RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 CD163L1Q9NR16 1453 aa10.34□□□□□ -0.75
VPS45-213ENST00000618148 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
VPS45-213ENST00000618148 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
VPS45-213ENST00000618148 C19orf44Q9H6X5 657 aa10.33□□□□□ -0.76
VPS45-213ENST00000618148 ANKRD36BQ8N2N9 1353 aa10.33□□□□□ -0.76
VPS45-213ENST00000618148 CPSF1Q10570 1443 aaKnown RBP10.33□□□□□ -0.76
VPS45-213ENST00000618148 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
VPS45-213ENST00000618148 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
VPS45-213ENST00000618148 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
VPS45-213ENST00000618148 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
VPS45-213ENST00000618148 NPC1L1Q9UHC9 1359 aa10.31□□□□□ -0.76
VPS45-213ENST00000618148 PPIP5K1Q6PFW1 1433 aa10.31□□□□□ -0.76
VPS45-213ENST00000618148 PLEKHG3A1L390 1219 aa10.31□□□□□ -0.76
VPS45-213ENST00000618148 SLC12A5Q9H2X9 1139 aa10.31□□□□□ -0.76
VPS45-213ENST00000618148 RBM33Q96EV2 1170 aaKnown RBP10.3□□□□□ -0.76
VPS45-213ENST00000618148 POLR3GLQ9BT43 218 aa10.3□□□□□ -0.76
VPS45-213ENST00000618148 PANK3Q9H999 370 aa10.3□□□□□ -0.76
VPS45-213ENST00000618148 A0A1W2PP64 1363 aa10.3□□□□□ -0.76
VPS45-213ENST00000618148 POLR3AO14802 1390 aaPredicted RBP10.3□□□□□ -0.76
VPS45-213ENST00000618148 MSH6P52701 1360 aa10.3□□□□□ -0.76
VPS45-213ENST00000618148 MST1RQ04912 1400 aa10.3□□□□□ -0.76
VPS45-213ENST00000618148 CARD14Q9BXL6 1004 aa10.29□□□□□ -0.76
VPS45-213ENST00000618148 C1orf167Q5SNV9 1468 aa10.29□□□□□ -0.76
VPS45-213ENST00000618148 MON2Q7Z3U7 1717 aa10.29□□□□□ -0.76
VPS45-213ENST00000618148 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
VPS45-213ENST00000618148 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 CABP1Q9NZU7 370 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 NRKQ7Z2Y5 1582 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 SSH2Q76I76 1423 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
VPS45-213ENST00000618148 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
VPS45-213ENST00000618148 RGPD8O14715 1765 aaPredicted RBP10.27□□□□□ -0.76
VPS45-213ENST00000618148 EDC4Q6P2E9 1401 aaKnown RBP10.27□□□□□ -0.77
VPS45-213ENST00000618148 NSD3Q9BZ95 1437 aa10.27□□□□□ -0.77
VPS45-213ENST00000618148 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.77
VPS45-213ENST00000618148 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
VPS45-213ENST00000618148 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
VPS45-213ENST00000618148 KIF1AQ12756 1690 aa10.27□□□□□ -0.77
VPS45-213ENST00000618148 IQSEC2Q5JU85 1478 aa10.26□□□□□ -0.77
VPS45-213ENST00000618148 BRD4O60885 1362 aaPredicted RBP10.26□□□□□ -0.77
VPS45-213ENST00000618148 USP6P35125 1406 aa10.26□□□□□ -0.77
VPS45-213ENST00000618148 NSD2O96028 1365 aa10.26□□□□□ -0.77
VPS45-213ENST00000618148 ATF3P18847 181 aa10.25□□□□□ -0.77
VPS45-213ENST00000618148 HDGFL2Q7Z4V5 671 aaPredicted RBP10.25□□□□□ -0.77
VPS45-213ENST00000618148 PARD3Q8TEW0 1356 aa10.25□□□□□ -0.77
VPS45-213ENST00000618148 ACEP12821 1306 aa10.25□□□□□ -0.77
VPS45-213ENST00000618148 KNSTRNQ9Y448 316 aa10.25□□□□□ -0.77
VPS45-213ENST00000618148 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
VPS45-213ENST00000618148 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
VPS45-213ENST00000618148 CGNL1Q0VF96 1302 aa10.23□□□□□ -0.77
VPS45-213ENST00000618148 NUTM2FA1L443 756 aa10.23□□□□□ -0.77
VPS45-213ENST00000618148 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
VPS45-213ENST00000618148 USP54Q70EL1 1684 aa10.23□□□□□ -0.77
VPS45-213ENST00000618148 ANKRD26Q9UPS8 1709 aa10.22□□□□□ -0.77
VPS45-213ENST00000618148 ANP32CO43423 234 aa10.22□□□□□ -0.77
VPS45-213ENST00000618148 RALBP1Q15311 655 aa10.22□□□□□ -0.77
VPS45-213ENST00000618148 ORAI2Q96SN7 254 aa10.22□□□□□ -0.77
VPS45-213ENST00000618148 TTC21AQ8NDW8 1320 aa10.21□□□□□ -0.77
VPS45-213ENST00000618148 KIF20BQ96Q89 1820 aa10.21□□□□□ -0.77
VPS45-213ENST00000618148 ESCO1Q5FWF5 840 aa10.21□□□□□ -0.78
VPS45-213ENST00000618148 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.78
VPS45-213ENST00000618148 SLAIN2Q9P270 581 aa10.21□□□□□ -0.78
VPS45-213ENST00000618148 TRPM3Q9HCF6 1732 aaPredicted RBP10.21□□□□□ -0.78
VPS45-213ENST00000618148 TTC21BQ7Z4L5 1316 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 FYB1O15117 783 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 MIER1Q8N108 512 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 NGDNQ8NEJ9 315 aaKnown RBP10.2□□□□□ -0.78
VPS45-213ENST00000618148 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 PXDNQ92626 1479 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 OVOS2A0A0J9YW53 1432 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 OVOS2Q6IE36 1432 aa10.2□□□□□ -0.78
VPS45-213ENST00000618148 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
VPS45-213ENST00000618148 PIK3C2AO00443 1686 aa10.19□□□□□ -0.78
VPS45-213ENST00000618148 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
VPS45-213ENST00000618148 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
VPS45-213ENST00000618148 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
VPS45-213ENST00000618148 SBNO1A3KN83 1393 aa10.18□□□□□ -0.78
VPS45-213ENST00000618148 CCER2I3L3R5 266 aa10.18□□□□□ -0.78
VPS45-213ENST00000618148 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
VPS45-213ENST00000618148 ALS2Q96Q42 1657 aa10.17□□□□□ -0.78
VPS45-213ENST00000618148 MARF1Q9Y4F3 1742 aaKnown RBP10.17□□□□□ -0.78
VPS45-213ENST00000618148 AHDC1Q5TGY3 1603 aaPredicted RBP10.17□□□□□ -0.78
VPS45-213ENST00000618148 POTEMA6NI47 508 aa10.17□□□□□ -0.78
VPS45-213ENST00000618148 FOXO3O43524 673 aa10.17□□□□□ -0.78
VPS45-213ENST00000618148 CC2D1BQ5T0F9 858 aaKnown RBP10.17□□□□□ -0.78
VPS45-213ENST00000618148 SOS2Q07890 1332 aaPredicted RBP10.17□□□□□ -0.78
VPS45-213ENST00000618148 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
VPS45-213ENST00000618148 NME9Q86XW9 330 aa10.16□□□□□ -0.78
VPS45-213ENST00000618148 ROBO1Q9Y6N7 1651 aa10.16□□□□□ -0.78
VPS45-213ENST00000618148 AATKQ6ZMQ8 1374 aa10.16□□□□□ -0.78
VPS45-213ENST00000618148 MED1Q15648 1581 aaPredicted RBP10.16□□□□□ -0.78
VPS45-213ENST00000618148 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.78
VPS45-213ENST00000618148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS45-213ENST00000618148 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.78
VPS45-213ENST00000618148 PSME1Q06323 249 aa10.15□□□□□ -0.79
VPS45-213ENST00000618148 NLRP13Q86W25 1043 aa10.15□□□□□ -0.79
VPS45-213ENST00000618148 CERKQ8TCT0 537 aa10.15□□□□□ -0.79
VPS45-213ENST00000618148 GGNBP2Q9H3C7 697 aa10.15□□□□□ -0.79
VPS45-213ENST00000618148 POTEB2H3BUK9 544 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms