RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 TMF1P82094 1093 aa15.16■□□□□ 0.02
TARDBP-223ENST00000620632 CABLES1Q8TDN4 633 aa15.15■□□□□ 0.02
TARDBP-223ENST00000620632 PUS7Q96PZ0 661 aaKnown RBP15.15■□□□□ 0.02
TARDBP-223ENST00000620632 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
TARDBP-223ENST00000620632 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
TARDBP-223ENST00000620632 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
TARDBP-223ENST00000620632 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
TARDBP-223ENST00000620632 RGS17Q9UGC6 210 aaPredicted RBP15.14■□□□□ 0.01
TARDBP-223ENST00000620632 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
TARDBP-223ENST00000620632 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
TARDBP-223ENST00000620632 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
TARDBP-223ENST00000620632 C11orf95C9JLR9 678 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-223ENST00000620632 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
TARDBP-223ENST00000620632 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
TARDBP-223ENST00000620632 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
TARDBP-223ENST00000620632 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
TARDBP-223ENST00000620632 PLCH1Q4KWH8 1693 aa15.1■□□□□ 0.01
TARDBP-223ENST00000620632 USP54Q70EL1 1684 aa15.1■□□□□ 0.01
TARDBP-223ENST00000620632 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
TARDBP-223ENST00000620632 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-223ENST00000620632 NINLQ9Y2I6 1382 aa15.1■□□□□ 0.01
TARDBP-223ENST00000620632 C8orf37Q96NL8 207 aa15.09■□□□□ 0.01
TARDBP-223ENST00000620632 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-223ENST00000620632 TTC21BQ7Z4L5 1316 aa15.09■□□□□ 0.01
TARDBP-223ENST00000620632 ABTB2Q8N961 1025 aa15.08■□□□□ 0
TARDBP-223ENST00000620632 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
TARDBP-223ENST00000620632 ANKRD36BQ8N2N9 1353 aa15.08■□□□□ 0
TARDBP-223ENST00000620632 SLIT3O75094 1523 aa15.07■□□□□ 0
TARDBP-223ENST00000620632 USP19O94966 1318 aa15.07■□□□□ 0
TARDBP-223ENST00000620632 EDC4Q6P2E9 1401 aaKnown RBP15.07■□□□□ 0
TARDBP-223ENST00000620632 NRAPQ86VF7 1730 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 CDCA8Q53HL2 280 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 POTEAQ6S8J7 498 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 HDGFL2Q7Z4V5 671 aaPredicted RBP15.06■□□□□ 0
TARDBP-223ENST00000620632 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 AFF2P51816 1311 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.06■□□□□ 0
TARDBP-223ENST00000620632 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
TARDBP-223ENST00000620632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
TARDBP-223ENST00000620632 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
TARDBP-223ENST00000620632 TTC21AQ8NDW8 1320 aa15.05■□□□□ -0
TARDBP-223ENST00000620632 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
TARDBP-223ENST00000620632 SLIT2O94813 1529 aa15.04■□□□□ -0
TARDBP-223ENST00000620632 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
TARDBP-223ENST00000620632 ILDR2Q71H61 639 aa15.04■□□□□ -0
TARDBP-223ENST00000620632 NME9Q86XW9 330 aa15.04■□□□□ -0
TARDBP-223ENST00000620632 POLR3GLQ9BT43 218 aa15.04■□□□□ -0
TARDBP-223ENST00000620632 KIF7Q2M1P5 1343 aa15.03■□□□□ -0
TARDBP-223ENST00000620632 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
TARDBP-223ENST00000620632 NLRP6P59044 892 aa15.03■□□□□ -0
TARDBP-223ENST00000620632 NGLY1Q96IV0 654 aa15.03■□□□□ -0
TARDBP-223ENST00000620632 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
TARDBP-223ENST00000620632 NFAT5O94916 1531 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 USP31Q70CQ4 1352 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 KIAA0232Q92628 1395 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 FAM83GA6ND36 823 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 NLRP13Q86W25 1043 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 FNBP4Q8N3X1 1017 aaPredicted RBP15.02■□□□□ -0
TARDBP-223ENST00000620632 CARD14Q9BXL6 1004 aa15.02■□□□□ -0
TARDBP-223ENST00000620632 COL18A1P39060 1754 aa15.02□□□□□ -0.01
TARDBP-223ENST00000620632 RGPD5Q99666 1765 aa15.02□□□□□ -0.01
TARDBP-223ENST00000620632 OVOS2A0A0J9YW53 1432 aa15.01□□□□□ -0.01
TARDBP-223ENST00000620632 OVOS2Q6IE36 1432 aa15.01□□□□□ -0.01
TARDBP-223ENST00000620632 LTN1O94822 1766 aa15.01□□□□□ -0.01
TARDBP-223ENST00000620632 GCP02774 474 aa15□□□□□ -0.01
TARDBP-223ENST00000620632 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
TARDBP-223ENST00000620632 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
TARDBP-223ENST00000620632 CHRNA2Q15822 529 aa14.99□□□□□ -0.01
TARDBP-223ENST00000620632 ZNF772Q68DY9 489 aaPredicted RBP14.99□□□□□ -0.01
TARDBP-223ENST00000620632 USP21Q9UK80 565 aa14.99□□□□□ -0.01
TARDBP-223ENST00000620632 ATRNO75882 1429 aa14.99□□□□□ -0.01
TARDBP-223ENST00000620632 CPDO75976 1380 aa14.98□□□□□ -0.01
TARDBP-223ENST00000620632 WASHC2AQ641Q2 1341 aa14.98□□□□□ -0.01
TARDBP-223ENST00000620632 ANKRD26Q9UPS8 1709 aa14.98□□□□□ -0.01
TARDBP-223ENST00000620632 CAMTA1Q9Y6Y1 1673 aa14.98□□□□□ -0.01
TARDBP-223ENST00000620632 CCDC7Q96M83 1385 aa14.98□□□□□ -0.01
TARDBP-223ENST00000620632 SOX12O15370 315 aa14.97□□□□□ -0.01
TARDBP-223ENST00000620632 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
TARDBP-223ENST00000620632 GLI3P10071 1580 aa14.97□□□□□ -0.01
TARDBP-223ENST00000620632 FYB1O15117 783 aa14.96□□□□□ -0.01
TARDBP-223ENST00000620632 PANK3Q9H999 370 aa14.96□□□□□ -0.01
TARDBP-223ENST00000620632 UNC5CLQ8IV45 518 aa14.95□□□□□ -0.02
TARDBP-223ENST00000620632 GGNBP2Q9H3C7 697 aa14.95□□□□□ -0.02
TARDBP-223ENST00000620632 QTRT2Q9H974 415 aaKnown RBP14.95□□□□□ -0.02
TARDBP-223ENST00000620632 BTG4Q9NY30 223 aa14.95□□□□□ -0.02
TARDBP-223ENST00000620632 FBLN1P23142 703 aa14.93□□□□□ -0.02
TARDBP-223ENST00000620632 ARHGEF25Q86VW2 580 aa14.93□□□□□ -0.02
TARDBP-223ENST00000620632 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
TARDBP-223ENST00000620632 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
TARDBP-223ENST00000620632 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
TARDBP-223ENST00000620632 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
TARDBP-223ENST00000620632 COL5A2P05997 1499 aaPredicted RBP14.92□□□□□ -0.02
TARDBP-223ENST00000620632 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
TARDBP-223ENST00000620632 PEAK1Q9H792 1746 aa14.92□□□□□ -0.02
TARDBP-223ENST00000620632 RGS12O14924 1447 aa14.92□□□□□ -0.02
TARDBP-223ENST00000620632 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
TARDBP-223ENST00000620632 COG3Q96JB2 828 aa14.91□□□□□ -0.02
TARDBP-223ENST00000620632 AXIN2Q9Y2T1 843 aa14.91□□□□□ -0.02
TARDBP-223ENST00000620632 BRWD3Q6RI45 1802 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms