RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 FAM83GA6ND36 823 aa6.34□□□□□ -1.4
SYCP1-210ENST00000618516 STAC3Q96MF2 364 aa6.34□□□□□ -1.4
SYCP1-210ENST00000618516 NLRP2Q9NX02 1062 aa6.34□□□□□ -1.4
SYCP1-210ENST00000618516 TERF2IPQ9NYB0 399 aa6.34□□□□□ -1.4
SYCP1-210ENST00000618516 PTCH1Q13635 1447 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 DIP2AQ14689 1571 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 JCADQ9P266 1359 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 CLSPNQ9HAW4 1339 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 GCP02774 474 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 AMPHP49418 695 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 NALCNQ8IZF0 1738 aa6.33□□□□□ -1.4
SYCP1-210ENST00000618516 TOM1L2Q6ZVM7 507 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 KIAA0232Q92628 1395 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 RGPD8O14715 1765 aaPredicted RBP6.32□□□□□ -1.4
SYCP1-210ENST00000618516 KIF7Q2M1P5 1343 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 SPATA31A3Q5VYP0 1347 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 NLRP13Q86W25 1043 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 COG3Q96JB2 828 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 FAM135BQ49AJ0 1406 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 TTC21BQ7Z4L5 1316 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
SYCP1-210ENST00000618516 CARD14Q9BXL6 1004 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 RGS17Q9UGC6 210 aaPredicted RBP6.32□□□□□ -1.4
SYCP1-210ENST00000618516 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
SYCP1-210ENST00000618516 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
SYCP1-210ENST00000618516 LARP1Q6PKG0 1096 aaKnown RBP6.31□□□□□ -1.4
SYCP1-210ENST00000618516 XIRP1Q702N8 1843 aaKnown RBP6.31□□□□□ -1.4
SYCP1-210ENST00000618516 NRXN1Q9ULB1 1477 aa6.31□□□□□ -1.4
SYCP1-210ENST00000618516 SOS2Q07890 1332 aaPredicted RBP6.31□□□□□ -1.4
SYCP1-210ENST00000618516 WASHC2AQ641Q2 1341 aa6.31□□□□□ -1.4
SYCP1-210ENST00000618516 AXIN2Q9Y2T1 843 aa6.31□□□□□ -1.4
SYCP1-210ENST00000618516 MORC1Q86VD1 984 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 SALL2Q9Y467 1007 aaPredicted RBP6.3□□□□□ -1.4
SYCP1-210ENST00000618516 PNPLA6Q8IY17 1366 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 RALGAPBQ86X10 1494 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
SYCP1-210ENST00000618516 XRN1Q8IZH2 1706 aaKnown RBP6.3□□□□□ -1.4
SYCP1-210ENST00000618516 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
SYCP1-210ENST00000618516 RXRBP28702 533 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 CDCA8Q53HL2 280 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 HSP90AB2PQ58FF8 381 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 ATP7BP35670 1465 aa6.3□□□□□ -1.4
SYCP1-210ENST00000618516 KDM5AP29375 1690 aaKnown RBP6.29□□□□□ -1.4
SYCP1-210ENST00000618516 FYB1O15117 783 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 IFT172Q9UG01 1749 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 TECPR2O15040 1411 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 NSD3Q9BZ95 1437 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 ATAD2Q6PL18 1390 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 PHLPP1O60346 1717 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 TULP4Q9NRJ4 1543 aa6.29□□□□□ -1.4
SYCP1-210ENST00000618516 LRP6O75581 1613 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 PLEKHG3A1L390 1219 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 SIRT1Q96EB6 747 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 TRPM1Q7Z4N2 1603 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 HMOX1P09601 288 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 ACSBG1Q96GR2 724 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 SETD1AO15047 1707 aaKnown RBP6.28□□□□□ -1.4
SYCP1-210ENST00000618516 NWD1Q149M9 1564 aa6.28□□□□□ -1.4
SYCP1-210ENST00000618516 ZNF692Q9BU19 519 aaPredicted RBP6.28□□□□□ -1.4
SYCP1-210ENST00000618516 TNS3Q68CZ2 1445 aa6.27□□□□□ -1.41
SYCP1-210ENST00000618516 KCNQ4P56696 695 aa6.27□□□□□ -1.41
SYCP1-210ENST00000618516 NEUROD2Q15784 382 aa6.27□□□□□ -1.41
SYCP1-210ENST00000618516 QRICH2Q9H0J4 1663 aa6.27□□□□□ -1.41
SYCP1-210ENST00000618516 ARHGEF28Q8N1W1 1705 aaKnown RBP6.27□□□□□ -1.41
SYCP1-210ENST00000618516 CNKSR2Q8WXI2 1034 aa6.27□□□□□ -1.41
SYCP1-210ENST00000618516 SEPT12Q8IYM1 358 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 CGNL1Q0VF96 1302 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 MAP3K19Q56UN5 1328 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 SPATA31A6Q5VVP1 1343 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 USP6P35125 1406 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 DCCP43146 1447 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
SYCP1-210ENST00000618516 PDE3BQ13370 1112 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 ZNF772Q68DY9 489 aaPredicted RBP6.26□□□□□ -1.41
SYCP1-210ENST00000618516 DEFB132Q7Z7B7 95 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 UNC5CLQ8IV45 518 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
SYCP1-210ENST00000618516 TRPC5Q9UL62 973 aaPredicted RBP6.26□□□□□ -1.41
SYCP1-210ENST00000618516 GJD4Q96KN9 370 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-210ENST00000618516 MTHFSP49914 203 aa6.25□□□□□ -1.41
SYCP1-210ENST00000618516 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
SYCP1-210ENST00000618516 TRIM37O94972 964 aa6.25□□□□□ -1.41
SYCP1-210ENST00000618516 ZNF316A6NFI3 1004 aaPredicted RBP6.24□□□□□ -1.41
SYCP1-210ENST00000618516 CDC42BPGQ6DT37 1551 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 PTF1AQ7RTS3 328 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 CCDC7Q96M83 1385 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 SBNO2Q9Y2G9 1366 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 NCOA3Q9Y6Q9 1424 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 LAMC1P11047 1609 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 PXDNQ92626 1479 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 AEBP1Q8IUX7 1158 aa6.24□□□□□ -1.41
SYCP1-210ENST00000618516 RBM6P78332 1123 aaKnown RBP6.23□□□□□ -1.41
SYCP1-210ENST00000618516 MED1Q15648 1581 aaPredicted RBP6.23□□□□□ -1.41
SYCP1-210ENST00000618516 USP32Q8NFA0 1604 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 ANKARQ7Z5J8 1434 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 NBPF6Q5VWK0 638 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 CCDC146Q8IYE0 955 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms