RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 NRKQ7Z2Y5 1582 aa27.42■■□□□ 1.98
CNTNAP3B-212ENST00000617422 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
CNTNAP3B-212ENST00000617422 COL3A1P02461 1466 aaPredicted RBP27.4■■□□□ 1.98
CNTNAP3B-212ENST00000617422 FMN2Q9NZ56 1722 aa27.38■■□□□ 1.97
CNTNAP3B-212ENST00000617422 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
CNTNAP3B-212ENST00000617422 ZNF692Q9BU19 519 aaPredicted RBP27.38■■□□□ 1.97
CNTNAP3B-212ENST00000617422 PMFBP1Q8TBY8 1022 aa27.36■■□□□ 1.97
CNTNAP3B-212ENST00000617422 CFAP53Q96M91 514 aa27.36■■□□□ 1.97
CNTNAP3B-212ENST00000617422 USP6P35125 1406 aa27.36■■□□□ 1.97
CNTNAP3B-212ENST00000617422 APAF1O14727 1248 aa27.35■■□□□ 1.97
CNTNAP3B-212ENST00000617422 MAP2P11137 1827 aaKnown RBP27.34■■□□□ 1.97
CNTNAP3B-212ENST00000617422 TTC21BQ7Z4L5 1316 aa27.34■■□□□ 1.97
CNTNAP3B-212ENST00000617422 ZNF521Q96K83 1311 aa27.34■■□□□ 1.97
CNTNAP3B-212ENST00000617422 IRX6P78412 446 aaPredicted RBP27.33■■□□□ 1.97
CNTNAP3B-212ENST00000617422 SSH2Q76I76 1423 aa27.33■■□□□ 1.97
CNTNAP3B-212ENST00000617422 POLKQ9UBT6 870 aa27.33■■□□□ 1.97
CNTNAP3B-212ENST00000617422 PDE3BQ13370 1112 aa27.32■■□□□ 1.96
CNTNAP3B-212ENST00000617422 PNPLA6Q8IY17 1366 aa27.32■■□□□ 1.96
CNTNAP3B-212ENST00000617422 NWD1Q149M9 1564 aa27.32■■□□□ 1.96
CNTNAP3B-212ENST00000617422 ANKARQ7Z5J8 1434 aa27.31■■□□□ 1.96
CNTNAP3B-212ENST00000617422 HSPA2P54652 639 aa27.31■■□□□ 1.96
CNTNAP3B-212ENST00000617422 ADGRL3Q9HAR2 1447 aa27.28■■□□□ 1.96
CNTNAP3B-212ENST00000617422 COG3Q96JB2 828 aa27.28■■□□□ 1.96
CNTNAP3B-212ENST00000617422 EMILIN1Q9Y6C2 1016 aa27.28■■□□□ 1.96
CNTNAP3B-212ENST00000617422 IQSEC2Q5JU85 1478 aa27.26■■□□□ 1.95
CNTNAP3B-212ENST00000617422 OVOS2A0A0J9YW53 1432 aa27.25■■□□□ 1.95
CNTNAP3B-212ENST00000617422 OVOS2Q6IE36 1432 aa27.25■■□□□ 1.95
CNTNAP3B-212ENST00000617422 U2AF1L5P0DN76 240 aaPredicted RBP27.25■■□□□ 1.95
CNTNAP3B-212ENST00000617422 U2AF1Q01081 240 aaKnown RBP eCLIP27.25■■□□□ 1.95
CNTNAP3B-212ENST00000617422 NGDNQ8NEJ9 315 aaKnown RBP27.25■■□□□ 1.95
CNTNAP3B-212ENST00000617422 AATKQ6ZMQ8 1374 aa27.24■■□□□ 1.95
CNTNAP3B-212ENST00000617422 PPM1GO15355 546 aaPredicted RBP27.24■■□□□ 1.95
CNTNAP3B-212ENST00000617422 RUNDC1Q96C34 613 aa27.24■■□□□ 1.95
CNTNAP3B-212ENST00000617422 RRS1Q15050 365 aaKnown RBP27.23■■□□□ 1.95
CNTNAP3B-212ENST00000617422 RNF123Q5XPI4 1314 aa27.23■■□□□ 1.95
CNTNAP3B-212ENST00000617422 DMRT2Q9Y5R5 561 aa27.22■■□□□ 1.95
CNTNAP3B-212ENST00000617422 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
CNTNAP3B-212ENST00000617422 U2SURPO15042 1029 aaKnown RBP27.22■■□□□ 1.95
CNTNAP3B-212ENST00000617422 DIAPH1O60610 1272 aaKnown RBP27.21■■□□□ 1.95
CNTNAP3B-212ENST00000617422 SPINK5Q9NQ38 1064 aaPredicted RBP27.21■■□□□ 1.95
CNTNAP3B-212ENST00000617422 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
CNTNAP3B-212ENST00000617422 RRP7AQ9Y3A4 280 aaKnown RBP27.21■■□□□ 1.95
CNTNAP3B-212ENST00000617422 LMTK3Q96Q04 1460 aa27.2■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PIK3C2AO00443 1686 aa27.2■■□□□ 1.94
CNTNAP3B-212ENST00000617422 CDK12Q9NYV4 1490 aaPredicted RBP27.19■■□□□ 1.94
CNTNAP3B-212ENST00000617422 GOLGA2Q08379 1002 aa27.18■■□□□ 1.94
CNTNAP3B-212ENST00000617422 DUSP27Q5VZP5 1158 aa27.18■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PLEKHF1Q96S99 279 aa27.18■■□□□ 1.94
CNTNAP3B-212ENST00000617422 TTC21AQ8NDW8 1320 aa27.17■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PROSER2Q86WR7 435 aaPredicted RBP27.16■■□□□ 1.94
CNTNAP3B-212ENST00000617422 NEUROD2Q15784 382 aa27.16■■□□□ 1.94
CNTNAP3B-212ENST00000617422 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
CNTNAP3B-212ENST00000617422 ANP32EQ9BTT0 268 aa27.16■■□□□ 1.94
CNTNAP3B-212ENST00000617422 USP31Q70CQ4 1352 aa27.16■■□□□ 1.94
CNTNAP3B-212ENST00000617422 SLFN5Q08AF3 891 aa27.15■■□□□ 1.94
CNTNAP3B-212ENST00000617422 WWC1Q8IX03 1113 aa27.15■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PHF8Q9UPP1 1060 aa27.15■■□□□ 1.94
CNTNAP3B-212ENST00000617422 RCAN3Q9UKA8 241 aa27.15■■□□□ 1.94
CNTNAP3B-212ENST00000617422 TRMT2AQ8IZ69 625 aaKnown RBP27.14■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
CNTNAP3B-212ENST00000617422 MARF1Q9Y4F3 1742 aaKnown RBP27.14■■□□□ 1.94
CNTNAP3B-212ENST00000617422 PEAK1Q9H792 1746 aa27.14■■□□□ 1.93
CNTNAP3B-212ENST00000617422 STRCQ7RTU9 1775 aa27.13■■□□□ 1.93
CNTNAP3B-212ENST00000617422 IL13P35225 146 aa27.13■■□□□ 1.93
CNTNAP3B-212ENST00000617422 NGEFQ8N5V2 710 aa27.12■■□□□ 1.93
CNTNAP3B-212ENST00000617422 LRRC7Q96NW7 1537 aa27.11■■□□□ 1.93
CNTNAP3B-212ENST00000617422 SOX12O15370 315 aa27.1■■□□□ 1.93
CNTNAP3B-212ENST00000617422 ESCO1Q5FWF5 840 aa27.1■■□□□ 1.93
CNTNAP3B-212ENST00000617422 ORAI2Q96SN7 254 aa27.09■■□□□ 1.93
CNTNAP3B-212ENST00000617422 NUTM2GQ5VZR2 741 aa27.08■■□□□ 1.93
CNTNAP3B-212ENST00000617422 RSPH6AQ9H0K4 717 aa27.07■■□□□ 1.92
CNTNAP3B-212ENST00000617422 TMEM94Q12767 1356 aa27.07■■□□□ 1.92
CNTNAP3B-212ENST00000617422 USP54Q70EL1 1684 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 NLRP6P59044 892 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 ERICH6BQ5W0A0 696 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 HMOX1P09601 288 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 RRP1P56182 461 aaKnown RBP27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 CCDC27Q2M243 656 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 C19orf44Q9H6X5 657 aa27.05■■□□□ 1.92
CNTNAP3B-212ENST00000617422 PAK3O75914 559 aaPredicted RBP27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 FCHSD2O94868 740 aa27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 TMPOP42166 694 aaKnown RBP27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 RBM19Q9Y4C8 960 aaKnown RBP27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 MAP3K19Q56UN5 1328 aa27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 E9PSI1 815 aa27.04■■□□□ 1.92
CNTNAP3B-212ENST00000617422 PRKAR2BP31323 418 aa27.02■■□□□ 1.92
CNTNAP3B-212ENST00000617422 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
CNTNAP3B-212ENST00000617422 ABTB2Q8N961 1025 aa27.02■■□□□ 1.92
CNTNAP3B-212ENST00000617422 C1orf167Q5SNV9 1468 aa27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 EIF4A2Q14240 407 aaKnown RBP27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 TRIM35Q9UPQ4 493 aa27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 MAPK8IP3Q9UPT6 1336 aa27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 NCBP3Q53F19 620 aaKnown RBP27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 PHACTR3Q96KR7 559 aa27.01■■□□□ 1.91
CNTNAP3B-212ENST00000617422 FOXO3O43524 673 aa26.99■■□□□ 1.91
CNTNAP3B-212ENST00000617422 PSME1Q06323 249 aa26.99■■□□□ 1.91
CNTNAP3B-212ENST00000617422 XIRP1Q702N8 1843 aaKnown RBP26.99■■□□□ 1.91
CNTNAP3B-212ENST00000617422 XPCQ01831 940 aaPredicted RBP26.98■■□□□ 1.91
CNTNAP3B-212ENST00000617422 WDR63Q8IWG1 891 aa26.98■■□□□ 1.91
CNTNAP3B-212ENST00000617422 MST1RQ04912 1400 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms