RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 MARF1Q9Y4F3 1742 aaKnown RBP22.65■■□□□ 1.22
CCDC61-208ENST00000601763 NGLY1Q96IV0 654 aa22.64■■□□□ 1.21
CCDC61-208ENST00000601763 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
CCDC61-208ENST00000601763 USP6P35125 1406 aa22.64■■□□□ 1.21
CCDC61-208ENST00000601763 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
CCDC61-208ENST00000601763 CD163L1Q9NR16 1453 aa22.63■■□□□ 1.21
CCDC61-208ENST00000601763 SSH2Q76I76 1423 aa22.63■■□□□ 1.21
CCDC61-208ENST00000601763 AKAP12Q02952 1782 aa22.63■■□□□ 1.21
CCDC61-208ENST00000601763 CPSF1Q10570 1443 aaKnown RBP22.61■■□□□ 1.21
CCDC61-208ENST00000601763 TMC1Q8TDI8 760 aa22.6■■□□□ 1.21
CCDC61-208ENST00000601763 HSPA5P11021 654 aaKnown RBP22.59■■□□□ 1.21
CCDC61-208ENST00000601763 PHRF1Q9P1Y6 1649 aaKnown RBP22.58■■□□□ 1.21
CCDC61-208ENST00000601763 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
CCDC61-208ENST00000601763 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
CCDC61-208ENST00000601763 NRKQ7Z2Y5 1582 aa22.58■■□□□ 1.2
CCDC61-208ENST00000601763 ABTB2Q8N961 1025 aa22.57■■□□□ 1.2
CCDC61-208ENST00000601763 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
CCDC61-208ENST00000601763 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
CCDC61-208ENST00000601763 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
CCDC61-208ENST00000601763 FAM83GA6ND36 823 aa22.56■■□□□ 1.2
CCDC61-208ENST00000601763 ZNF772Q68DY9 489 aaPredicted RBP22.56■■□□□ 1.2
CCDC61-208ENST00000601763 USP21Q9UK80 565 aa22.56■■□□□ 1.2
CCDC61-208ENST00000601763 TTC21BQ7Z4L5 1316 aa22.56■■□□□ 1.2
CCDC61-208ENST00000601763 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
CCDC61-208ENST00000601763 ZRANB1Q9UGI0 708 aa22.55■■□□□ 1.2
CCDC61-208ENST00000601763 SLIT2O94813 1529 aa22.54■■□□□ 1.2
CCDC61-208ENST00000601763 TMF1P82094 1093 aa22.54■■□□□ 1.2
CCDC61-208ENST00000601763 QTRT2Q9H974 415 aaKnown RBP22.54■■□□□ 1.2
CCDC61-208ENST00000601763 A0A1W2PP64 1363 aa22.53■■□□□ 1.2
CCDC61-208ENST00000601763 PLCH1Q4KWH8 1693 aa22.53■■□□□ 1.2
CCDC61-208ENST00000601763 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
CCDC61-208ENST00000601763 USP19O94966 1318 aa22.53■■□□□ 1.2
CCDC61-208ENST00000601763 ZC3H6P61129 1189 aaKnown RBP22.52■■□□□ 1.2
CCDC61-208ENST00000601763 EIF4G2P78344 907 aaKnown RBP eCLIP22.52■■□□□ 1.2
CCDC61-208ENST00000601763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.52■■□□□ 1.2
CCDC61-208ENST00000601763 ZNF692Q9BU19 519 aaPredicted RBP22.52■■□□□ 1.2
CCDC61-208ENST00000601763 NLRP6P59044 892 aa22.5■■□□□ 1.19
CCDC61-208ENST00000601763 CHRNA2Q15822 529 aa22.5■■□□□ 1.19
CCDC61-208ENST00000601763 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
CCDC61-208ENST00000601763 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
CCDC61-208ENST00000601763 ATRNO75882 1429 aa22.49■■□□□ 1.19
CCDC61-208ENST00000601763 MYOM1P52179 1685 aa22.49■■□□□ 1.19
CCDC61-208ENST00000601763 NME9Q86XW9 330 aa22.49■■□□□ 1.19
CCDC61-208ENST00000601763 C11orf95C9JLR9 678 aaPredicted RBP22.48■■□□□ 1.19
CCDC61-208ENST00000601763 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
CCDC61-208ENST00000601763 RXRBP28702 533 aa22.47■■□□□ 1.19
CCDC61-208ENST00000601763 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
CCDC61-208ENST00000601763 SLIT3O75094 1523 aa22.47■■□□□ 1.19
CCDC61-208ENST00000601763 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
CCDC61-208ENST00000601763 GCP02774 474 aa22.46■■□□□ 1.19
CCDC61-208ENST00000601763 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
CCDC61-208ENST00000601763 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.45■■□□□ 1.19
CCDC61-208ENST00000601763 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.19
CCDC61-208ENST00000601763 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.18
CCDC61-208ENST00000601763 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
CCDC61-208ENST00000601763 TERF2IPQ9NYB0 399 aa22.45■■□□□ 1.18
CCDC61-208ENST00000601763 SOX12O15370 315 aa22.44■■□□□ 1.18
CCDC61-208ENST00000601763 SLC24A1O60721 1099 aa22.44■■□□□ 1.18
CCDC61-208ENST00000601763 EDC4Q6P2E9 1401 aaKnown RBP22.44■■□□□ 1.18
CCDC61-208ENST00000601763 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
CCDC61-208ENST00000601763 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
CCDC61-208ENST00000601763 TRPC5Q9UL62 973 aaPredicted RBP22.44■■□□□ 1.18
CCDC61-208ENST00000601763 NWD2Q9ULI1 1742 aa22.43■■□□□ 1.18
CCDC61-208ENST00000601763 GLI3P10071 1580 aa22.43■■□□□ 1.18
CCDC61-208ENST00000601763 RGS12O14924 1447 aa22.43■■□□□ 1.18
CCDC61-208ENST00000601763 RBM6P78332 1123 aaKnown RBP22.43■■□□□ 1.18
CCDC61-208ENST00000601763 ANKRD36BQ8N2N9 1353 aa22.42■■□□□ 1.18
CCDC61-208ENST00000601763 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
CCDC61-208ENST00000601763 SOCS7O14512 581 aa22.42■■□□□ 1.18
CCDC61-208ENST00000601763 ZBTB7CA1YPR0 619 aa22.41■■□□□ 1.18
CCDC61-208ENST00000601763 CARD14Q9BXL6 1004 aa22.41■■□□□ 1.18
CCDC61-208ENST00000601763 CAMTA1Q9Y6Y1 1673 aa22.4■■□□□ 1.18
CCDC61-208ENST00000601763 GJD4Q96KN9 370 aaPredicted RBP22.4■■□□□ 1.18
CCDC61-208ENST00000601763 LMO7Q8WWI1 1683 aa22.39■■□□□ 1.18
CCDC61-208ENST00000601763 CPDO75976 1380 aa22.39■■□□□ 1.18
CCDC61-208ENST00000601763 CDCA8Q53HL2 280 aa22.39■■□□□ 1.17
CCDC61-208ENST00000601763 NFAT5O94916 1531 aa22.39■■□□□ 1.17
CCDC61-208ENST00000601763 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
CCDC61-208ENST00000601763 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
CCDC61-208ENST00000601763 VPS72Q15906 364 aa22.37■■□□□ 1.17
CCDC61-208ENST00000601763 OVOS2A0A0J9YW53 1432 aa22.37■■□□□ 1.17
CCDC61-208ENST00000601763 OVOS2Q6IE36 1432 aa22.37■■□□□ 1.17
CCDC61-208ENST00000601763 CDK12Q9NYV4 1490 aaPredicted RBP22.36■■□□□ 1.17
CCDC61-208ENST00000601763 COL18A1P39060 1754 aa22.36■■□□□ 1.17
CCDC61-208ENST00000601763 FBLN1P23142 703 aa22.36■■□□□ 1.17
CCDC61-208ENST00000601763 CCDC9Q9Y3X0 531 aaKnown RBP22.36■■□□□ 1.17
CCDC61-208ENST00000601763 STRN4Q9NRL3 753 aa22.35■■□□□ 1.17
CCDC61-208ENST00000601763 AXIN2Q9Y2T1 843 aa22.35■■□□□ 1.17
CCDC61-208ENST00000601763 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
CCDC61-208ENST00000601763 FYB1O15117 783 aa22.33■■□□□ 1.17
CCDC61-208ENST00000601763 GGNBP2Q9H3C7 697 aa22.33■■□□□ 1.17
CCDC61-208ENST00000601763 NSD3Q9BZ95 1437 aa22.32■■□□□ 1.16
CCDC61-208ENST00000601763 RGPD5Q99666 1765 aa22.32■■□□□ 1.16
CCDC61-208ENST00000601763 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
CCDC61-208ENST00000601763 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
CCDC61-208ENST00000601763 LARP1Q6PKG0 1096 aaKnown RBP22.31■■□□□ 1.16
CCDC61-208ENST00000601763 SPATA31A5Q5VU36 1347 aa22.31■■□□□ 1.16
CCDC61-208ENST00000601763 SPATA31A7Q8IWB4 1347 aa22.31■■□□□ 1.16
CCDC61-208ENST00000601763 KCNH5Q8NCM2 988 aa22.3■■□□□ 1.16
CCDC61-208ENST00000601763 COL5A2P05997 1499 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms