RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 TOPAZ1Q8N9V7 1692 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 SRPK2P78362 688 aaKnown RBP24.91■■□□□ 1.58
PRKN-208ENST00000610470 GLI3P10071 1580 aa24.91■■□□□ 1.58
PRKN-208ENST00000610470 ACEP12821 1306 aa24.9■■□□□ 1.58
PRKN-208ENST00000610470 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.58
PRKN-208ENST00000610470 CCDC9Q9Y3X0 531 aaKnown RBP24.89■■□□□ 1.58
PRKN-208ENST00000610470 TRPM1Q7Z4N2 1603 aa24.88■■□□□ 1.57
PRKN-208ENST00000610470 ROCK2O75116 1388 aaKnown RBP24.87■■□□□ 1.57
PRKN-208ENST00000610470 QRICH2Q9H0J4 1663 aa24.87■■□□□ 1.57
PRKN-208ENST00000610470 CABP2Q9NPB3 220 aa24.86■■□□□ 1.57
PRKN-208ENST00000610470 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
PRKN-208ENST00000610470 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
PRKN-208ENST00000610470 PPIP5K1Q6PFW1 1433 aa24.85■■□□□ 1.57
PRKN-208ENST00000610470 CRYBG1Q9Y4K1 1723 aa24.84■■□□□ 1.57
PRKN-208ENST00000610470 PRDM11Q9NQV5 511 aa24.83■■□□□ 1.57
PRKN-208ENST00000610470 SEPT12Q8IYM1 358 aa24.82■■□□□ 1.56
PRKN-208ENST00000610470 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
PRKN-208ENST00000610470 NRAPQ86VF7 1730 aa24.81■■□□□ 1.56
PRKN-208ENST00000610470 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
PRKN-208ENST00000610470 CCDC125Q86Z20 511 aa24.81■■□□□ 1.56
PRKN-208ENST00000610470 TRIM26Q12899 539 aaPredicted RBP24.8■■□□□ 1.56
PRKN-208ENST00000610470 NUTM2GQ5VZR2 741 aa24.8■■□□□ 1.56
PRKN-208ENST00000610470 ABTB2Q8N961 1025 aa24.8■■□□□ 1.56
PRKN-208ENST00000610470 EP400Q96L91 3159 aa24.79■■□□□ 1.56
PRKN-208ENST00000610470 BRD4O60885 1362 aaPredicted RBP24.79■■□□□ 1.56
PRKN-208ENST00000610470 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
PRKN-208ENST00000610470 PHRF1Q9P1Y6 1649 aaKnown RBP24.79■■□□□ 1.56
PRKN-208ENST00000610470 CABP1Q9NZU7 370 aa24.77■■□□□ 1.56
PRKN-208ENST00000610470 TONSLQ96HA7 1378 aa24.77■■□□□ 1.56
PRKN-208ENST00000610470 A0A0G2JS52 829 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 ZC3H6P61129 1189 aaKnown RBP24.75■■□□□ 1.55
PRKN-208ENST00000610470 MYT1Q01538 1121 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 BRWD3Q6RI45 1802 aa24.75■■□□□ 1.55
PRKN-208ENST00000610470 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
PRKN-208ENST00000610470 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 SPATA31A5Q5VU36 1347 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 SPATA31A7Q8IWB4 1347 aa24.74■■□□□ 1.55
PRKN-208ENST00000610470 USP19O94966 1318 aa24.73■■□□□ 1.55
PRKN-208ENST00000610470 CHRNA2Q15822 529 aa24.73■■□□□ 1.55
PRKN-208ENST00000610470 USP6P35125 1406 aa24.72■■□□□ 1.55
PRKN-208ENST00000610470 BLMP54132 1417 aaPredicted RBP24.71■■□□□ 1.55
PRKN-208ENST00000610470 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
PRKN-208ENST00000610470 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
PRKN-208ENST00000610470 CPDO75976 1380 aa24.69■■□□□ 1.54
PRKN-208ENST00000610470 STRN4Q9NRL3 753 aa24.69■■□□□ 1.54
PRKN-208ENST00000610470 GCP02774 474 aa24.68■■□□□ 1.54
PRKN-208ENST00000610470 ZNF692Q9BU19 519 aaPredicted RBP24.68■■□□□ 1.54
PRKN-208ENST00000610470 SBNO2Q9Y2G9 1366 aa24.67■■□□□ 1.54
PRKN-208ENST00000610470 EVA1CP58658 441 aa24.67■■□□□ 1.54
PRKN-208ENST00000610470 SF3B2Q13435 895 aaKnown RBP24.67■■□□□ 1.54
PRKN-208ENST00000610470 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
PRKN-208ENST00000610470 NLRP6P59044 892 aa24.66■■□□□ 1.54
PRKN-208ENST00000610470 SSH2Q76I76 1423 aa24.65■■□□□ 1.54
PRKN-208ENST00000610470 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
PRKN-208ENST00000610470 SLIT3O75094 1523 aa24.61■■□□□ 1.53
PRKN-208ENST00000610470 TTC21BQ7Z4L5 1316 aa24.61■■□□□ 1.53
PRKN-208ENST00000610470 LMO7Q8WWI1 1683 aa24.6■■□□□ 1.53
PRKN-208ENST00000610470 USP35Q9P2H5 1018 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 CPSF1Q10570 1443 aaKnown RBP24.59■■□□□ 1.53
PRKN-208ENST00000610470 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
PRKN-208ENST00000610470 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
PRKN-208ENST00000610470 BARGINQ6ZT62 677 aa24.58■■□□□ 1.53
PRKN-208ENST00000610470 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
PRKN-208ENST00000610470 KTN1Q86UP2 1357 aaKnown RBP24.57■■□□□ 1.52
PRKN-208ENST00000610470 ZBTB7CA1YPR0 619 aa24.57■■□□□ 1.52
PRKN-208ENST00000610470 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
PRKN-208ENST00000610470 AATKQ6ZMQ8 1374 aa24.55■■□□□ 1.52
PRKN-208ENST00000610470 KCNH5Q8NCM2 988 aa24.55■■□□□ 1.52
PRKN-208ENST00000610470 THRAP3Q9Y2W1 955 aaKnown RBP24.55■■□□□ 1.52
PRKN-208ENST00000610470 COL5A2P05997 1499 aaPredicted RBP24.55■■□□□ 1.52
PRKN-208ENST00000610470 BAG6P46379 1132 aa24.54■■□□□ 1.52
PRKN-208ENST00000610470 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
PRKN-208ENST00000610470 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
PRKN-208ENST00000610470 PUS7Q96PZ0 661 aaKnown RBP24.52■■□□□ 1.52
PRKN-208ENST00000610470 HDGFL2Q7Z4V5 671 aaPredicted RBP24.51■■□□□ 1.51
PRKN-208ENST00000610470 CRB1P82279 1406 aa24.51■■□□□ 1.51
PRKN-208ENST00000610470 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 SLC24A1O60721 1099 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 FAM196AQ6ZSG2 479 aa24.5■■□□□ 1.51
PRKN-208ENST00000610470 RGPD1P0DJD0 1748 aa24.49■■□□□ 1.51
PRKN-208ENST00000610470 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
PRKN-208ENST00000610470 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
PRKN-208ENST00000610470 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 SOX12O15370 315 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.47■■□□□ 1.51
PRKN-208ENST00000610470 SLC12A5Q9H2X9 1139 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 TERF2IPQ9NYB0 399 aa24.47■■□□□ 1.51
PRKN-208ENST00000610470 TOM1L2Q6ZVM7 507 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 TESK2Q96S53 571 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 COL18A1P39060 1754 aa24.46■■□□□ 1.51
PRKN-208ENST00000610470 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
PRKN-208ENST00000610470 AXIN2Q9Y2T1 843 aa24.45■■□□□ 1.5
PRKN-208ENST00000610470 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms