RNA–Protein interactions for RNA: ENST00000618311.4

LCA10-201, Transcript of Putative lung carcinoma-associated protein 10, humanhuman

TSL 2 BASIC

Gene LCA10, Length 1,392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10-201ENST00000618311 UPF1Q92900 1129 aaKnown RBP eCLIP24.3■■□□□ 1.48
LCA10-201ENST00000618311 EVC2Q86UK5 1308 aa24.3■■□□□ 1.48
LCA10-201ENST00000618311 ALS2Q96Q42 1657 aa24.29■■□□□ 1.48
LCA10-201ENST00000618311 QRICH2Q9H0J4 1663 aa24.29■■□□□ 1.48
LCA10-201ENST00000618311 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
LCA10-201ENST00000618311 FAM83GA6ND36 823 aa24.28■■□□□ 1.48
LCA10-201ENST00000618311 PPIP5K1Q6PFW1 1433 aa24.28■■□□□ 1.48
LCA10-201ENST00000618311 ABCA3Q99758 1704 aa24.26■■□□□ 1.47
LCA10-201ENST00000618311 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.26■■□□□ 1.47
LCA10-201ENST00000618311 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
LCA10-201ENST00000618311 VPS72Q15906 364 aa24.25■■□□□ 1.47
LCA10-201ENST00000618311 CCDC9Q9Y3X0 531 aaKnown RBP24.24■■□□□ 1.47
LCA10-201ENST00000618311 RALGAPBQ86X10 1494 aa24.23■■□□□ 1.47
LCA10-201ENST00000618311 ATAD2Q6PL18 1390 aa24.23■■□□□ 1.47
LCA10-201ENST00000618311 CABP1Q9NZU7 370 aa24.23■■□□□ 1.47
LCA10-201ENST00000618311 ABTB2Q8N961 1025 aa24.22■■□□□ 1.47
LCA10-201ENST00000618311 PRDM11Q9NQV5 511 aa24.22■■□□□ 1.47
LCA10-201ENST00000618311 NWD2Q9ULI1 1742 aa24.21■■□□□ 1.47
LCA10-201ENST00000618311 NUTM2GQ5VZR2 741 aa24.21■■□□□ 1.47
LCA10-201ENST00000618311 BTG4Q9NY30 223 aa24.21■■□□□ 1.47
LCA10-201ENST00000618311 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.47
LCA10-201ENST00000618311 PLCH1Q4KWH8 1693 aa24.2■■□□□ 1.46
LCA10-201ENST00000618311 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
LCA10-201ENST00000618311 NLRP13Q86W25 1043 aa24.17■■□□□ 1.46
LCA10-201ENST00000618311 COL14A1Q05707 1796 aaKnown RBP24.17■■□□□ 1.46
LCA10-201ENST00000618311 GLI3P10071 1580 aa24.16■■□□□ 1.46
LCA10-201ENST00000618311 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
LCA10-201ENST00000618311 KIAA0232Q92628 1395 aa24.15■■□□□ 1.46
LCA10-201ENST00000618311 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
LCA10-201ENST00000618311 CRYBG1Q9Y4K1 1723 aa24.15■■□□□ 1.46
LCA10-201ENST00000618311 USP6P35125 1406 aa24.14■■□□□ 1.46
LCA10-201ENST00000618311 SEPT12Q8IYM1 358 aa24.14■■□□□ 1.45
LCA10-201ENST00000618311 ZNF692Q9BU19 519 aaPredicted RBP24.14■■□□□ 1.45
LCA10-201ENST00000618311 ONECUT3O60422 494 aaPredicted RBP24.12■■□□□ 1.45
LCA10-201ENST00000618311 USP19O94966 1318 aa24.12■■□□□ 1.45
LCA10-201ENST00000618311 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
LCA10-201ENST00000618311 A0A0G2JS52 829 aa24.11■■□□□ 1.45
LCA10-201ENST00000618311 MYT1Q01538 1121 aa24.11■■□□□ 1.45
LCA10-201ENST00000618311 PHRF1Q9P1Y6 1649 aaKnown RBP24.1■■□□□ 1.45
LCA10-201ENST00000618311 NLRP6P59044 892 aa24.1■■□□□ 1.45
LCA10-201ENST00000618311 GCP02774 474 aa24.09■■□□□ 1.45
LCA10-201ENST00000618311 NRAPQ86VF7 1730 aa24.08■■□□□ 1.45
LCA10-201ENST00000618311 CCDC125Q86Z20 511 aa24.08■■□□□ 1.45
LCA10-201ENST00000618311 CPDO75976 1380 aa24.08■■□□□ 1.44
LCA10-201ENST00000618311 SPATA31A5Q5VU36 1347 aa24.07■■□□□ 1.44
LCA10-201ENST00000618311 SPATA31A7Q8IWB4 1347 aa24.07■■□□□ 1.44
LCA10-201ENST00000618311 FAM98CQ17RN3 349 aaKnown RBP24.07■■□□□ 1.44
LCA10-201ENST00000618311 SLC24A1O60721 1099 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 EVA1CP58658 441 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 STRN4Q9NRL3 753 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 EP400Q96L91 3159 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 SSH2Q76I76 1423 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 CLSPNQ9HAW4 1339 aa24.06■■□□□ 1.44
LCA10-201ENST00000618311 KRT27Q7Z3Y8 459 aa24.05■■□□□ 1.44
LCA10-201ENST00000618311 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
LCA10-201ENST00000618311 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
LCA10-201ENST00000618311 KTN1Q86UP2 1357 aaKnown RBP24.04■■□□□ 1.44
LCA10-201ENST00000618311 TTC21AQ8NDW8 1320 aa24.04■■□□□ 1.44
LCA10-201ENST00000618311 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
LCA10-201ENST00000618311 TMC1Q8TDI8 760 aa24.03■■□□□ 1.44
LCA10-201ENST00000618311 TIMELESSQ9UNS1 1208 aa24.03■■□□□ 1.44
LCA10-201ENST00000618311 PUS7Q96PZ0 661 aaKnown RBP24.03■■□□□ 1.44
LCA10-201ENST00000618311 ST20-MTHFSA0A0A6YYL1 179 aa24.02■■□□□ 1.44
LCA10-201ENST00000618311 SPATA31A1Q5TZJ5 1347 aa24.01■■□□□ 1.43
LCA10-201ENST00000618311 HDGFL2Q7Z4V5 671 aaPredicted RBP24■■□□□ 1.43
LCA10-201ENST00000618311 ZBTB7CA1YPR0 619 aa23.99■■□□□ 1.43
LCA10-201ENST00000618311 KCNH5Q8NCM2 988 aa23.99■■□□□ 1.43
LCA10-201ENST00000618311 BRWD3Q6RI45 1802 aa23.98■■□□□ 1.43
LCA10-201ENST00000618311 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
LCA10-201ENST00000618311 TESK2Q96S53 571 aa23.98■■□□□ 1.43
LCA10-201ENST00000618311 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
LCA10-201ENST00000618311 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
LCA10-201ENST00000618311 BLMP54132 1417 aaPredicted RBP23.98■■□□□ 1.43
LCA10-201ENST00000618311 SLIT3O75094 1523 aa23.97■■□□□ 1.43
LCA10-201ENST00000618311 PIK3C2AO00443 1686 aa23.97■■□□□ 1.43
LCA10-201ENST00000618311 CAMTA1Q9Y6Y1 1673 aa23.97■■□□□ 1.43
LCA10-201ENST00000618311 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
LCA10-201ENST00000618311 SLC12A5Q9H2X9 1139 aa23.96■■□□□ 1.43
LCA10-201ENST00000618311 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
LCA10-201ENST00000618311 LARP1Q6PKG0 1096 aaKnown RBP23.95■■□□□ 1.42
LCA10-201ENST00000618311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.42
LCA10-201ENST00000618311 USP47Q96K76 1375 aa23.94■■□□□ 1.42
LCA10-201ENST00000618311 LMO7Q8WWI1 1683 aa23.93■■□□□ 1.42
LCA10-201ENST00000618311 BARGINQ6ZT62 677 aa23.93■■□□□ 1.42
LCA10-201ENST00000618311 TCP11L2Q8N4U5 519 aa23.93■■□□□ 1.42
LCA10-201ENST00000618311 NINLQ9Y2I6 1382 aa23.93■■□□□ 1.42
LCA10-201ENST00000618311 SOX12O15370 315 aa23.92■■□□□ 1.42
LCA10-201ENST00000618311 CD163L1Q9NR16 1453 aa23.92■■□□□ 1.42
LCA10-201ENST00000618311 THRAP3Q9Y2W1 955 aaKnown RBP23.91■■□□□ 1.42
LCA10-201ENST00000618311 COL5A2P05997 1499 aaPredicted RBP23.91■■□□□ 1.42
LCA10-201ENST00000618311 TMF1P82094 1093 aa23.91■■□□□ 1.42
LCA10-201ENST00000618311 ARHGEF25Q86VW2 580 aa23.91■■□□□ 1.42
LCA10-201ENST00000618311 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
LCA10-201ENST00000618311 EDC4Q6P2E9 1401 aaKnown RBP23.9■■□□□ 1.42
LCA10-201ENST00000618311 THSD7AQ9UPZ6 1657 aa23.9■■□□□ 1.42
LCA10-201ENST00000618311 MON2Q7Z3U7 1717 aa23.9■■□□□ 1.42
LCA10-201ENST00000618311 A0A1W2PP64 1363 aa23.89■■□□□ 1.41
LCA10-201ENST00000618311 USP31Q70CQ4 1352 aa23.89■■□□□ 1.41
LCA10-201ENST00000618311 CRB1P82279 1406 aa23.88■■□□□ 1.41
LCA10-201ENST00000618311 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms