RNA–Protein interactions for RNA: ENST00000608682.1

AP004247.3-201, humanhuman

BASIC

Gene AP004247.3, Length 624 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.3-201ENST00000608682 CTHP32929 405 aa7.66□□□□□ -1.18
AP004247.3-201ENST00000608682 FKBPLQ9UIM3 349 aa7.66□□□□□ -1.18
AP004247.3-201ENST00000608682 MAFBQ9Y5Q3 323 aaPredicted RBP7.66□□□□□ -1.18
AP004247.3-201ENST00000608682 ZBBXA8MT70 800 aa7.65□□□□□ -1.18
AP004247.3-201ENST00000608682 HRO43593 1189 aa7.65□□□□□ -1.18
AP004247.3-201ENST00000608682 TSR3Q9UJK0 312 aaKnown RBP7.65□□□□□ -1.18
AP004247.3-201ENST00000608682 JUNDP17535 347 aa7.64□□□□□ -1.19
AP004247.3-201ENST00000608682 WNT2BQ93097 391 aa7.64□□□□□ -1.19
AP004247.3-201ENST00000608682 THAP11Q96EK4 314 aa7.64□□□□□ -1.19
AP004247.3-201ENST00000608682 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
AP004247.3-201ENST00000608682 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
AP004247.3-201ENST00000608682 PIK3CDO00329 1044 aa7.63□□□□□ -1.19
AP004247.3-201ENST00000608682 ATP9BO43861 1147 aa7.63□□□□□ -1.19
AP004247.3-201ENST00000608682 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
AP004247.3-201ENST00000608682 TMCO4Q5TGY1 634 aa7.63□□□□□ -1.19
AP004247.3-201ENST00000608682 POTEGQ6S5H5 508 aa7.63□□□□□ -1.19
AP004247.3-201ENST00000608682 PTPRNQ16849 979 aa7.62□□□□□ -1.19
AP004247.3-201ENST00000608682 POTEMA6NI47 508 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 ATG7O95352 703 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 BRD1O95696 1058 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 COPS2P61201 443 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 WBP1LQ9NX94 342 aa7.61□□□□□ -1.19
AP004247.3-201ENST00000608682 SKIP12755 728 aa7.6□□□□□ -1.19
AP004247.3-201ENST00000608682 CCNYL3P0C7X3 344 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 KCNA1Q09470 495 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 CDAN1Q8IWY9 1227 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 DEPDC4Q8N2C3 294 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 FAM160A2Q8N612 972 aaPredicted RBP7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 SPSB2Q99619 263 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 PRDM9Q9NQV7 894 aa7.59□□□□□ -1.19
AP004247.3-201ENST00000608682 ZC3H4Q9UPT8 1303 aaKnown RBP7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 KANK4Q5T7N3 995 aaPredicted RBP7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 NUDT12Q9BQG2 462 aa7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 PCDHB9Q9Y5E1 797 aa7.58□□□□□ -1.2
AP004247.3-201ENST00000608682 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 DXOO77932 396 aaKnown RBP7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 MFAP1P55081 439 aaKnown RBP7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 PTK2Q05397 1052 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 MSS51Q4VC12 460 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 EVA1BQ9NVM1 165 aa7.57□□□□□ -1.2
AP004247.3-201ENST00000608682 USP17L5A8MUK1 530 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 TLL1O43897 1013 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 NFATC2IPQ8NCF5 419 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 PCDH10Q9P2E7 1040 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
AP004247.3-201ENST00000608682 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
AP004247.3-201ENST00000608682 CCDC24Q8N4L8 307 aa7.55□□□□□ -1.2
AP004247.3-201ENST00000608682 STK32AQ8WU08 396 aa7.55□□□□□ -1.2
AP004247.3-201ENST00000608682 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
AP004247.3-201ENST00000608682 IVNS1ABPQ9Y6Y0 642 aa7.55□□□□□ -1.2
AP004247.3-201ENST00000608682 MMP16P51512 607 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 GPSM3Q9Y4H4 160 aa7.54□□□□□ -1.2
AP004247.3-201ENST00000608682 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 RGS22Q8NE09 1264 aa7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 ADAM32Q8TC27 787 aa7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 ARHGAP9Q9BRR9 750 aa7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 ZMIZ1Q9ULJ6 1067 aa7.53□□□□□ -1.2
AP004247.3-201ENST00000608682 NCOA4Q13772 614 aa7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 FOXD4L5Q5VV16 416 aaPredicted RBP7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 PTCRAQ6ISU1 281 aaPredicted RBP7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 ZBTB33Q86T24 672 aa7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 FOXD4L4Q8WXT5 416 aaPredicted RBP7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 GPKOWQ92917 476 aaPredicted RBP eCLIP7.52□□□□□ -1.21
AP004247.3-201ENST00000608682 ZPR1O75312 459 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 ADH1BP00325 375 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 RASA1P20936 1047 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 LARP1Q6PKG0 1096 aaKnown RBP7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 PLPP7Q8NBV4 271 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 CARD14Q9BXL6 1004 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
AP004247.3-201ENST00000608682 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L10C9JJH3 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L12C9JPN9 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L21D6R901 530 aa7.5□□□□□ -1.21
AP004247.3-201ENST00000608682 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms