RNA–Protein interactions for RNA: ENST00000610738.5

COLCA2-204, Transcript of colorectal cancer associated 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLCA2, Length 975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-204ENST00000610738 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
COLCA2-204ENST00000610738 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
COLCA2-204ENST00000610738 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
COLCA2-204ENST00000610738 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
COLCA2-204ENST00000610738 QRICH2Q9H0J4 1663 aa23.55■■□□□ 1.36
COLCA2-204ENST00000610738 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
COLCA2-204ENST00000610738 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
COLCA2-204ENST00000610738 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
COLCA2-204ENST00000610738 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
COLCA2-204ENST00000610738 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
COLCA2-204ENST00000610738 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
COLCA2-204ENST00000610738 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
COLCA2-204ENST00000610738 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
COLCA2-204ENST00000610738 CHRNA2Q15822 529 aa23.52■■□□□ 1.36
COLCA2-204ENST00000610738 VPS72Q15906 364 aa23.52■■□□□ 1.36
COLCA2-204ENST00000610738 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
COLCA2-204ENST00000610738 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
COLCA2-204ENST00000610738 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
COLCA2-204ENST00000610738 CABP1Q9NZU7 370 aa23.49■■□□□ 1.35
COLCA2-204ENST00000610738 KIAA0232Q92628 1395 aa23.49■■□□□ 1.35
COLCA2-204ENST00000610738 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
COLCA2-204ENST00000610738 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
COLCA2-204ENST00000610738 NWD2Q9ULI1 1742 aa23.47■■□□□ 1.35
COLCA2-204ENST00000610738 EP400Q96L91 3159 aa23.46■■□□□ 1.35
COLCA2-204ENST00000610738 PHRF1Q9P1Y6 1649 aaKnown RBP23.45■■□□□ 1.34
COLCA2-204ENST00000610738 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
COLCA2-204ENST00000610738 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
COLCA2-204ENST00000610738 COL14A1Q05707 1796 aaKnown RBP23.44■■□□□ 1.34
COLCA2-204ENST00000610738 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
COLCA2-204ENST00000610738 A0A0G2JS52 829 aa23.42■■□□□ 1.34
COLCA2-204ENST00000610738 MYT1Q01538 1121 aa23.42■■□□□ 1.34
COLCA2-204ENST00000610738 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
COLCA2-204ENST00000610738 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
COLCA2-204ENST00000610738 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
COLCA2-204ENST00000610738 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
COLCA2-204ENST00000610738 USP6P35125 1406 aa23.41■■□□□ 1.34
COLCA2-204ENST00000610738 USP19O94966 1318 aa23.4■■□□□ 1.34
COLCA2-204ENST00000610738 FAM182BQ5T319 152 aa23.4■■□□□ 1.34
COLCA2-204ENST00000610738 CCDC125Q86Z20 511 aa23.4■■□□□ 1.34
COLCA2-204ENST00000610738 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
COLCA2-204ENST00000610738 SPATA31A5Q5VU36 1347 aa23.39■■□□□ 1.34
COLCA2-204ENST00000610738 SPATA31A7Q8IWB4 1347 aa23.39■■□□□ 1.34
COLCA2-204ENST00000610738 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
COLCA2-204ENST00000610738 SSH2Q76I76 1423 aa23.36■■□□□ 1.33
COLCA2-204ENST00000610738 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
COLCA2-204ENST00000610738 KRT27Q7Z3Y8 459 aa23.35■■□□□ 1.33
COLCA2-204ENST00000610738 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
COLCA2-204ENST00000610738 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
COLCA2-204ENST00000610738 GCP02774 474 aa23.34■■□□□ 1.33
COLCA2-204ENST00000610738 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
COLCA2-204ENST00000610738 NLRP6P59044 892 aa23.33■■□□□ 1.33
COLCA2-204ENST00000610738 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
COLCA2-204ENST00000610738 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
COLCA2-204ENST00000610738 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
COLCA2-204ENST00000610738 PIK3C2AO00443 1686 aa23.32■■□□□ 1.32
COLCA2-204ENST00000610738 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
COLCA2-204ENST00000610738 TTC21BQ7Z4L5 1316 aa23.31■■□□□ 1.32
COLCA2-204ENST00000610738 SOX12O15370 315 aa23.3■■□□□ 1.32
COLCA2-204ENST00000610738 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
COLCA2-204ENST00000610738 CPDO75976 1380 aa23.29■■□□□ 1.32
COLCA2-204ENST00000610738 LMO7Q8WWI1 1683 aa23.29■■□□□ 1.32
COLCA2-204ENST00000610738 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
COLCA2-204ENST00000610738 CPSF1Q10570 1443 aaKnown RBP23.28■■□□□ 1.32
COLCA2-204ENST00000610738 SLIT3O75094 1523 aa23.28■■□□□ 1.32
COLCA2-204ENST00000610738 EVA1CP58658 441 aa23.27■■□□□ 1.32
COLCA2-204ENST00000610738 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
COLCA2-204ENST00000610738 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
COLCA2-204ENST00000610738 SRCAPQ6ZRS2 3230 aa23.25■■□□□ 1.31
COLCA2-204ENST00000610738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
COLCA2-204ENST00000610738 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
COLCA2-204ENST00000610738 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
COLCA2-204ENST00000610738 KTN1Q86UP2 1357 aaKnown RBP23.25■■□□□ 1.31
COLCA2-204ENST00000610738 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
COLCA2-204ENST00000610738 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
COLCA2-204ENST00000610738 AKAP12Q02952 1782 aa23.23■■□□□ 1.31
COLCA2-204ENST00000610738 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
COLCA2-204ENST00000610738 TESK2Q96S53 571 aa23.23■■□□□ 1.31
COLCA2-204ENST00000610738 AXIN2Q9Y2T1 843 aa23.23■■□□□ 1.31
COLCA2-204ENST00000610738 NME9Q86XW9 330 aa23.22■■□□□ 1.31
COLCA2-204ENST00000610738 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
COLCA2-204ENST00000610738 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
COLCA2-204ENST00000610738 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
COLCA2-204ENST00000610738 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
COLCA2-204ENST00000610738 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
COLCA2-204ENST00000610738 TTC21AQ8NDW8 1320 aa23.17■■□□□ 1.3
COLCA2-204ENST00000610738 BARGINQ6ZT62 677 aa23.17■■□□□ 1.3
COLCA2-204ENST00000610738 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
COLCA2-204ENST00000610738 NFAT5O94916 1531 aa23.17■■□□□ 1.3
COLCA2-204ENST00000610738 COL18A1P39060 1754 aa23.17■■□□□ 1.3
COLCA2-204ENST00000610738 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
COLCA2-204ENST00000610738 A0A1W2PP64 1363 aa23.16■■□□□ 1.3
COLCA2-204ENST00000610738 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
COLCA2-204ENST00000610738 TRIM37O94972 964 aa23.14■■□□□ 1.29
COLCA2-204ENST00000610738 CRB1P82279 1406 aa23.14■■□□□ 1.29
COLCA2-204ENST00000610738 USP47Q96K76 1375 aa23.13■■□□□ 1.29
COLCA2-204ENST00000610738 TOM1L2Q6ZVM7 507 aa23.12■■□□□ 1.29
COLCA2-204ENST00000610738 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
COLCA2-204ENST00000610738 BAG6P46379 1132 aa23.1■■□□□ 1.29
COLCA2-204ENST00000610738 KCNH5Q8NCM2 988 aa23.1■■□□□ 1.29
COLCA2-204ENST00000610738 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms