RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
LSM1P2-201ENST00000604911 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
LSM1P2-201ENST00000604911 LYPD8Q6UX82 237 aa9.15□□□□□ -0.94
LSM1P2-201ENST00000604911 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
LSM1P2-201ENST00000604911 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
LSM1P2-201ENST00000604911 SPTLC1O15269 473 aa9.14□□□□□ -0.95
LSM1P2-201ENST00000604911 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
LSM1P2-201ENST00000604911 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 BMP1P13497 986 aa9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 HOMEZQ8IX15 550 aa9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 TLL2Q9Y6L7 1015 aa9.13□□□□□ -0.95
LSM1P2-201ENST00000604911 F12P00748 615 aaPredicted RBP9.12□□□□□ -0.95
LSM1P2-201ENST00000604911 HRCP23327 699 aa9.12□□□□□ -0.95
LSM1P2-201ENST00000604911 PRPF38BQ5VTL8 546 aaKnown RBP9.11□□□□□ -0.95
LSM1P2-201ENST00000604911 FAM9AQ8IZU1 332 aaPredicted RBP9.11□□□□□ -0.95
LSM1P2-201ENST00000604911 AK7Q96M32 723 aa9.11□□□□□ -0.95
LSM1P2-201ENST00000604911 ZBTB3Q9H5J0 574 aa9.1□□□□□ -0.95
LSM1P2-201ENST00000604911 PLEKHG3A1L390 1219 aa9.09□□□□□ -0.95
LSM1P2-201ENST00000604911 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
LSM1P2-201ENST00000604911 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
LSM1P2-201ENST00000604911 NNTQ13423 1086 aa9.08□□□□□ -0.96
LSM1P2-201ENST00000604911 KLF16Q9BXK1 252 aaPredicted RBP9.08□□□□□ -0.96
LSM1P2-201ENST00000604911 MAP10Q9P2G4 905 aa9.08□□□□□ -0.96
LSM1P2-201ENST00000604911 NXF1Q9UBU9 619 aaKnown RBP9.08□□□□□ -0.96
LSM1P2-201ENST00000604911 CTHP32929 405 aa9.07□□□□□ -0.96
LSM1P2-201ENST00000604911 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
LSM1P2-201ENST00000604911 CDK15Q96Q40 435 aa9.07□□□□□ -0.96
LSM1P2-201ENST00000604911 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
LSM1P2-201ENST00000604911 TIMP2P16035 220 aa9.06□□□□□ -0.96
LSM1P2-201ENST00000604911 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
LSM1P2-201ENST00000604911 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
LSM1P2-201ENST00000604911 ZFP42Q96MM3 310 aa9.06□□□□□ -0.96
LSM1P2-201ENST00000604911 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
LSM1P2-201ENST00000604911 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 ADH1CP00326 375 aa9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 FAM174AQ8TBP5 190 aa9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 FOXJ1Q92949 421 aa9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 LIMD1Q9UGP4 676 aa9.05□□□□□ -0.96
LSM1P2-201ENST00000604911 PDE4DQ08499 809 aa9.04□□□□□ -0.96
LSM1P2-201ENST00000604911 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
LSM1P2-201ENST00000604911 QPCTQ16769 361 aa9.03□□□□□ -0.96
LSM1P2-201ENST00000604911 H3BM21 787 aa9.02□□□□□ -0.97
LSM1P2-201ENST00000604911 LILRB3O75022 631 aa9.02□□□□□ -0.97
LSM1P2-201ENST00000604911 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
LSM1P2-201ENST00000604911 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
LSM1P2-201ENST00000604911 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
LSM1P2-201ENST00000604911 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
LSM1P2-201ENST00000604911 CENPBP07199 599 aaPredicted RBP9□□□□□ -0.97
LSM1P2-201ENST00000604911 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
LSM1P2-201ENST00000604911 GRM5P41594 1212 aa9□□□□□ -0.97
LSM1P2-201ENST00000604911 NR3C2P08235 984 aa8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 GMPRP36959 345 aa8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 NR5A1Q13285 461 aa8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 BPHLQ86WA6 291 aaPredicted RBP8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 C1QTNF2Q9BXJ5 285 aa8.99□□□□□ -0.97
LSM1P2-201ENST00000604911 VEGFBP49765 207 aa8.98□□□□□ -0.97
LSM1P2-201ENST00000604911 UBE2Q2Q8WVN8 375 aa8.98□□□□□ -0.97
LSM1P2-201ENST00000604911 IRF7Q92985 503 aa8.98□□□□□ -0.97
LSM1P2-201ENST00000604911 PURBQ96QR8 312 aaKnown RBP8.98□□□□□ -0.97
LSM1P2-201ENST00000604911 ERBB4Q15303 1308 aa8.98□□□□□ -0.97
LSM1P2-201ENST00000604911 SCARF1Q14162 830 aa8.97□□□□□ -0.97
LSM1P2-201ENST00000604911 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
LSM1P2-201ENST00000604911 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
LSM1P2-201ENST00000604911 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
LSM1P2-201ENST00000604911 NUTM2BA6NNL0 878 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 NUTM2EB1AL46 878 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 ZIC2O95409 532 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 ARID5BQ14865 1188 aa8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 RTL5Q5HYW3 569 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 NUTM2DQ5VT03 806 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 NUTM2AQ8IVF1 878 aaPredicted RBP8.96□□□□□ -0.98
LSM1P2-201ENST00000604911 SH3BP5LQ7L8J4 393 aa8.95□□□□□ -0.98
LSM1P2-201ENST00000604911 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
LSM1P2-201ENST00000604911 TSC1Q92574 1164 aa8.95□□□□□ -0.98
LSM1P2-201ENST00000604911 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
LSM1P2-201ENST00000604911 AGERQ15109 404 aa8.94□□□□□ -0.98
LSM1P2-201ENST00000604911 TRMT44Q8IYL2 757 aaKnown RBP8.94□□□□□ -0.98
LSM1P2-201ENST00000604911 PODXL2Q9NZ53 605 aa8.94□□□□□ -0.98
LSM1P2-201ENST00000604911 MAP4K5Q9Y4K4 846 aa8.94□□□□□ -0.98
LSM1P2-201ENST00000604911 SOBPA7XYQ1 873 aa8.93□□□□□ -0.98
LSM1P2-201ENST00000604911 VSIG8P0DPA2 414 aa8.93□□□□□ -0.98
LSM1P2-201ENST00000604911 NBPF14Q5TI25 921 aa8.93□□□□□ -0.98
LSM1P2-201ENST00000604911 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
LSM1P2-201ENST00000604911 MEIOBQ8N635 442 aa8.92□□□□□ -0.98
LSM1P2-201ENST00000604911 ZSCAN1Q8NBB4 408 aa8.91□□□□□ -0.98
LSM1P2-201ENST00000604911 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
LSM1P2-201ENST00000604911 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.98
LSM1P2-201ENST00000604911 FSHRP23945 695 aa8.89□□□□□ -0.99
LSM1P2-201ENST00000604911 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
LSM1P2-201ENST00000604911 POLR3EQ9NVU0 708 aa8.89□□□□□ -0.99
LSM1P2-201ENST00000604911 CTDSPL2Q05D32 466 aa8.88□□□□□ -0.99
LSM1P2-201ENST00000604911 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
LSM1P2-201ENST00000604911 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
LSM1P2-201ENST00000604911 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
LSM1P2-201ENST00000604911 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
LSM1P2-201ENST00000604911 ERFEQ4G0M1 354 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms