RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 CABP2Q9NPB3 220 aa22.28■■□□□ 1.16
IRF3-226ENST00000600453 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
IRF3-226ENST00000600453 VPS72Q15906 364 aa22.26■■□□□ 1.15
IRF3-226ENST00000600453 ALS2Q96Q42 1657 aa22.26■■□□□ 1.15
IRF3-226ENST00000600453 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.26■■□□□ 1.15
IRF3-226ENST00000600453 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
IRF3-226ENST00000600453 CARD11Q9BXL7 1154 aa22.25■■□□□ 1.15
IRF3-226ENST00000600453 PPIP5K1Q6PFW1 1433 aa22.24■■□□□ 1.15
IRF3-226ENST00000600453 ABTB2Q8N961 1025 aa22.24■■□□□ 1.15
IRF3-226ENST00000600453 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
IRF3-226ENST00000600453 CABP1Q9NZU7 370 aa22.23■■□□□ 1.15
IRF3-226ENST00000600453 CCDC9Q9Y3X0 531 aaKnown RBP22.23■■□□□ 1.15
IRF3-226ENST00000600453 ATAD2Q6PL18 1390 aa22.23■■□□□ 1.15
IRF3-226ENST00000600453 TOPAZ1Q8N9V7 1692 aa22.22■■□□□ 1.15
IRF3-226ENST00000600453 NWD2Q9ULI1 1742 aa22.22■■□□□ 1.15
IRF3-226ENST00000600453 NLRP13Q86W25 1043 aa22.21■■□□□ 1.15
IRF3-226ENST00000600453 ZNF692Q9BU19 519 aaPredicted RBP22.21■■□□□ 1.15
IRF3-226ENST00000600453 PRDM11Q9NQV5 511 aa22.21■■□□□ 1.15
IRF3-226ENST00000600453 BTG4Q9NY30 223 aa22.21■■□□□ 1.15
IRF3-226ENST00000600453 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
IRF3-226ENST00000600453 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
IRF3-226ENST00000600453 ONECUT3O60422 494 aaPredicted RBP22.18■■□□□ 1.14
IRF3-226ENST00000600453 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
IRF3-226ENST00000600453 CCDC125Q86Z20 511 aa22.18■■□□□ 1.14
IRF3-226ENST00000600453 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
IRF3-226ENST00000600453 COL14A1Q05707 1796 aaKnown RBP22.17■■□□□ 1.14
IRF3-226ENST00000600453 PLCH1Q4KWH8 1693 aa22.16■■□□□ 1.14
IRF3-226ENST00000600453 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
IRF3-226ENST00000600453 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.13
IRF3-226ENST00000600453 SEPT12Q8IYM1 358 aa22.14■■□□□ 1.13
IRF3-226ENST00000600453 KIAA0232Q92628 1395 aa22.12■■□□□ 1.13
IRF3-226ENST00000600453 GLI3P10071 1580 aa22.12■■□□□ 1.13
IRF3-226ENST00000600453 NLRP6P59044 892 aa22.12■■□□□ 1.13
IRF3-226ENST00000600453 TIMELESSQ9UNS1 1208 aa22.12■■□□□ 1.13
IRF3-226ENST00000600453 USP6P35125 1406 aa22.12■■□□□ 1.13
IRF3-226ENST00000600453 GCP02774 474 aa22.11■■□□□ 1.13
IRF3-226ENST00000600453 EVA1CP58658 441 aa22.11■■□□□ 1.13
IRF3-226ENST00000600453 PUS7Q96PZ0 661 aaKnown RBP22.11■■□□□ 1.13
IRF3-226ENST00000600453 CRYBG1Q9Y4K1 1723 aa22.11■■□□□ 1.13
IRF3-226ENST00000600453 USP19O94966 1318 aa22.1■■□□□ 1.13
IRF3-226ENST00000600453 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
IRF3-226ENST00000600453 A0A0G2JS52 829 aa22.09■■□□□ 1.13
IRF3-226ENST00000600453 MYT1Q01538 1121 aa22.09■■□□□ 1.13
IRF3-226ENST00000600453 CHRNA2Q15822 529 aa22.09■■□□□ 1.13
IRF3-226ENST00000600453 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
IRF3-226ENST00000600453 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
IRF3-226ENST00000600453 KRT27Q7Z3Y8 459 aa22.08■■□□□ 1.13
IRF3-226ENST00000600453 CPDO75976 1380 aa22.08■■□□□ 1.12
IRF3-226ENST00000600453 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
IRF3-226ENST00000600453 TTC21AQ8NDW8 1320 aa22.06■■□□□ 1.12
IRF3-226ENST00000600453 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
IRF3-226ENST00000600453 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
IRF3-226ENST00000600453 STRN4Q9NRL3 753 aa22.06■■□□□ 1.12
IRF3-226ENST00000600453 NRAPQ86VF7 1730 aa22.06■■□□□ 1.12
IRF3-226ENST00000600453 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
IRF3-226ENST00000600453 SSH2Q76I76 1423 aa22.05■■□□□ 1.12
IRF3-226ENST00000600453 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
IRF3-226ENST00000600453 SF3B2Q13435 895 aaKnown RBP22.04■■□□□ 1.12
IRF3-226ENST00000600453 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
IRF3-226ENST00000600453 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
IRF3-226ENST00000600453 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
IRF3-226ENST00000600453 CPSF1Q10570 1443 aaKnown RBP22.03■■□□□ 1.12
IRF3-226ENST00000600453 SPATA31A1Q5TZJ5 1347 aa22.03■■□□□ 1.12
IRF3-226ENST00000600453 ST20-MTHFSA0A0A6YYL1 179 aa22.02■■□□□ 1.12
IRF3-226ENST00000600453 TERF2IPQ9NYB0 399 aa22.02■■□□□ 1.12
IRF3-226ENST00000600453 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
IRF3-226ENST00000600453 NRKQ7Z2Y5 1582 aa21.99■■□□□ 1.11
IRF3-226ENST00000600453 BLMP54132 1417 aaPredicted RBP21.99■■□□□ 1.11
IRF3-226ENST00000600453 BARGINQ6ZT62 677 aa21.99■■□□□ 1.11
IRF3-226ENST00000600453 THRAP3Q9Y2W1 955 aaKnown RBP21.99■■□□□ 1.11
IRF3-226ENST00000600453 AKAP12Q02952 1782 aa21.99■■□□□ 1.11
IRF3-226ENST00000600453 TESK2Q96S53 571 aa21.98■■□□□ 1.11
IRF3-226ENST00000600453 AATKQ6ZMQ8 1374 aa21.98■■□□□ 1.11
IRF3-226ENST00000600453 ZBTB7CA1YPR0 619 aa21.97■■□□□ 1.11
IRF3-226ENST00000600453 TCP11L2Q8N4U5 519 aa21.97■■□□□ 1.11
IRF3-226ENST00000600453 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
IRF3-226ENST00000600453 USP35Q9P2H5 1018 aa21.97■■□□□ 1.11
IRF3-226ENST00000600453 CAMTA1Q9Y6Y1 1673 aa21.96■■□□□ 1.11
IRF3-226ENST00000600453 LARP1Q6PKG0 1096 aaKnown RBP21.96■■□□□ 1.11
IRF3-226ENST00000600453 NINLQ9Y2I6 1382 aa21.96■■□□□ 1.11
IRF3-226ENST00000600453 SLIT3O75094 1523 aa21.96■■□□□ 1.11
IRF3-226ENST00000600453 TMF1P82094 1093 aa21.95■■□□□ 1.1
IRF3-226ENST00000600453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.95■■□□□ 1.1
IRF3-226ENST00000600453 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
IRF3-226ENST00000600453 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
IRF3-226ENST00000600453 PIK3C2AO00443 1686 aa21.93■■□□□ 1.1
IRF3-226ENST00000600453 PDE3BQ13370 1112 aa21.93■■□□□ 1.1
IRF3-226ENST00000600453 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
IRF3-226ENST00000600453 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
IRF3-226ENST00000600453 LMO7Q8WWI1 1683 aa21.91■■□□□ 1.1
IRF3-226ENST00000600453 USP47Q96K76 1375 aa21.91■■□□□ 1.1
IRF3-226ENST00000600453 FAM196AQ6ZSG2 479 aa21.91■■□□□ 1.1
IRF3-226ENST00000600453 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
IRF3-226ENST00000600453 EP400Q96L91 3159 aa21.9■■□□□ 1.1
IRF3-226ENST00000600453 C11orf95C9JLR9 678 aaPredicted RBP21.9■■□□□ 1.1
IRF3-226ENST00000600453 BAG6P46379 1132 aa21.9■■□□□ 1.1
IRF3-226ENST00000600453 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
IRF3-226ENST00000600453 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
IRF3-226ENST00000600453 COL5A2P05997 1499 aaPredicted RBP21.9■■□□□ 1.1
IRF3-226ENST00000600453 CRB1P82279 1406 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms