RNA–Protein interactions for RNA: ENST00000603695.1

FOCAD-209, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-209ENST00000603695 HIC1Q14526 733 aa8.23□□□□□ -1.09
FOCAD-209ENST00000603695 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
FOCAD-209ENST00000603695 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
FOCAD-209ENST00000603695 DNMT3AQ9Y6K1 912 aaPredicted RBP8.22□□□□□ -1.09
FOCAD-209ENST00000603695 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
FOCAD-209ENST00000603695 SH3BP2P78314 561 aa8.21□□□□□ -1.1
FOCAD-209ENST00000603695 SCARF1Q14162 830 aa8.21□□□□□ -1.1
FOCAD-209ENST00000603695 TIMP2P16035 220 aa8.2□□□□□ -1.1
FOCAD-209ENST00000603695 IRS1P35568 1242 aa8.2□□□□□ -1.1
FOCAD-209ENST00000603695 NNTQ13423 1086 aa8.2□□□□□ -1.1
FOCAD-209ENST00000603695 CNTNAP3BQ96NU0 1288 aa8.2□□□□□ -1.1
FOCAD-209ENST00000603695 CNTNAP3Q9BZ76 1288 aa8.2□□□□□ -1.1
FOCAD-209ENST00000603695 IGHA1P01876 353 aa8.19□□□□□ -1.1
FOCAD-209ENST00000603695 JUNDP17535 347 aa8.18□□□□□ -1.1
FOCAD-209ENST00000603695 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
FOCAD-209ENST00000603695 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
FOCAD-209ENST00000603695 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
FOCAD-209ENST00000603695 MAN1A2O60476 641 aa8.17□□□□□ -1.1
FOCAD-209ENST00000603695 SYMPKQ92797 1274 aaKnown RBP8.17□□□□□ -1.1
FOCAD-209ENST00000603695 CFAP44Q96MT7 982 aa8.17□□□□□ -1.1
FOCAD-209ENST00000603695 URB2Q14146 1524 aaKnown RBP8.17□□□□□ -1.1
FOCAD-209ENST00000603695 DNMBPQ6XZF7 1577 aa8.17□□□□□ -1.1
FOCAD-209ENST00000603695 WDR4P57081 412 aaKnown RBP8.16□□□□□ -1.1
FOCAD-209ENST00000603695 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
FOCAD-209ENST00000603695 NUDT12Q9BQG2 462 aa8.16□□□□□ -1.1
FOCAD-209ENST00000603695 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
FOCAD-209ENST00000603695 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 SEMA3EO15041 775 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 GNPATO15228 680 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 GPR37O15354 613 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 C6orf118Q5T5N4 469 aa8.15□□□□□ -1.1
FOCAD-209ENST00000603695 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
FOCAD-209ENST00000603695 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 IFT140Q96RY7 1462 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 KDM4AO75164 1064 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 ADH1CP00326 375 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 CD46P15529 392 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
FOCAD-209ENST00000603695 RBM26Q5T8P6 1007 aaKnown RBP8.14□□□□□ -1.11
FOCAD-209ENST00000603695 ADAM23O75077 832 aa8.13□□□□□ -1.11
FOCAD-209ENST00000603695 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
FOCAD-209ENST00000603695 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
FOCAD-209ENST00000603695 COL25A1Q9BXS0 654 aaPredicted RBP8.12□□□□□ -1.11
FOCAD-209ENST00000603695 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
FOCAD-209ENST00000603695 ARHGEF15O94989 841 aa8.11□□□□□ -1.11
FOCAD-209ENST00000603695 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
FOCAD-209ENST00000603695 HOXA2O43364 376 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 FOXK2Q01167 660 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 BAP1Q92560 729 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 DNMT3LQ9UJW3 386 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 WDR97A6NE52 1622 aa8.1□□□□□ -1.11
FOCAD-209ENST00000603695 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
FOCAD-209ENST00000603695 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
FOCAD-209ENST00000603695 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
FOCAD-209ENST00000603695 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
FOCAD-209ENST00000603695 ITGB2P05107 769 aa8.07□□□□□ -1.12
FOCAD-209ENST00000603695 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
FOCAD-209ENST00000603695 MPNDQ8N594 471 aa8.07□□□□□ -1.12
FOCAD-209ENST00000603695 POLA1P09884 1462 aaPredicted RBP8.06□□□□□ -1.12
FOCAD-209ENST00000603695 CCNYL3P0C7X3 344 aa8.06□□□□□ -1.12
FOCAD-209ENST00000603695 EIF4G3O43432 1585 aaKnown RBP8.05□□□□□ -1.12
FOCAD-209ENST00000603695 SOS2Q07890 1332 aaPredicted RBP8.05□□□□□ -1.12
FOCAD-209ENST00000603695 TARBP1Q13395 1621 aaKnown RBP8.05□□□□□ -1.12
FOCAD-209ENST00000603695 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
FOCAD-209ENST00000603695 BMP2P12643 396 aa8.05□□□□□ -1.12
FOCAD-209ENST00000603695 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
FOCAD-209ENST00000603695 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
FOCAD-209ENST00000603695 NR3C2P08235 984 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
FOCAD-209ENST00000603695 USP46P62068 366 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 RETREG3Q86VR2 466 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 KRTAP1-3Q8IUG1 177 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
FOCAD-209ENST00000603695 SOGA1O94964 1423 aa8.03□□□□□ -1.12
FOCAD-209ENST00000603695 CUX1P39880 1505 aa8.03□□□□□ -1.12
FOCAD-209ENST00000603695 MSTNO14793 375 aa8.03□□□□□ -1.12
FOCAD-209ENST00000603695 PLA2G4EQ3MJ16 856 aa8.03□□□□□ -1.12
FOCAD-209ENST00000603695 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
FOCAD-209ENST00000603695 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
FOCAD-209ENST00000603695 MS4A1P11836 297 aa8.02□□□□□ -1.13
FOCAD-209ENST00000603695 PTSQ03393 145 aa8.02□□□□□ -1.13
FOCAD-209ENST00000603695 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
FOCAD-209ENST00000603695 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
FOCAD-209ENST00000603695 BIVM-ERCC5R4GMW8 1640 aa8□□□□□ -1.13
FOCAD-209ENST00000603695 Q8N3U1 123 aa8□□□□□ -1.13
FOCAD-209ENST00000603695 MEIOBQ8N635 442 aa8□□□□□ -1.13
FOCAD-209ENST00000603695 SCARF2Q96GP6 870 aaPredicted RBP8□□□□□ -1.13
FOCAD-209ENST00000603695 WRNQ14191 1432 aaPredicted RBP eCLIP8□□□□□ -1.13
FOCAD-209ENST00000603695 TOP2BQ02880 1626 aa8□□□□□ -1.13
FOCAD-209ENST00000603695 PROCP04070 461 aa7.99□□□□□ -1.13
FOCAD-209ENST00000603695 CDK15Q96Q40 435 aa7.99□□□□□ -1.13
FOCAD-209ENST00000603695 PCDHGC3Q9UN70 934 aa7.99□□□□□ -1.13
FOCAD-209ENST00000603695 MAGI1Q96QZ7 1491 aaPredicted RBP7.99□□□□□ -1.13
FOCAD-209ENST00000603695 RAD54L2Q9Y4B4 1467 aa7.99□□□□□ -1.13
FOCAD-209ENST00000603695 KCNH2Q12809 1159 aa7.98□□□□□ -1.13
FOCAD-209ENST00000603695 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
FOCAD-209ENST00000603695 PTPRNQ16849 979 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms