RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 PRKAR2BP31323 418 aa16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 SNX21Q969T3 373 aa16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 ZNF830Q96NB3 372 aaPredicted RBP16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 NEK4P51957 841 aa16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.19
CYFIP1-211ENST00000619348 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
CYFIP1-211ENST00000619348 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
CYFIP1-211ENST00000619348 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
CYFIP1-211ENST00000619348 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
CYFIP1-211ENST00000619348 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
CYFIP1-211ENST00000619348 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
CYFIP1-211ENST00000619348 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
CYFIP1-211ENST00000619348 ADGBQ8N7X0 1667 aa16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 RABEP1Q15276 862 aa16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
CYFIP1-211ENST00000619348 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
CYFIP1-211ENST00000619348 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
CYFIP1-211ENST00000619348 ATAD2Q6PL18 1390 aa16.23■□□□□ 0.19
CYFIP1-211ENST00000619348 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
CYFIP1-211ENST00000619348 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
CYFIP1-211ENST00000619348 CBX1P83916 185 aa16.22■□□□□ 0.19
CYFIP1-211ENST00000619348 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
CYFIP1-211ENST00000619348 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
CYFIP1-211ENST00000619348 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
CYFIP1-211ENST00000619348 TRPM1Q7Z4N2 1603 aa16.21■□□□□ 0.19
CYFIP1-211ENST00000619348 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
CYFIP1-211ENST00000619348 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.18
CYFIP1-211ENST00000619348 TSPYL6Q8N831 410 aa16.21■□□□□ 0.18
CYFIP1-211ENST00000619348 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 OTUD7AQ8TE49 926 aaPredicted RBP16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 SCAPERQ9BY12 1400 aa16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 DTNBO60941 627 aa16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 MAP7D2Q96T17 732 aa16.2■□□□□ 0.18
CYFIP1-211ENST00000619348 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 C17orf53Q8N3J3 647 aaPredicted RBP16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 NUP160Q12769 1436 aa16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 IGSF3O75054 1194 aa16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
CYFIP1-211ENST00000619348 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 SYAP1Q96A49 352 aaPredicted RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
CYFIP1-211ENST00000619348 REC8O95072 547 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 PPP1R9BQ96SB3 815 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 E9PCH4 1651 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 DRC7Q8IY82 874 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 TSPY26PQ9H489 355 aa16.17■□□□□ 0.18
CYFIP1-211ENST00000619348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
CYFIP1-211ENST00000619348 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
CYFIP1-211ENST00000619348 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
CYFIP1-211ENST00000619348 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
CYFIP1-211ENST00000619348 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
CYFIP1-211ENST00000619348 KIF2CQ99661 725 aa16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 NOL7Q9UMY1 257 aaKnown RBP16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 MCCP23508 829 aa16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
CYFIP1-211ENST00000619348 ABCC2Q92887 1545 aa16.14■□□□□ 0.18
CYFIP1-211ENST00000619348 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
CYFIP1-211ENST00000619348 NSFL1CQ9UNZ2 370 aaKnown RBP16.14■□□□□ 0.17
CYFIP1-211ENST00000619348 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
CYFIP1-211ENST00000619348 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
CYFIP1-211ENST00000619348 ZBTB7BO15156 539 aaPredicted RBP16.13■□□□□ 0.17
CYFIP1-211ENST00000619348 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
CYFIP1-211ENST00000619348 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
CYFIP1-211ENST00000619348 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
CYFIP1-211ENST00000619348 SDSP20132 328 aa16.13■□□□□ 0.17
CYFIP1-211ENST00000619348 FIBPO43427 364 aa16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 EIF2AK4Q9P2K8 1649 aaKnown RBP16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 LRSAM1Q6UWE0 723 aa16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
CYFIP1-211ENST00000619348 GNAI1P63096 354 aa16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 MBD3O95983 291 aa16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 PLEKHM2Q8IWE5 1019 aa16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
CYFIP1-211ENST00000619348 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms