RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 WASLO00401 505 aaPredicted RBP22.45■■□□□ 1.18
GRAMD1A-213ENST00000603669 R3HDM1Q15032 1099 aaKnown RBP22.44■■□□□ 1.18
GRAMD1A-213ENST00000603669 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
GRAMD1A-213ENST00000603669 LRP5O75197 1615 aa22.42■■□□□ 1.18
GRAMD1A-213ENST00000603669 NRAPQ86VF7 1730 aa22.42■■□□□ 1.18
GRAMD1A-213ENST00000603669 TRPM3Q9HCF6 1732 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-213ENST00000603669 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
GRAMD1A-213ENST00000603669 EZH2Q15910 746 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-213ENST00000603669 DCAF11Q8TEB1 546 aa22.41■■□□□ 1.18
GRAMD1A-213ENST00000603669 CHRNA2Q15822 529 aa22.4■■□□□ 1.18
GRAMD1A-213ENST00000603669 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-213ENST00000603669 ADGRB2O60241 1585 aa22.39■■□□□ 1.18
GRAMD1A-213ENST00000603669 ALS2Q96Q42 1657 aa22.39■■□□□ 1.17
GRAMD1A-213ENST00000603669 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
GRAMD1A-213ENST00000603669 SPATA31A1Q5TZJ5 1347 aa22.38■■□□□ 1.17
GRAMD1A-213ENST00000603669 TRIM37O94972 964 aa22.38■■□□□ 1.17
GRAMD1A-213ENST00000603669 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
GRAMD1A-213ENST00000603669 STRN4Q9NRL3 753 aa22.38■■□□□ 1.17
GRAMD1A-213ENST00000603669 ZC3H6P61129 1189 aaKnown RBP22.37■■□□□ 1.17
GRAMD1A-213ENST00000603669 NUDT16Q96DE0 195 aaKnown RBP22.37■■□□□ 1.17
GRAMD1A-213ENST00000603669 KIAA0232Q92628 1395 aa22.37■■□□□ 1.17
GRAMD1A-213ENST00000603669 TULP4Q9NRJ4 1543 aa22.36■■□□□ 1.17
GRAMD1A-213ENST00000603669 CAMKK2Q96RR4 588 aa22.36■■□□□ 1.17
GRAMD1A-213ENST00000603669 FAM196AQ6ZSG2 479 aa22.35■■□□□ 1.17
GRAMD1A-213ENST00000603669 USP35Q9P2H5 1018 aa22.35■■□□□ 1.17
GRAMD1A-213ENST00000603669 DISP2A7MBM2 1401 aa22.33■■□□□ 1.17
GRAMD1A-213ENST00000603669 APBA3O96018 575 aa22.33■■□□□ 1.17
GRAMD1A-213ENST00000603669 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
GRAMD1A-213ENST00000603669 RGPD1P0DJD0 1748 aa22.31■■□□□ 1.16
GRAMD1A-213ENST00000603669 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
GRAMD1A-213ENST00000603669 EVA1CP58658 441 aa22.31■■□□□ 1.16
GRAMD1A-213ENST00000603669 CDK19Q9BWU1 502 aa22.31■■□□□ 1.16
GRAMD1A-213ENST00000603669 NBPF8Q3BBV2 869 aa22.29■■□□□ 1.16
GRAMD1A-213ENST00000603669 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
GRAMD1A-213ENST00000603669 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
GRAMD1A-213ENST00000603669 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
GRAMD1A-213ENST00000603669 ACEP12821 1306 aa22.28■■□□□ 1.16
GRAMD1A-213ENST00000603669 ATP7BP35670 1465 aa22.27■■□□□ 1.16
GRAMD1A-213ENST00000603669 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
GRAMD1A-213ENST00000603669 BARGINQ6ZT62 677 aa22.26■■□□□ 1.15
GRAMD1A-213ENST00000603669 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
GRAMD1A-213ENST00000603669 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
GRAMD1A-213ENST00000603669 CCDC61Q9Y6R9 512 aa22.25■■□□□ 1.15
GRAMD1A-213ENST00000603669 PLEKHG3A1L390 1219 aa22.23■■□□□ 1.15
GRAMD1A-213ENST00000603669 SSH2Q76I76 1423 aa22.23■■□□□ 1.15
GRAMD1A-213ENST00000603669 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
GRAMD1A-213ENST00000603669 POLR3AO14802 1390 aaPredicted RBP22.22■■□□□ 1.15
GRAMD1A-213ENST00000603669 CAMTA1Q9Y6Y1 1673 aa22.2■■□□□ 1.15
GRAMD1A-213ENST00000603669 NBPF14Q5TI25 921 aa22.2■■□□□ 1.14
GRAMD1A-213ENST00000603669 PARD3Q8TEW0 1356 aa22.2■■□□□ 1.14
GRAMD1A-213ENST00000603669 PHRF1Q9P1Y6 1649 aaKnown RBP22.18■■□□□ 1.14
GRAMD1A-213ENST00000603669 GCP02774 474 aa22.18■■□□□ 1.14
GRAMD1A-213ENST00000603669 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
GRAMD1A-213ENST00000603669 NBPF1Q3BBV0 1214 aa22.16■■□□□ 1.14
GRAMD1A-213ENST00000603669 NLRP13Q86W25 1043 aa22.16■■□□□ 1.14
GRAMD1A-213ENST00000603669 CPDO75976 1380 aa22.15■■□□□ 1.14
GRAMD1A-213ENST00000603669 ITSN1Q15811 1721 aa22.15■■□□□ 1.14
GRAMD1A-213ENST00000603669 USP19O94966 1318 aa22.15■■□□□ 1.14
GRAMD1A-213ENST00000603669 THRAP3Q9Y2W1 955 aaKnown RBP22.15■■□□□ 1.14
GRAMD1A-213ENST00000603669 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.13
GRAMD1A-213ENST00000603669 YY1P25490 414 aa22.13■■□□□ 1.13
GRAMD1A-213ENST00000603669 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
GRAMD1A-213ENST00000603669 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
GRAMD1A-213ENST00000603669 SPON1Q9HCB6 807 aa22.12■■□□□ 1.13
GRAMD1A-213ENST00000603669 NRKQ7Z2Y5 1582 aa22.11■■□□□ 1.13
GRAMD1A-213ENST00000603669 KCNQ2O43526 872 aa22.1■■□□□ 1.13
GRAMD1A-213ENST00000603669 PPP1R1BQ9UD71 204 aaPredicted RBP22.1■■□□□ 1.13
GRAMD1A-213ENST00000603669 LMO7Q8WWI1 1683 aa22.09■■□□□ 1.13
GRAMD1A-213ENST00000603669 TOPAZ1Q8N9V7 1692 aa22.08■■□□□ 1.13
GRAMD1A-213ENST00000603669 PPIP5K1Q6PFW1 1433 aa22.08■■□□□ 1.13
GRAMD1A-213ENST00000603669 NLRP6P59044 892 aa22.08■■□□□ 1.13
GRAMD1A-213ENST00000603669 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.13
GRAMD1A-213ENST00000603669 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
GRAMD1A-213ENST00000603669 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.12
GRAMD1A-213ENST00000603669 RREB1Q92766 1687 aa22.07■■□□□ 1.12
GRAMD1A-213ENST00000603669 NUP188Q5SRE5 1749 aa22.07■■□□□ 1.12
GRAMD1A-213ENST00000603669 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
GRAMD1A-213ENST00000603669 CRB1P82279 1406 aa22.06■■□□□ 1.12
GRAMD1A-213ENST00000603669 DDB1Q16531 1140 aa22.05■■□□□ 1.12
GRAMD1A-213ENST00000603669 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
GRAMD1A-213ENST00000603669 PLSCR1O15162 318 aa22.04■■□□□ 1.12
GRAMD1A-213ENST00000603669 TOM1L2Q6ZVM7 507 aa22.04■■□□□ 1.12
GRAMD1A-213ENST00000603669 AXIN2Q9Y2T1 843 aa22.04■■□□□ 1.12
GRAMD1A-213ENST00000603669 PDGFDQ9GZP0 370 aaPredicted RBP22.03■■□□□ 1.12
GRAMD1A-213ENST00000603669 ANO8Q9HCE9 1232 aaPredicted RBP22.03■■□□□ 1.12
GRAMD1A-213ENST00000603669 AATKQ6ZMQ8 1374 aa22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 PROM2Q8N271 834 aa22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 BCL11BQ9C0K0 894 aaPredicted RBP22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 OVOS2A0A0G2JMS6 1433 aa22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 OVOS2A0A0J9YW53 1432 aa22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 OVOS2Q6IE36 1432 aa22.02■■□□□ 1.12
GRAMD1A-213ENST00000603669 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
GRAMD1A-213ENST00000603669 DCAF8L1A6NGE4 600 aa22■■□□□ 1.11
GRAMD1A-213ENST00000603669 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
GRAMD1A-213ENST00000603669 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
GRAMD1A-213ENST00000603669 USP6P35125 1406 aa21.99■■□□□ 1.11
GRAMD1A-213ENST00000603669 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
GRAMD1A-213ENST00000603669 WDR17Q8IZU2 1322 aa21.97■■□□□ 1.11
GRAMD1A-213ENST00000603669 PEAK1Q9H792 1746 aa21.97■■□□□ 1.11
GRAMD1A-213ENST00000603669 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms