RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 POLR3AO14802 1390 aaPredicted RBP29.8■■■□□ 2.36
PMPCA-207ENST00000612553 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
PMPCA-207ENST00000612553 CCDC9Q9Y3X0 531 aaKnown RBP29.8■■■□□ 2.36
PMPCA-207ENST00000612553 EP400Q96L91 3159 aa29.8■■■□□ 2.36
PMPCA-207ENST00000612553 CRYBG1Q9Y4K1 1723 aa29.79■■■□□ 2.36
PMPCA-207ENST00000612553 ACEP12821 1306 aa29.79■■■□□ 2.36
PMPCA-207ENST00000612553 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
PMPCA-207ENST00000612553 COL14A1Q05707 1796 aaKnown RBP29.79■■■□□ 2.36
PMPCA-207ENST00000612553 SRPK2P78362 688 aaKnown RBP29.77■■■□□ 2.36
PMPCA-207ENST00000612553 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
PMPCA-207ENST00000612553 BTG4Q9NY30 223 aa29.77■■■□□ 2.36
PMPCA-207ENST00000612553 QRICH2Q9H0J4 1663 aa29.76■■■□□ 2.36
PMPCA-207ENST00000612553 TRPM1Q7Z4N2 1603 aa29.76■■■□□ 2.35
PMPCA-207ENST00000612553 NRAPQ86VF7 1730 aa29.76■■■□□ 2.35
PMPCA-207ENST00000612553 CCDC125Q86Z20 511 aa29.75■■■□□ 2.35
PMPCA-207ENST00000612553 ONECUT3O60422 494 aaPredicted RBP29.74■■■□□ 2.35
PMPCA-207ENST00000612553 SEPT12Q8IYM1 358 aa29.74■■■□□ 2.35
PMPCA-207ENST00000612553 BRWD3Q6RI45 1802 aa29.73■■■□□ 2.35
PMPCA-207ENST00000612553 CABP2Q9NPB3 220 aa29.72■■■□□ 2.35
PMPCA-207ENST00000612553 PPIP5K1Q6PFW1 1433 aa29.71■■■□□ 2.35
PMPCA-207ENST00000612553 PRDM11Q9NQV5 511 aa29.71■■■□□ 2.35
PMPCA-207ENST00000612553 PHRF1Q9P1Y6 1649 aaKnown RBP29.7■■■□□ 2.34
PMPCA-207ENST00000612553 ROCK2O75116 1388 aaKnown RBP29.68■■■□□ 2.34
PMPCA-207ENST00000612553 NUTM2GQ5VZR2 741 aa29.68■■■□□ 2.34
PMPCA-207ENST00000612553 ABTB2Q8N961 1025 aa29.67■■■□□ 2.34
PMPCA-207ENST00000612553 KIAA0232Q92628 1395 aa29.66■■■□□ 2.34
PMPCA-207ENST00000612553 A0A0G2JS52 829 aa29.64■■■□□ 2.34
PMPCA-207ENST00000612553 MYT1Q01538 1121 aa29.64■■■□□ 2.34
PMPCA-207ENST00000612553 FAM98CQ17RN3 349 aaKnown RBP29.64■■■□□ 2.34
PMPCA-207ENST00000612553 KRT27Q7Z3Y8 459 aa29.64■■■□□ 2.34
PMPCA-207ENST00000612553 EVC2Q86UK5 1308 aa29.64■■■□□ 2.34
PMPCA-207ENST00000612553 ZC3H6P61129 1189 aaKnown RBP29.63■■■□□ 2.33
PMPCA-207ENST00000612553 BRD4O60885 1362 aaPredicted RBP29.63■■■□□ 2.33
PMPCA-207ENST00000612553 BLMP54132 1417 aaPredicted RBP29.62■■■□□ 2.33
PMPCA-207ENST00000612553 CABP1Q9NZU7 370 aa29.62■■■□□ 2.33
PMPCA-207ENST00000612553 SPATA31A5Q5VU36 1347 aa29.62■■■□□ 2.33
PMPCA-207ENST00000612553 SPATA31A7Q8IWB4 1347 aa29.62■■■□□ 2.33
PMPCA-207ENST00000612553 CHRNA2Q15822 529 aa29.61■■■□□ 2.33
PMPCA-207ENST00000612553 NLRP13Q86W25 1043 aa29.59■■■□□ 2.33
PMPCA-207ENST00000612553 NRKQ7Z2Y5 1582 aa29.59■■■□□ 2.33
PMPCA-207ENST00000612553 USP19O94966 1318 aa29.58■■■□□ 2.33
PMPCA-207ENST00000612553 USP6P35125 1406 aa29.56■■■□□ 2.32
PMPCA-207ENST00000612553 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
PMPCA-207ENST00000612553 STRN4Q9NRL3 753 aa29.55■■■□□ 2.32
PMPCA-207ENST00000612553 CPDO75976 1380 aa29.54■■■□□ 2.32
PMPCA-207ENST00000612553 ZRANB1Q9UGI0 708 aa29.54■■■□□ 2.32
PMPCA-207ENST00000612553 SPATA31A1Q5TZJ5 1347 aa29.53■■■□□ 2.32
PMPCA-207ENST00000612553 GCP02774 474 aa29.53■■■□□ 2.32
PMPCA-207ENST00000612553 TONSLQ96HA7 1378 aa29.52■■■□□ 2.32
PMPCA-207ENST00000612553 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
PMPCA-207ENST00000612553 THSD7AQ9UPZ6 1657 aa29.52■■■□□ 2.32
PMPCA-207ENST00000612553 EVA1CP58658 441 aa29.51■■■□□ 2.31
PMPCA-207ENST00000612553 CARD11Q9BXL7 1154 aa29.5■■■□□ 2.31
PMPCA-207ENST00000612553 SSH2Q76I76 1423 aa29.49■■■□□ 2.31
PMPCA-207ENST00000612553 NLRP6P59044 892 aa29.49■■■□□ 2.31
PMPCA-207ENST00000612553 ZNF692Q9BU19 519 aaPredicted RBP29.49■■■□□ 2.31
PMPCA-207ENST00000612553 CAMTA1Q9Y6Y1 1673 aa29.49■■■□□ 2.31
PMPCA-207ENST00000612553 LMO7Q8WWI1 1683 aa29.48■■■□□ 2.31
PMPCA-207ENST00000612553 DEFB132Q7Z7B7 95 aa29.48■■■□□ 2.31
PMPCA-207ENST00000612553 SBNO2Q9Y2G9 1366 aa29.47■■■□□ 2.31
PMPCA-207ENST00000612553 AKAP12Q02952 1782 aa29.45■■■□□ 2.31
PMPCA-207ENST00000612553 USP35Q9P2H5 1018 aa29.45■■■□□ 2.31
PMPCA-207ENST00000612553 PIK3C2AO00443 1686 aa29.44■■■□□ 2.3
PMPCA-207ENST00000612553 SLIT3O75094 1523 aa29.44■■■□□ 2.3
PMPCA-207ENST00000612553 LARP1Q6PKG0 1096 aaKnown RBP29.43■■■□□ 2.3
PMPCA-207ENST00000612553 FAM182BQ5T319 152 aa29.42■■■□□ 2.3
PMPCA-207ENST00000612553 BARGINQ6ZT62 677 aa29.42■■■□□ 2.3
PMPCA-207ENST00000612553 TTC21BQ7Z4L5 1316 aa29.42■■■□□ 2.3
PMPCA-207ENST00000612553 CPSF1Q10570 1443 aaKnown RBP29.4■■■□□ 2.3
PMPCA-207ENST00000612553 BAG6P46379 1132 aa29.4■■■□□ 2.3
PMPCA-207ENST00000612553 RGPD1P0DJD0 1748 aa29.4■■■□□ 2.3
PMPCA-207ENST00000612553 ZBTB7CA1YPR0 619 aa29.39■■■□□ 2.3
PMPCA-207ENST00000612553 COL5A2P05997 1499 aaPredicted RBP29.39■■■□□ 2.3
PMPCA-207ENST00000612553 TTC21AQ8NDW8 1320 aa29.39■■■□□ 2.3
PMPCA-207ENST00000612553 AATKQ6ZMQ8 1374 aa29.39■■■□□ 2.29
PMPCA-207ENST00000612553 KTN1Q86UP2 1357 aaKnown RBP29.39■■■□□ 2.29
PMPCA-207ENST00000612553 TCP11L2Q8N4U5 519 aa29.38■■■□□ 2.29
PMPCA-207ENST00000612553 THRAP3Q9Y2W1 955 aaKnown RBP29.37■■■□□ 2.29
PMPCA-207ENST00000612553 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
PMPCA-207ENST00000612553 KCNH5Q8NCM2 988 aa29.35■■■□□ 2.29
PMPCA-207ENST00000612553 FAM196AQ6ZSG2 479 aa29.34■■■□□ 2.29
PMPCA-207ENST00000612553 MON2Q7Z3U7 1717 aa29.34■■■□□ 2.29
PMPCA-207ENST00000612553 PDE3BQ13370 1112 aa29.33■■■□□ 2.29
PMPCA-207ENST00000612553 CRB1P82279 1406 aa29.33■■■□□ 2.29
PMPCA-207ENST00000612553 COL18A1P39060 1754 aa29.31■■■□□ 2.28
PMPCA-207ENST00000612553 ARHGEF25Q86VW2 580 aa29.3■■■□□ 2.28
PMPCA-207ENST00000612553 TMC1Q8TDI8 760 aa29.3■■■□□ 2.28
PMPCA-207ENST00000612553 TNS1Q9HBL0 1735 aaKnown RBP29.3■■■□□ 2.28
PMPCA-207ENST00000612553 EN1Q05925 392 aaPredicted RBP29.29■■■□□ 2.28
PMPCA-207ENST00000612553 PUS7Q96PZ0 661 aaKnown RBP29.28■■■□□ 2.28
PMPCA-207ENST00000612553 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
PMPCA-207ENST00000612553 DISP2A7MBM2 1401 aa29.28■■■□□ 2.28
PMPCA-207ENST00000612553 SOX12O15370 315 aa29.27■■■□□ 2.28
PMPCA-207ENST00000612553 HDGFL2Q7Z4V5 671 aaPredicted RBP29.27■■■□□ 2.28
PMPCA-207ENST00000612553 AXIN2Q9Y2T1 843 aa29.27■■■□□ 2.28
PMPCA-207ENST00000612553 PARP4Q9UKK3 1724 aaKnown RBP29.27■■■□□ 2.28
PMPCA-207ENST00000612553 TRIM37O94972 964 aa29.26■■■□□ 2.27
PMPCA-207ENST00000612553 TOM1L2Q6ZVM7 507 aa29.26■■■□□ 2.27
PMPCA-207ENST00000612553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.26■■■□□ 2.27
PMPCA-207ENST00000612553 SLC12A5Q9H2X9 1139 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms