RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 ARHGEF10O15013 1369 aa21.64■■□□□ 1.05
CDCA3-211ENST00000603043 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
CDCA3-211ENST00000603043 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
CDCA3-211ENST00000603043 LMOD2Q6P5Q4 547 aa21.64■■□□□ 1.05
CDCA3-211ENST00000603043 TERF2IPQ9NYB0 399 aa21.64■■□□□ 1.05
CDCA3-211ENST00000603043 SPATA31A6Q5VVP1 1343 aa21.64■■□□□ 1.05
CDCA3-211ENST00000603043 A0A1W2PP64 1363 aa21.63■■□□□ 1.05
CDCA3-211ENST00000603043 BRD4O60885 1362 aaPredicted RBP21.63■■□□□ 1.05
CDCA3-211ENST00000603043 HDGFL2Q7Z4V5 671 aaPredicted RBP21.63■■□□□ 1.05
CDCA3-211ENST00000603043 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
CDCA3-211ENST00000603043 SSH2Q76I76 1423 aa21.61■■□□□ 1.05
CDCA3-211ENST00000603043 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
CDCA3-211ENST00000603043 MED1Q15648 1581 aaPredicted RBP21.58■■□□□ 1.05
CDCA3-211ENST00000603043 ABCA3Q99758 1704 aa21.58■■□□□ 1.05
CDCA3-211ENST00000603043 LRP6O75581 1613 aa21.58■■□□□ 1.04
CDCA3-211ENST00000603043 PIK3C2AO00443 1686 aa21.58■■□□□ 1.04
CDCA3-211ENST00000603043 NUTM2BA6NNL0 878 aaPredicted RBP21.57■■□□□ 1.04
CDCA3-211ENST00000603043 NUTM2EB1AL46 878 aaPredicted RBP21.57■■□□□ 1.04
CDCA3-211ENST00000603043 NUTM2AQ8IVF1 878 aaPredicted RBP21.57■■□□□ 1.04
CDCA3-211ENST00000603043 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
CDCA3-211ENST00000603043 EDC4Q6P2E9 1401 aaKnown RBP21.57■■□□□ 1.04
CDCA3-211ENST00000603043 TTC21BQ7Z4L5 1316 aa21.57■■□□□ 1.04
CDCA3-211ENST00000603043 CRYBG1Q9Y4K1 1723 aa21.56■■□□□ 1.04
CDCA3-211ENST00000603043 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
CDCA3-211ENST00000603043 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
CDCA3-211ENST00000603043 NUTM2GQ5VZR2 741 aa21.55■■□□□ 1.04
CDCA3-211ENST00000603043 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
CDCA3-211ENST00000603043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDCA3-211ENST00000603043 CABLES1Q8TDN4 633 aa21.54■■□□□ 1.04
CDCA3-211ENST00000603043 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
CDCA3-211ENST00000603043 WASHC2AQ641Q2 1341 aa21.53■■□□□ 1.04
CDCA3-211ENST00000603043 PHRF1Q9P1Y6 1649 aaKnown RBP21.53■■□□□ 1.04
CDCA3-211ENST00000603043 HAP1P54257 671 aaPredicted RBP21.52■■□□□ 1.04
CDCA3-211ENST00000603043 NLRP6P59044 892 aa21.51■■□□□ 1.03
CDCA3-211ENST00000603043 NLRP13Q86W25 1043 aa21.51■■□□□ 1.03
CDCA3-211ENST00000603043 MEX3CQ5U5Q3 659 aaKnown RBP21.5■■□□□ 1.03
CDCA3-211ENST00000603043 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
CDCA3-211ENST00000603043 USP54Q70EL1 1684 aa21.49■■□□□ 1.03
CDCA3-211ENST00000603043 NME9Q86XW9 330 aa21.49■■□□□ 1.03
CDCA3-211ENST00000603043 KIF20BQ96Q89 1820 aa21.49■■□□□ 1.03
CDCA3-211ENST00000603043 NSD3Q9BZ95 1437 aa21.49■■□□□ 1.03
CDCA3-211ENST00000603043 CARD14Q9BXL6 1004 aa21.48■■□□□ 1.03
CDCA3-211ENST00000603043 USP19O94966 1318 aa21.48■■□□□ 1.03
CDCA3-211ENST00000603043 PANK3Q9H999 370 aa21.48■■□□□ 1.03
CDCA3-211ENST00000603043 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
CDCA3-211ENST00000603043 SLIT3O75094 1523 aa21.46■■□□□ 1.03
CDCA3-211ENST00000603043 C8orf37Q96NL8 207 aa21.45■■□□□ 1.02
CDCA3-211ENST00000603043 ZRANB1Q9UGI0 708 aa21.45■■□□□ 1.02
CDCA3-211ENST00000603043 OVOS2A0A0J9YW53 1432 aa21.44■■□□□ 1.02
CDCA3-211ENST00000603043 OVOS2Q6IE36 1432 aa21.44■■□□□ 1.02
CDCA3-211ENST00000603043 GCP02774 474 aa21.43■■□□□ 1.02
CDCA3-211ENST00000603043 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
CDCA3-211ENST00000603043 FYB1O15117 783 aa21.41■■□□□ 1.02
CDCA3-211ENST00000603043 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
CDCA3-211ENST00000603043 NGLY1Q96IV0 654 aa21.41■■□□□ 1.02
CDCA3-211ENST00000603043 PLCH1Q4KWH8 1693 aa21.41■■□□□ 1.02
CDCA3-211ENST00000603043 ZC3H6P61129 1189 aaKnown RBP21.4■■□□□ 1.02
CDCA3-211ENST00000603043 KCNH5Q8NCM2 988 aa21.4■■□□□ 1.02
CDCA3-211ENST00000603043 COG3Q96JB2 828 aa21.4■■□□□ 1.02
CDCA3-211ENST00000603043 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
CDCA3-211ENST00000603043 COL14A1Q05707 1796 aaKnown RBP21.4■■□□□ 1.02
CDCA3-211ENST00000603043 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
CDCA3-211ENST00000603043 NFAT5O94916 1531 aa21.39■■□□□ 1.01
CDCA3-211ENST00000603043 SOX12O15370 315 aa21.39■■□□□ 1.01
CDCA3-211ENST00000603043 AFF2P51816 1311 aa21.38■■□□□ 1.01
CDCA3-211ENST00000603043 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
CDCA3-211ENST00000603043 PRDM11Q9NQV5 511 aa21.38■■□□□ 1.01
CDCA3-211ENST00000603043 CPDO75976 1380 aa21.38■■□□□ 1.01
CDCA3-211ENST00000603043 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
CDCA3-211ENST00000603043 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
CDCA3-211ENST00000603043 NWD2Q9ULI1 1742 aa21.37■■□□□ 1.01
CDCA3-211ENST00000603043 LTN1O94822 1766 aa21.36■■□□□ 1.01
CDCA3-211ENST00000603043 SLIT2O94813 1529 aa21.35■■□□□ 1.01
CDCA3-211ENST00000603043 FNBP4Q8N3X1 1017 aaPredicted RBP21.35■■□□□ 1.01
CDCA3-211ENST00000603043 CHRNA2Q15822 529 aa21.34■■□□□ 1.01
CDCA3-211ENST00000603043 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.34■■□□□ 1.01
CDCA3-211ENST00000603043 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
CDCA3-211ENST00000603043 RGS17Q9UGC6 210 aaPredicted RBP21.34■■□□□ 1.01
CDCA3-211ENST00000603043 NSD2O96028 1365 aa21.33■■□□□ 1.01
CDCA3-211ENST00000603043 ZNF772Q68DY9 489 aaPredicted RBP21.33■■□□□ 1.01
CDCA3-211ENST00000603043 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CDCA3-211ENST00000603043 USP21Q9UK80 565 aa21.32■■□□□ 1
CDCA3-211ENST00000603043 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
CDCA3-211ENST00000603043 LMO7Q8WWI1 1683 aa21.32■■□□□ 1
CDCA3-211ENST00000603043 NRAPQ86VF7 1730 aa21.31■■□□□ 1
CDCA3-211ENST00000603043 ARHGEF25Q86VW2 580 aa21.31■■□□□ 1
CDCA3-211ENST00000603043 BTG4Q9NY30 223 aa21.31■■□□□ 1
CDCA3-211ENST00000603043 COL18A1P39060 1754 aa21.31■■□□□ 1
CDCA3-211ENST00000603043 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
CDCA3-211ENST00000603043 AATKQ6ZMQ8 1374 aa21.29■■□□□ 1
CDCA3-211ENST00000603043 UNC5CLQ8IV45 518 aa21.29■■□□□ 1
CDCA3-211ENST00000603043 RGPD5Q99666 1765 aa21.29■■□□□ 1
CDCA3-211ENST00000603043 CAMTA1Q9Y6Y1 1673 aa21.28■■□□□ 1
CDCA3-211ENST00000603043 ABCC6O95255 1503 aa21.28■■□□□ 1
CDCA3-211ENST00000603043 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
CDCA3-211ENST00000603043 FBLN1P23142 703 aa21.27■■□□□ 1
CDCA3-211ENST00000603043 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
CDCA3-211ENST00000603043 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
CDCA3-211ENST00000603043 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
CDCA3-211ENST00000603043 TRPC5Q9UL62 973 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms