RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
CLK4-215ENST00000611733 NUTM2GQ5VZR2 741 aa16.54■□□□□ 0.24
CLK4-215ENST00000611733 FYB1O15117 783 aa16.54■□□□□ 0.24
CLK4-215ENST00000611733 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
CLK4-215ENST00000611733 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
CLK4-215ENST00000611733 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
CLK4-215ENST00000611733 PXDNQ92626 1479 aa16.53■□□□□ 0.24
CLK4-215ENST00000611733 SOS2Q07890 1332 aaPredicted RBP16.53■□□□□ 0.24
CLK4-215ENST00000611733 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
CLK4-215ENST00000611733 PLEKHG5O94827 1062 aa16.52■□□□□ 0.24
CLK4-215ENST00000611733 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
CLK4-215ENST00000611733 LMOD2Q6P5Q4 547 aa16.51■□□□□ 0.23
CLK4-215ENST00000611733 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
CLK4-215ENST00000611733 NRKQ7Z2Y5 1582 aa16.5■□□□□ 0.23
CLK4-215ENST00000611733 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
CLK4-215ENST00000611733 NHSL1Q5SYE7 1610 aa16.49■□□□□ 0.23
CLK4-215ENST00000611733 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
CLK4-215ENST00000611733 TRPM3Q9HCF6 1732 aaPredicted RBP16.49■□□□□ 0.23
CLK4-215ENST00000611733 FBLN1P23142 703 aa16.48■□□□□ 0.23
CLK4-215ENST00000611733 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
CLK4-215ENST00000611733 NLRP6P59044 892 aa16.48■□□□□ 0.23
CLK4-215ENST00000611733 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
CLK4-215ENST00000611733 AHDC1Q5TGY3 1603 aaPredicted RBP16.47■□□□□ 0.23
CLK4-215ENST00000611733 HSPA1LP34931 641 aa16.47■□□□□ 0.23
CLK4-215ENST00000611733 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
CLK4-215ENST00000611733 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
CLK4-215ENST00000611733 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
CLK4-215ENST00000611733 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
CLK4-215ENST00000611733 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
CLK4-215ENST00000611733 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
CLK4-215ENST00000611733 SOX12O15370 315 aa16.44■□□□□ 0.22
CLK4-215ENST00000611733 PHLPP1O60346 1717 aa16.44■□□□□ 0.22
CLK4-215ENST00000611733 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
CLK4-215ENST00000611733 COG3Q96JB2 828 aa16.44■□□□□ 0.22
CLK4-215ENST00000611733 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
CLK4-215ENST00000611733 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
CLK4-215ENST00000611733 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
CLK4-215ENST00000611733 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
CLK4-215ENST00000611733 COL16A1Q07092 1604 aaPredicted RBP16.42■□□□□ 0.22
CLK4-215ENST00000611733 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
CLK4-215ENST00000611733 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
CLK4-215ENST00000611733 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
CLK4-215ENST00000611733 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
CLK4-215ENST00000611733 ANP32CO43423 234 aa16.41■□□□□ 0.22
CLK4-215ENST00000611733 NSD2O96028 1365 aa16.4■□□□□ 0.22
CLK4-215ENST00000611733 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CLK4-215ENST00000611733 FBXO41Q8TF61 875 aa16.4■□□□□ 0.22
CLK4-215ENST00000611733 MARF1Q9Y4F3 1742 aaKnown RBP16.4■□□□□ 0.22
CLK4-215ENST00000611733 ARHGEF10O15013 1369 aa16.39■□□□□ 0.21
CLK4-215ENST00000611733 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
CLK4-215ENST00000611733 PARD3Q8TEW0 1356 aa16.39■□□□□ 0.21
CLK4-215ENST00000611733 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
CLK4-215ENST00000611733 USP19O94966 1318 aa16.39■□□□□ 0.21
CLK4-215ENST00000611733 GCP02774 474 aa16.38■□□□□ 0.21
CLK4-215ENST00000611733 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
CLK4-215ENST00000611733 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
CLK4-215ENST00000611733 RALBP1Q15311 655 aa16.37■□□□□ 0.21
CLK4-215ENST00000611733 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
CLK4-215ENST00000611733 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
CLK4-215ENST00000611733 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
CLK4-215ENST00000611733 EMILIN1Q9Y6C2 1016 aa16.36■□□□□ 0.21
CLK4-215ENST00000611733 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
CLK4-215ENST00000611733 ZBTB7CA1YPR0 619 aa16.34■□□□□ 0.21
CLK4-215ENST00000611733 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
CLK4-215ENST00000611733 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
CLK4-215ENST00000611733 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
CLK4-215ENST00000611733 SLIT3O75094 1523 aa16.34■□□□□ 0.21
CLK4-215ENST00000611733 JCADQ9P266 1359 aa16.33■□□□□ 0.21
CLK4-215ENST00000611733 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
CLK4-215ENST00000611733 MTHFSP49914 203 aa16.33■□□□□ 0.2
CLK4-215ENST00000611733 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
CLK4-215ENST00000611733 USP54Q70EL1 1684 aa16.33■□□□□ 0.2
CLK4-215ENST00000611733 MAP3K19Q56UN5 1328 aa16.33■□□□□ 0.2
CLK4-215ENST00000611733 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
CLK4-215ENST00000611733 NFAT5O94916 1531 aa16.32■□□□□ 0.2
CLK4-215ENST00000611733 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
CLK4-215ENST00000611733 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
CLK4-215ENST00000611733 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
CLK4-215ENST00000611733 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
CLK4-215ENST00000611733 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
CLK4-215ENST00000611733 PHRF1Q9P1Y6 1649 aaKnown RBP16.31■□□□□ 0.2
CLK4-215ENST00000611733 ADAMTS2O95450 1211 aa16.3■□□□□ 0.2
CLK4-215ENST00000611733 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
CLK4-215ENST00000611733 COL22A1Q8NFW1 1626 aaPredicted RBP16.3■□□□□ 0.2
CLK4-215ENST00000611733 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
CLK4-215ENST00000611733 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
CLK4-215ENST00000611733 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
CLK4-215ENST00000611733 AMPHP49418 695 aa16.28■□□□□ 0.2
CLK4-215ENST00000611733 ABCA3Q99758 1704 aa16.28■□□□□ 0.2
CLK4-215ENST00000611733 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
CLK4-215ENST00000611733 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
CLK4-215ENST00000611733 HOXC9P31274 260 aa16.27■□□□□ 0.19
CLK4-215ENST00000611733 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.19
CLK4-215ENST00000611733 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
CLK4-215ENST00000611733 IP6K1Q92551 441 aa16.26■□□□□ 0.19
CLK4-215ENST00000611733 LRP6O75581 1613 aa16.25■□□□□ 0.19
CLK4-215ENST00000611733 CPDO75976 1380 aa16.25■□□□□ 0.19
CLK4-215ENST00000611733 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
CLK4-215ENST00000611733 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
CLK4-215ENST00000611733 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms