RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 CPSF1Q10570 1443 aaKnown RBP30.87■■■□□ 2.53
HOXA4-204ENST00000610970 BCAR3O75815 825 aa30.87■■■□□ 2.53
HOXA4-204ENST00000610970 CDC42BPGQ6DT37 1551 aa30.86■■■□□ 2.53
HOXA4-204ENST00000610970 NEUROD2Q15784 382 aa30.86■■■□□ 2.53
HOXA4-204ENST00000610970 RRP7AQ9Y3A4 280 aaKnown RBP30.86■■■□□ 2.53
HOXA4-204ENST00000610970 EDC4Q6P2E9 1401 aaKnown RBP30.86■■■□□ 2.53
HOXA4-204ENST00000610970 CT47B1P0C2W7 299 aaPredicted RBP30.85■■■□□ 2.53
HOXA4-204ENST00000610970 AAMPQ13685 434 aa30.85■■■□□ 2.53
HOXA4-204ENST00000610970 PLEKHF1Q96S99 279 aa30.85■■■□□ 2.53
HOXA4-204ENST00000610970 DIAPH1O60610 1272 aaKnown RBP30.84■■■□□ 2.53
HOXA4-204ENST00000610970 ANP32AP39687 249 aaKnown RBP30.84■■■□□ 2.53
HOXA4-204ENST00000610970 ERICH6Q7L0X2 663 aa30.82■■■□□ 2.52
HOXA4-204ENST00000610970 PPIP5K1Q6PFW1 1433 aa30.81■■■□□ 2.52
HOXA4-204ENST00000610970 MAPK8IP3Q9UPT6 1336 aa30.81■■■□□ 2.52
HOXA4-204ENST00000610970 IL16Q14005 1332 aa30.8■■■□□ 2.52
HOXA4-204ENST00000610970 U2SURPO15042 1029 aaKnown RBP30.8■■■□□ 2.52
HOXA4-204ENST00000610970 RARSP54136 660 aaKnown RBP30.8■■■□□ 2.52
HOXA4-204ENST00000610970 PDE4AP27815 886 aa30.79■■■□□ 2.52
HOXA4-204ENST00000610970 PLEKHG1Q9ULL1 1385 aa30.79■■■□□ 2.52
HOXA4-204ENST00000610970 BACH2Q9BYV9 841 aa30.78■■■□□ 2.52
HOXA4-204ENST00000610970 C3P01024 1663 aa30.78■■■□□ 2.52
HOXA4-204ENST00000610970 TMPOP42166 694 aaKnown RBP30.78■■■□□ 2.52
HOXA4-204ENST00000610970 TXNDC2Q86VQ3 553 aa30.78■■■□□ 2.52
HOXA4-204ENST00000610970 CEBPAP49715 358 aaPredicted RBP30.77■■■□□ 2.52
HOXA4-204ENST00000610970 RIMS1Q86UR5 1692 aaKnown RBP30.77■■■□□ 2.52
HOXA4-204ENST00000610970 MON2Q7Z3U7 1717 aa30.77■■■□□ 2.52
HOXA4-204ENST00000610970 CANXP27824 592 aaKnown RBP30.76■■■□□ 2.52
HOXA4-204ENST00000610970 CCDC61Q9Y6R9 512 aa30.76■■■□□ 2.52
HOXA4-204ENST00000610970 FCHSD2O94868 740 aa30.76■■■□□ 2.51
HOXA4-204ENST00000610970 NUDT16Q96DE0 195 aaKnown RBP30.76■■■□□ 2.51
HOXA4-204ENST00000610970 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
HOXA4-204ENST00000610970 ZNF692Q9BU19 519 aaPredicted RBP30.75■■■□□ 2.51
HOXA4-204ENST00000610970 AATKQ6ZMQ8 1374 aa30.75■■■□□ 2.51
HOXA4-204ENST00000610970 AKAP12Q02952 1782 aa30.75■■■□□ 2.51
HOXA4-204ENST00000610970 ITSN1Q15811 1721 aa30.72■■■□□ 2.51
HOXA4-204ENST00000610970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.72■■■□□ 2.51
HOXA4-204ENST00000610970 IPO9Q96P70 1041 aaKnown RBP30.72■■■□□ 2.51
HOXA4-204ENST00000610970 POLKQ9UBT6 870 aa30.72■■■□□ 2.51
HOXA4-204ENST00000610970 MAP2P11137 1827 aaKnown RBP30.7■■■□□ 2.5
HOXA4-204ENST00000610970 TRIM35Q9UPQ4 493 aa30.7■■■□□ 2.5
HOXA4-204ENST00000610970 CDK12Q9NYV4 1490 aaPredicted RBP30.69■■■□□ 2.5
HOXA4-204ENST00000610970 SLIT1O75093 1534 aa30.68■■■□□ 2.5
HOXA4-204ENST00000610970 NEFMP07197 916 aa30.67■■■□□ 2.5
HOXA4-204ENST00000610970 NOP58Q9Y2X3 529 aaKnown RBP30.67■■■□□ 2.5
HOXA4-204ENST00000610970 PLPPR3Q6T4P5 718 aa30.67■■■□□ 2.5
HOXA4-204ENST00000610970 CLUAP1Q96AJ1 413 aa30.67■■■□□ 2.5
HOXA4-204ENST00000610970 EID1Q9Y6B2 187 aa30.66■■■□□ 2.5
HOXA4-204ENST00000610970 ARHGAP23Q9P227 1491 aa30.65■■■□□ 2.5
HOXA4-204ENST00000610970 ROBO2Q9HCK4 1378 aa30.65■■■□□ 2.5
HOXA4-204ENST00000610970 RIPK4P57078 832 aa30.64■■■□□ 2.5
HOXA4-204ENST00000610970 COG3Q96JB2 828 aa30.64■■■□□ 2.5
HOXA4-204ENST00000610970 LRRC7Q96NW7 1537 aa30.63■■■□□ 2.49
HOXA4-204ENST00000610970 FRAT1Q92837 279 aaPredicted RBP30.63■■■□□ 2.49
HOXA4-204ENST00000610970 RSPH6AQ9H0K4 717 aa30.62■■■□□ 2.49
HOXA4-204ENST00000610970 TOPAZ1Q8N9V7 1692 aa30.62■■■□□ 2.49
HOXA4-204ENST00000610970 PANK1Q8TE04 598 aa30.61■■■□□ 2.49
HOXA4-204ENST00000610970 LTKP29376 864 aa30.61■■■□□ 2.49
HOXA4-204ENST00000610970 COG6Q9Y2V7 657 aa30.61■■■□□ 2.49
HOXA4-204ENST00000610970 NME9Q86XW9 330 aa30.6■■■□□ 2.49
HOXA4-204ENST00000610970 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.6■■■□□ 2.49
HOXA4-204ENST00000610970 DIP2AQ14689 1571 aa30.59■■■□□ 2.49
HOXA4-204ENST00000610970 PMFBP1Q8TBY8 1022 aa30.59■■■□□ 2.49
HOXA4-204ENST00000610970 PLEKHG3A1L390 1219 aa30.58■■■□□ 2.49
HOXA4-204ENST00000610970 CALD1Q05682 793 aaKnown RBP30.58■■■□□ 2.49
HOXA4-204ENST00000610970 ZKSCAN2Q63HK3 967 aa30.58■■■□□ 2.49
HOXA4-204ENST00000610970 TBX22Q9Y458 520 aa30.58■■■□□ 2.49
HOXA4-204ENST00000610970 PRR36Q9H6K5 1346 aa30.58■■■□□ 2.49
HOXA4-204ENST00000610970 IL13P35225 146 aa30.56■■■□□ 2.48
HOXA4-204ENST00000610970 ZBTB47Q9UFB7 747 aaPredicted RBP30.56■■■□□ 2.48
HOXA4-204ENST00000610970 PRKAR2BP31323 418 aa30.56■■■□□ 2.48
HOXA4-204ENST00000610970 EXOSC9Q06265 439 aaKnown RBP30.56■■■□□ 2.48
HOXA4-204ENST00000610970 NRKQ7Z2Y5 1582 aa30.55■■■□□ 2.48
HOXA4-204ENST00000610970 PPM1GO15355 546 aaPredicted RBP30.55■■■□□ 2.48
HOXA4-204ENST00000610970 FAM161AQ3B820 660 aa30.55■■■□□ 2.48
HOXA4-204ENST00000610970 ZNF428Q96B54 188 aa30.55■■■□□ 2.48
HOXA4-204ENST00000610970 NFE2L2Q16236 605 aa30.54■■■□□ 2.48
HOXA4-204ENST00000610970 PTCH1Q13635 1447 aa30.53■■■□□ 2.48
HOXA4-204ENST00000610970 THEMISQ8N1K5 641 aaPredicted RBP30.53■■■□□ 2.48
HOXA4-204ENST00000610970 TSR2Q969E8 191 aaKnown RBP30.53■■■□□ 2.48
HOXA4-204ENST00000610970 IGHDP01880 384 aa30.52■■■□□ 2.48
HOXA4-204ENST00000610970 EMILIN1Q9Y6C2 1016 aa30.52■■■□□ 2.48
HOXA4-204ENST00000610970 PTPRUQ92729 1446 aa30.51■■■□□ 2.47
HOXA4-204ENST00000610970 MVPQ14764 893 aaKnown RBP30.5■■■□□ 2.47
HOXA4-204ENST00000610970 ALDH1L2Q3SY69 923 aa30.5■■■□□ 2.47
HOXA4-204ENST00000610970 DZIP1LQ8IYY4 767 aaKnown RBP30.5■■■□□ 2.47
HOXA4-204ENST00000610970 TTC21BQ7Z4L5 1316 aa30.49■■■□□ 2.47
HOXA4-204ENST00000610970 RLBP1P12271 317 aa30.49■■■□□ 2.47
HOXA4-204ENST00000610970 SMC4Q9NTJ3 1288 aa30.49■■■□□ 2.47
HOXA4-204ENST00000610970 LMOD3Q0VAK6 560 aa30.48■■■□□ 2.47
HOXA4-204ENST00000610970 BCL2L13Q9BXK5 485 aa30.48■■■□□ 2.47
HOXA4-204ENST00000610970 NCKAP5LQ9HCH0 1330 aa30.48■■■□□ 2.47
HOXA4-204ENST00000610970 SKAP1Q86WV1 359 aa30.47■■■□□ 2.47
HOXA4-204ENST00000610970 DDRGK1Q96HY6 314 aa30.47■■■□□ 2.47
HOXA4-204ENST00000610970 ACEP12821 1306 aa30.46■■■□□ 2.47
HOXA4-204ENST00000610970 USP6P35125 1406 aa30.46■■■□□ 2.47
HOXA4-204ENST00000610970 FBLN1P23142 703 aa30.46■■■□□ 2.47
HOXA4-204ENST00000610970 FTSJ3Q8IY81 847 aaKnown RBP30.46■■■□□ 2.47
HOXA4-204ENST00000610970 RWDD1Q9H446 243 aaPredicted RBP30.46■■■□□ 2.47
HOXA4-204ENST00000610970 ZRANB1Q9UGI0 708 aa30.46■■■□□ 2.47
HOXA4-204ENST00000610970 KIF16BQ96L93 1317 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms