RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM196AQ6ZSG2 479 aa26.19■■□□□ 1.78
TRAPPC3-209ENST00000616395 C14orf93Q9H972 538 aaKnown RBP26.19■■□□□ 1.78
TRAPPC3-209ENST00000616395 DHX57Q6P158 1386 aaKnown RBP26.18■■□□□ 1.78
TRAPPC3-209ENST00000616395 PARD3Q8TEW0 1356 aa26.18■■□□□ 1.78
TRAPPC3-209ENST00000616395 ALS2Q96Q42 1657 aa26.18■■□□□ 1.78
TRAPPC3-209ENST00000616395 CFAP70Q5T0N1 1121 aa26.16■■□□□ 1.78
TRAPPC3-209ENST00000616395 GPRASP1Q5JY77 1395 aa26.16■■□□□ 1.78
TRAPPC3-209ENST00000616395 SPATA31A1Q5TZJ5 1347 aa26.16■■□□□ 1.78
TRAPPC3-209ENST00000616395 PRDM11Q9NQV5 511 aa26.15■■□□□ 1.78
TRAPPC3-209ENST00000616395 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
TRAPPC3-209ENST00000616395 POGKQ9P215 609 aa26.14■■□□□ 1.77
TRAPPC3-209ENST00000616395 CRYBG1Q9Y4K1 1723 aa26.12■■□□□ 1.77
TRAPPC3-209ENST00000616395 PPP1R1BQ9UD71 204 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC3-209ENST00000616395 RREB1Q92766 1687 aa26.11■■□□□ 1.77
TRAPPC3-209ENST00000616395 NBPF8Q3BBV2 869 aa26.11■■□□□ 1.77
TRAPPC3-209ENST00000616395 NBPF14Q5TI25 921 aa26.11■■□□□ 1.77
TRAPPC3-209ENST00000616395 STRN4Q9NRL3 753 aa26.11■■□□□ 1.77
TRAPPC3-209ENST00000616395 HIRIP3Q9BW71 556 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC3-209ENST00000616395 NUP188Q5SRE5 1749 aa26.1■■□□□ 1.77
TRAPPC3-209ENST00000616395 PRR36Q9H6K5 1346 aa26.09■■□□□ 1.77
TRAPPC3-209ENST00000616395 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
TRAPPC3-209ENST00000616395 CHRNA2Q15822 529 aa26.09■■□□□ 1.77
TRAPPC3-209ENST00000616395 SPON1Q9HCB6 807 aa26.09■■□□□ 1.77
TRAPPC3-209ENST00000616395 KIAA0232Q92628 1395 aa26.08■■□□□ 1.77
TRAPPC3-209ENST00000616395 DLC1Q96QB1 1528 aa26.07■■□□□ 1.76
TRAPPC3-209ENST00000616395 DCAF8L1A6NGE4 600 aa26.07■■□□□ 1.76
TRAPPC3-209ENST00000616395 USP35Q9P2H5 1018 aa26.07■■□□□ 1.76
TRAPPC3-209ENST00000616395 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
TRAPPC3-209ENST00000616395 KCNQ2O43526 872 aa26.05■■□□□ 1.76
TRAPPC3-209ENST00000616395 PDE3BQ13370 1112 aa26.05■■□□□ 1.76
TRAPPC3-209ENST00000616395 NINLQ9Y2I6 1382 aa26.05■■□□□ 1.76
TRAPPC3-209ENST00000616395 NGDNQ8NEJ9 315 aaKnown RBP26.04■■□□□ 1.76
TRAPPC3-209ENST00000616395 MINK1Q8N4C8 1332 aaPredicted RBP26.03■■□□□ 1.76
TRAPPC3-209ENST00000616395 TULP4Q9NRJ4 1543 aa26.03■■□□□ 1.76
TRAPPC3-209ENST00000616395 EIF3AQ14152 1382 aaKnown RBP26.02■■□□□ 1.76
TRAPPC3-209ENST00000616395 ZC3H6P61129 1189 aaKnown RBP26.01■■□□□ 1.75
TRAPPC3-209ENST00000616395 BARGINQ6ZT62 677 aa26.01■■□□□ 1.75
TRAPPC3-209ENST00000616395 TRAK1Q9UPV9 953 aa26■■□□□ 1.75
TRAPPC3-209ENST00000616395 WASLO00401 505 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC3-209ENST00000616395 EVA1CP58658 441 aa25.98■■□□□ 1.75
TRAPPC3-209ENST00000616395 TRIM26Q12899 539 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC3-209ENST00000616395 SSH2Q76I76 1423 aa25.98■■□□□ 1.75
TRAPPC3-209ENST00000616395 CAMTA1Q9Y6Y1 1673 aa25.97■■□□□ 1.75
TRAPPC3-209ENST00000616395 PHRF1Q9P1Y6 1649 aaKnown RBP25.97■■□□□ 1.75
TRAPPC3-209ENST00000616395 ADGRB1O14514 1584 aa25.96■■□□□ 1.75
TRAPPC3-209ENST00000616395 NUTM2GQ5VZR2 741 aa25.95■■□□□ 1.75
TRAPPC3-209ENST00000616395 LARP1Q6PKG0 1096 aaKnown RBP25.94■■□□□ 1.74
TRAPPC3-209ENST00000616395 TCP11L2Q8N4U5 519 aa25.93■■□□□ 1.74
TRAPPC3-209ENST00000616395 ZNF784Q8NCA9 323 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC3-209ENST00000616395 ATP7BP35670 1465 aa25.9■■□□□ 1.74
TRAPPC3-209ENST00000616395 ANO8Q9HCE9 1232 aaPredicted RBP25.88■■□□□ 1.73
TRAPPC3-209ENST00000616395 NRKQ7Z2Y5 1582 aa25.87■■□□□ 1.73
TRAPPC3-209ENST00000616395 NUDT16Q96DE0 195 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-209ENST00000616395 THRAP3Q9Y2W1 955 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-209ENST00000616395 PDGFDQ9GZP0 370 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC3-209ENST00000616395 CASZ1Q86V15 1759 aa25.84■■□□□ 1.73
TRAPPC3-209ENST00000616395 LMO7Q8WWI1 1683 aa25.84■■□□□ 1.73
TRAPPC3-209ENST00000616395 ITSN1Q15811 1721 aa25.84■■□□□ 1.73
TRAPPC3-209ENST00000616395 CPDO75976 1380 aa25.83■■□□□ 1.73
TRAPPC3-209ENST00000616395 SENP3-EIF4A1A0A087X0R7 540 aa25.83■■□□□ 1.73
TRAPPC3-209ENST00000616395 C11orf95C9JLR9 678 aaPredicted RBP25.83■■□□□ 1.73
TRAPPC3-209ENST00000616395 PLSCR1O15162 318 aa25.83■■□□□ 1.73
TRAPPC3-209ENST00000616395 PARP4Q9UKK3 1724 aaKnown RBP25.83■■□□□ 1.72
TRAPPC3-209ENST00000616395 ZBTB7AO95365 584 aa25.82■■□□□ 1.72
TRAPPC3-209ENST00000616395 OVOS2A0A0G2JMS6 1433 aa25.81■■□□□ 1.72
TRAPPC3-209ENST00000616395 OVOS2A0A0J9YW53 1432 aa25.81■■□□□ 1.72
TRAPPC3-209ENST00000616395 OVOS2Q6IE36 1432 aa25.81■■□□□ 1.72
TRAPPC3-209ENST00000616395 PEAK1Q9H792 1746 aa25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 RGPD3A6NKT7 1758 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 RGPD4Q7Z3J3 1758 aa25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 PTGER2P43116 358 aa25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 ACEP12821 1306 aa25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 POLR3AO14802 1390 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC3-209ENST00000616395 MYOM1P52179 1685 aa25.79■■□□□ 1.72
TRAPPC3-209ENST00000616395 PTF1AQ7RTS3 328 aa25.79■■□□□ 1.72
TRAPPC3-209ENST00000616395 ABTB2Q8N961 1025 aa25.79■■□□□ 1.72
TRAPPC3-209ENST00000616395 BCL11BQ9C0K0 894 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC3-209ENST00000616395 KDM2AQ9Y2K7 1162 aa25.78■■□□□ 1.72
TRAPPC3-209ENST00000616395 USP19O94966 1318 aa25.78■■□□□ 1.72
TRAPPC3-209ENST00000616395 COL5A2P05997 1499 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC3-209ENST00000616395 ATF5Q9Y2D1 282 aaPredicted RBP25.77■■□□□ 1.72
TRAPPC3-209ENST00000616395 PROM2Q8N271 834 aa25.76■■□□□ 1.71
TRAPPC3-209ENST00000616395 CDK19Q9BWU1 502 aa25.76■■□□□ 1.71
TRAPPC3-209ENST00000616395 CRB1P82279 1406 aa25.75■■□□□ 1.71
TRAPPC3-209ENST00000616395 C1QTNF8P60827 252 aa25.75■■□□□ 1.71
TRAPPC3-209ENST00000616395 UTRNP46939 3433 aa25.74■■□□□ 1.71
TRAPPC3-209ENST00000616395 GCP02774 474 aa25.74■■□□□ 1.71
TRAPPC3-209ENST00000616395 FHDC1Q9C0D6 1143 aaPredicted RBP25.74■■□□□ 1.71
TRAPPC3-209ENST00000616395 SYT17Q9BSW7 474 aa25.73■■□□□ 1.71
TRAPPC3-209ENST00000616395 SBF2Q86WG5 1849 aa25.73■■□□□ 1.71
TRAPPC3-209ENST00000616395 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
TRAPPC3-209ENST00000616395 TOPAZ1Q8N9V7 1692 aa25.72■■□□□ 1.71
TRAPPC3-209ENST00000616395 LRRC37A3O60309 1634 aa25.72■■□□□ 1.71
TRAPPC3-209ENST00000616395 DDB1Q16531 1140 aa25.72■■□□□ 1.71
TRAPPC3-209ENST00000616395 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
TRAPPC3-209ENST00000616395 CCDC61Q9Y6R9 512 aa25.72■■□□□ 1.71
TRAPPC3-209ENST00000616395 PLEKHG3A1L390 1219 aa25.71■■□□□ 1.71
TRAPPC3-209ENST00000616395 NLRP13Q86W25 1043 aa25.7■■□□□ 1.71
TRAPPC3-209ENST00000616395 ZBTB7CA1YPR0 619 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms