HRO43593 1189 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 ATP2B4P23634 1241 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 EMP3P54852 163 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 ADGRD1Q6QNK2 874 aa6.3□□□□□ -1.4
LRRC39-204ENST00000620882 ANKMY2Q8IV38 441 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms