RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
UBE2E3-214ENST00000602970 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
UBE2E3-214ENST00000602970 CD163L1Q9NR16 1453 aa16.45■□□□□ 0.22
UBE2E3-214ENST00000602970 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
UBE2E3-214ENST00000602970 PPIP5K1Q6PFW1 1433 aa16.45■□□□□ 0.22
UBE2E3-214ENST00000602970 A0A1W2PP64 1363 aa16.44■□□□□ 0.22
UBE2E3-214ENST00000602970 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
UBE2E3-214ENST00000602970 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
UBE2E3-214ENST00000602970 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
UBE2E3-214ENST00000602970 CNGB1Q14028 1251 aaPredicted RBP16.43■□□□□ 0.22
UBE2E3-214ENST00000602970 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
UBE2E3-214ENST00000602970 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
UBE2E3-214ENST00000602970 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
UBE2E3-214ENST00000602970 RALBP1Q15311 655 aa16.41■□□□□ 0.22
UBE2E3-214ENST00000602970 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
UBE2E3-214ENST00000602970 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
UBE2E3-214ENST00000602970 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
UBE2E3-214ENST00000602970 XIRP1Q702N8 1843 aaKnown RBP16.4■□□□□ 0.22
UBE2E3-214ENST00000602970 NRKQ7Z2Y5 1582 aa16.4■□□□□ 0.22
UBE2E3-214ENST00000602970 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
UBE2E3-214ENST00000602970 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
UBE2E3-214ENST00000602970 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
UBE2E3-214ENST00000602970 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
UBE2E3-214ENST00000602970 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
UBE2E3-214ENST00000602970 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
UBE2E3-214ENST00000602970 CPSF1Q10570 1443 aaKnown RBP16.37■□□□□ 0.21
UBE2E3-214ENST00000602970 GABBR2O75899 941 aa16.37■□□□□ 0.21
UBE2E3-214ENST00000602970 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
UBE2E3-214ENST00000602970 NSD2O96028 1365 aa16.37■□□□□ 0.21
UBE2E3-214ENST00000602970 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
UBE2E3-214ENST00000602970 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
UBE2E3-214ENST00000602970 TMEM94Q12767 1356 aa16.35■□□□□ 0.21
UBE2E3-214ENST00000602970 DCCP43146 1447 aa16.34■□□□□ 0.21
UBE2E3-214ENST00000602970 KIF1AQ12756 1690 aa16.33■□□□□ 0.2
UBE2E3-214ENST00000602970 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
UBE2E3-214ENST00000602970 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
UBE2E3-214ENST00000602970 LRRC7Q96NW7 1537 aa16.32■□□□□ 0.2
UBE2E3-214ENST00000602970 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
UBE2E3-214ENST00000602970 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
UBE2E3-214ENST00000602970 USP6P35125 1406 aa16.31■□□□□ 0.2
UBE2E3-214ENST00000602970 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
UBE2E3-214ENST00000602970 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
UBE2E3-214ENST00000602970 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
UBE2E3-214ENST00000602970 ACEP12821 1306 aa16.3■□□□□ 0.2
UBE2E3-214ENST00000602970 MSH6P52701 1360 aa16.28■□□□□ 0.2
UBE2E3-214ENST00000602970 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
UBE2E3-214ENST00000602970 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
UBE2E3-214ENST00000602970 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
UBE2E3-214ENST00000602970 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
UBE2E3-214ENST00000602970 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
UBE2E3-214ENST00000602970 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
UBE2E3-214ENST00000602970 MST1RQ04912 1400 aa16.27■□□□□ 0.19
UBE2E3-214ENST00000602970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE2E3-214ENST00000602970 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
UBE2E3-214ENST00000602970 PIK3C2AO00443 1686 aa16.26■□□□□ 0.19
UBE2E3-214ENST00000602970 USP54Q70EL1 1684 aa16.26■□□□□ 0.19
UBE2E3-214ENST00000602970 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
UBE2E3-214ENST00000602970 FYB1O15117 783 aa16.25■□□□□ 0.19
UBE2E3-214ENST00000602970 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
UBE2E3-214ENST00000602970 PHF8Q9UPP1 1060 aa16.25■□□□□ 0.19
UBE2E3-214ENST00000602970 ATF3P18847 181 aa16.24■□□□□ 0.19
UBE2E3-214ENST00000602970 TTC21BQ7Z4L5 1316 aa16.23■□□□□ 0.19
UBE2E3-214ENST00000602970 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 NME9Q86XW9 330 aa16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
UBE2E3-214ENST00000602970 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
UBE2E3-214ENST00000602970 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
UBE2E3-214ENST00000602970 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
UBE2E3-214ENST00000602970 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
UBE2E3-214ENST00000602970 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
UBE2E3-214ENST00000602970 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
UBE2E3-214ENST00000602970 PNISRQ8TF01 805 aaKnown RBP16.18■□□□□ 0.18
UBE2E3-214ENST00000602970 COG3Q96JB2 828 aa16.18■□□□□ 0.18
UBE2E3-214ENST00000602970 ORAI2Q96SN7 254 aa16.18■□□□□ 0.18
UBE2E3-214ENST00000602970 PROM2Q8N271 834 aa16.17■□□□□ 0.18
UBE2E3-214ENST00000602970 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
UBE2E3-214ENST00000602970 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
UBE2E3-214ENST00000602970 ALS2Q96Q42 1657 aa16.16■□□□□ 0.18
UBE2E3-214ENST00000602970 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
UBE2E3-214ENST00000602970 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
UBE2E3-214ENST00000602970 PSME1Q06323 249 aa16.14■□□□□ 0.17
UBE2E3-214ENST00000602970 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
UBE2E3-214ENST00000602970 MTHFSP49914 203 aa16.13■□□□□ 0.17
UBE2E3-214ENST00000602970 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
UBE2E3-214ENST00000602970 CDK12Q9NYV4 1490 aaPredicted RBP16.13■□□□□ 0.17
UBE2E3-214ENST00000602970 INSRP06213 1382 aa16.13■□□□□ 0.17
UBE2E3-214ENST00000602970 NHSL1Q5SYE7 1610 aa16.12■□□□□ 0.17
UBE2E3-214ENST00000602970 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
UBE2E3-214ENST00000602970 FOXO3O43524 673 aa16.12■□□□□ 0.17
UBE2E3-214ENST00000602970 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
UBE2E3-214ENST00000602970 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms