RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 QRICH2Q9H0J4 1663 aa27.39■■□□□ 1.98
TCF3-219ENST00000610756 PPIP5K1Q6PFW1 1433 aa27.39■■□□□ 1.97
TCF3-219ENST00000610756 UNC5CLQ8IV45 518 aa27.38■■□□□ 1.97
TCF3-219ENST00000610756 SBNO2Q9Y2G9 1366 aa27.37■■□□□ 1.97
TCF3-219ENST00000610756 ATRNO75882 1429 aa27.36■■□□□ 1.97
TCF3-219ENST00000610756 TOPAZ1Q8N9V7 1692 aa27.36■■□□□ 1.97
TCF3-219ENST00000610756 FAM83GA6ND36 823 aa27.36■■□□□ 1.97
TCF3-219ENST00000610756 SLIT2O94813 1529 aa27.35■■□□□ 1.97
TCF3-219ENST00000610756 ALS2Q96Q42 1657 aa27.34■■□□□ 1.97
TCF3-219ENST00000610756 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.97
TCF3-219ENST00000610756 BRD4O60885 1362 aaPredicted RBP27.33■■□□□ 1.97
TCF3-219ENST00000610756 GJD4Q96KN9 370 aaPredicted RBP27.33■■□□□ 1.97
TCF3-219ENST00000610756 ABTB2Q8N961 1025 aa27.32■■□□□ 1.96
TCF3-219ENST00000610756 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
TCF3-219ENST00000610756 NUTM2GQ5VZR2 741 aa27.28■■□□□ 1.96
TCF3-219ENST00000610756 ATAD2Q6PL18 1390 aa27.28■■□□□ 1.96
TCF3-219ENST00000610756 SLC24A1O60721 1099 aa27.27■■□□□ 1.96
TCF3-219ENST00000610756 VPS72Q15906 364 aa27.27■■□□□ 1.96
TCF3-219ENST00000610756 RGS12O14924 1447 aa27.27■■□□□ 1.96
TCF3-219ENST00000610756 NLRP13Q86W25 1043 aa27.26■■□□□ 1.95
TCF3-219ENST00000610756 PUS7Q96PZ0 661 aaKnown RBP27.26■■□□□ 1.95
TCF3-219ENST00000610756 ST20-MTHFSA0A0A6YYL1 179 aa27.25■■□□□ 1.95
TCF3-219ENST00000610756 USP6P35125 1406 aa27.25■■□□□ 1.95
TCF3-219ENST00000610756 BTG4Q9NY30 223 aa27.24■■□□□ 1.95
TCF3-219ENST00000610756 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
TCF3-219ENST00000610756 TESK2Q96S53 571 aa27.23■■□□□ 1.95
TCF3-219ENST00000610756 PRDM11Q9NQV5 511 aa27.23■■□□□ 1.95
TCF3-219ENST00000610756 SSH2Q76I76 1423 aa27.22■■□□□ 1.95
TCF3-219ENST00000610756 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
TCF3-219ENST00000610756 UPF1Q92900 1129 aaKnown RBP eCLIP27.22■■□□□ 1.95
TCF3-219ENST00000610756 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.2■■□□□ 1.95
TCF3-219ENST00000610756 USP19O94966 1318 aa27.2■■□□□ 1.95
TCF3-219ENST00000610756 CPSF1Q10570 1443 aaKnown RBP27.2■■□□□ 1.94
TCF3-219ENST00000610756 KIAA0232Q92628 1395 aa27.2■■□□□ 1.94
TCF3-219ENST00000610756 GCP02774 474 aa27.19■■□□□ 1.94
TCF3-219ENST00000610756 ZC3H6P61129 1189 aaKnown RBP27.19■■□□□ 1.94
TCF3-219ENST00000610756 ONECUT3O60422 494 aaPredicted RBP27.18■■□□□ 1.94
TCF3-219ENST00000610756 NLRP6P59044 892 aa27.18■■□□□ 1.94
TCF3-219ENST00000610756 CRYBG1Q9Y4K1 1723 aa27.18■■□□□ 1.94
TCF3-219ENST00000610756 CCDC9Q9Y3X0 531 aaKnown RBP27.17■■□□□ 1.94
TCF3-219ENST00000610756 NWD2Q9ULI1 1742 aa27.17■■□□□ 1.94
TCF3-219ENST00000610756 TTC21BQ7Z4L5 1316 aa27.17■■□□□ 1.94
TCF3-219ENST00000610756 CHRNA2Q15822 529 aa27.16■■□□□ 1.94
TCF3-219ENST00000610756 COL14A1Q05707 1796 aaKnown RBP27.15■■□□□ 1.94
TCF3-219ENST00000610756 TMC1Q8TDI8 760 aa27.15■■□□□ 1.94
TCF3-219ENST00000610756 SLC12A5Q9H2X9 1139 aa27.15■■□□□ 1.94
TCF3-219ENST00000610756 CPDO75976 1380 aa27.14■■□□□ 1.94
TCF3-219ENST00000610756 KTN1Q86UP2 1357 aaKnown RBP27.14■■□□□ 1.94
TCF3-219ENST00000610756 TTC21AQ8NDW8 1320 aa27.14■■□□□ 1.94
TCF3-219ENST00000610756 PLCH1Q4KWH8 1693 aa27.14■■□□□ 1.93
TCF3-219ENST00000610756 USP47Q96K76 1375 aa27.13■■□□□ 1.93
TCF3-219ENST00000610756 GLI3P10071 1580 aa27.12■■□□□ 1.93
TCF3-219ENST00000610756 HDGFL2Q7Z4V5 671 aaPredicted RBP27.11■■□□□ 1.93
TCF3-219ENST00000610756 SEPT12Q8IYM1 358 aa27.11■■□□□ 1.93
TCF3-219ENST00000610756 TERF2IPQ9NYB0 399 aa27.1■■□□□ 1.93
TCF3-219ENST00000610756 PHRF1Q9P1Y6 1649 aaKnown RBP27.1■■□□□ 1.93
TCF3-219ENST00000610756 SPATA31A5Q5VU36 1347 aa27.09■■□□□ 1.93
TCF3-219ENST00000610756 SPATA31A7Q8IWB4 1347 aa27.09■■□□□ 1.93
TCF3-219ENST00000610756 TMF1P82094 1093 aa27.08■■□□□ 1.93
TCF3-219ENST00000610756 CD163L1Q9NR16 1453 aa27.07■■□□□ 1.92
TCF3-219ENST00000610756 EVA1CP58658 441 aa27.07■■□□□ 1.92
TCF3-219ENST00000610756 KCNH5Q8NCM2 988 aa27.06■■□□□ 1.92
TCF3-219ENST00000610756 STRN4Q9NRL3 753 aa27.06■■□□□ 1.92
TCF3-219ENST00000610756 NINLQ9Y2I6 1382 aa27.05■■□□□ 1.92
TCF3-219ENST00000610756 NRKQ7Z2Y5 1582 aa27.05■■□□□ 1.92
TCF3-219ENST00000610756 FAM98CQ17RN3 349 aaKnown RBP27.05■■□□□ 1.92
TCF3-219ENST00000610756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.05■■□□□ 1.92
TCF3-219ENST00000610756 NRAPQ86VF7 1730 aa27.05■■□□□ 1.92
TCF3-219ENST00000610756 AKAP12Q02952 1782 aa27.04■■□□□ 1.92
TCF3-219ENST00000610756 SLIT3O75094 1523 aa27.03■■□□□ 1.92
TCF3-219ENST00000610756 SPATA31A1Q5TZJ5 1347 aa27.03■■□□□ 1.92
TCF3-219ENST00000610756 CDCA8Q53HL2 280 aa27.02■■□□□ 1.92
TCF3-219ENST00000610756 PIK3C2AO00443 1686 aa27.01■■□□□ 1.91
TCF3-219ENST00000610756 ARHGEF25Q86VW2 580 aa27.01■■□□□ 1.91
TCF3-219ENST00000610756 AATKQ6ZMQ8 1374 aa27.01■■□□□ 1.91
TCF3-219ENST00000610756 USP31Q70CQ4 1352 aa27.01■■□□□ 1.91
TCF3-219ENST00000610756 CAMTA1Q9Y6Y1 1673 aa27.01■■□□□ 1.91
TCF3-219ENST00000610756 KRT27Q7Z3Y8 459 aa27■■□□□ 1.91
TCF3-219ENST00000610756 CCDC125Q86Z20 511 aa27■■□□□ 1.91
TCF3-219ENST00000610756 A0A1W2PP64 1363 aa27■■□□□ 1.91
TCF3-219ENST00000610756 EDC4Q6P2E9 1401 aaKnown RBP27■■□□□ 1.91
TCF3-219ENST00000610756 ZRANB1Q9UGI0 708 aa26.99■■□□□ 1.91
TCF3-219ENST00000610756 EP400Q96L91 3159 aa26.99■■□□□ 1.91
TCF3-219ENST00000610756 LARP1Q6PKG0 1096 aaKnown RBP26.98■■□□□ 1.91
TCF3-219ENST00000610756 NME9Q86XW9 330 aa26.98■■□□□ 1.91
TCF3-219ENST00000610756 A0A0G2JS52 829 aa26.97■■□□□ 1.91
TCF3-219ENST00000610756 MYT1Q01538 1121 aa26.97■■□□□ 1.91
TCF3-219ENST00000610756 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
TCF3-219ENST00000610756 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
TCF3-219ENST00000610756 BARGINQ6ZT62 677 aa26.95■■□□□ 1.91
TCF3-219ENST00000610756 AXIN2Q9Y2T1 843 aa26.95■■□□□ 1.91
TCF3-219ENST00000610756 LMO7Q8WWI1 1683 aa26.95■■□□□ 1.9
TCF3-219ENST00000610756 SOX12O15370 315 aa26.94■■□□□ 1.9
TCF3-219ENST00000610756 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
TCF3-219ENST00000610756 THRAP3Q9Y2W1 955 aaKnown RBP26.93■■□□□ 1.9
TCF3-219ENST00000610756 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
TCF3-219ENST00000610756 TCP11L2Q8N4U5 519 aa26.92■■□□□ 1.9
TCF3-219ENST00000610756 ANKRD36BQ8N2N9 1353 aa26.92■■□□□ 1.9
TCF3-219ENST00000610756 EIF4G2P78344 907 aaKnown RBP eCLIP26.9■■□□□ 1.9
TCF3-219ENST00000610756 CRB1P82279 1406 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms