RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
TGFB1-204ENST00000600196 PXDNQ92626 1479 aa16.85■□□□□ 0.29
TGFB1-204ENST00000600196 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
TGFB1-204ENST00000600196 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
TGFB1-204ENST00000600196 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
TGFB1-204ENST00000600196 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
TGFB1-204ENST00000600196 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
TGFB1-204ENST00000600196 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
TGFB1-204ENST00000600196 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
TGFB1-204ENST00000600196 TNS3Q68CZ2 1445 aa16.8■□□□□ 0.28
TGFB1-204ENST00000600196 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
TGFB1-204ENST00000600196 FYB1O15117 783 aa16.8■□□□□ 0.28
TGFB1-204ENST00000600196 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
TGFB1-204ENST00000600196 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
TGFB1-204ENST00000600196 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
TGFB1-204ENST00000600196 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
TGFB1-204ENST00000600196 TRPM3Q9HCF6 1732 aaPredicted RBP16.78■□□□□ 0.28
TGFB1-204ENST00000600196 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-204ENST00000600196 COG3Q96JB2 828 aa16.77■□□□□ 0.28
TGFB1-204ENST00000600196 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
TGFB1-204ENST00000600196 JCADQ9P266 1359 aa16.77■□□□□ 0.27
TGFB1-204ENST00000600196 NLRP6P59044 892 aa16.76■□□□□ 0.27
TGFB1-204ENST00000600196 USP19O94966 1318 aa16.75■□□□□ 0.27
TGFB1-204ENST00000600196 COL16A1Q07092 1604 aaPredicted RBP16.75■□□□□ 0.27
TGFB1-204ENST00000600196 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
TGFB1-204ENST00000600196 PHLPP1O60346 1717 aa16.75■□□□□ 0.27
TGFB1-204ENST00000600196 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
TGFB1-204ENST00000600196 RALBP1Q15311 655 aa16.74■□□□□ 0.27
TGFB1-204ENST00000600196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
TGFB1-204ENST00000600196 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
TGFB1-204ENST00000600196 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
TGFB1-204ENST00000600196 HSPA1LP34931 641 aa16.73■□□□□ 0.27
TGFB1-204ENST00000600196 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
TGFB1-204ENST00000600196 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
TGFB1-204ENST00000600196 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
TGFB1-204ENST00000600196 MED1Q15648 1581 aaPredicted RBP16.72■□□□□ 0.27
TGFB1-204ENST00000600196 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
TGFB1-204ENST00000600196 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
TGFB1-204ENST00000600196 NME9Q86XW9 330 aa16.72■□□□□ 0.27
TGFB1-204ENST00000600196 KIF24Q5T7B8 1368 aa16.72■□□□□ 0.27
TGFB1-204ENST00000600196 COL22A1Q8NFW1 1626 aaPredicted RBP16.71■□□□□ 0.27
TGFB1-204ENST00000600196 GCP02774 474 aa16.7■□□□□ 0.26
TGFB1-204ENST00000600196 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
TGFB1-204ENST00000600196 LMOD2Q6P5Q4 547 aa16.69■□□□□ 0.26
TGFB1-204ENST00000600196 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
TGFB1-204ENST00000600196 CPDO75976 1380 aa16.68■□□□□ 0.26
TGFB1-204ENST00000600196 SLIT3O75094 1523 aa16.68■□□□□ 0.26
TGFB1-204ENST00000600196 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
TGFB1-204ENST00000600196 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
TGFB1-204ENST00000600196 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
TGFB1-204ENST00000600196 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
TGFB1-204ENST00000600196 ANP32CO43423 234 aa16.66■□□□□ 0.26
TGFB1-204ENST00000600196 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
TGFB1-204ENST00000600196 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
TGFB1-204ENST00000600196 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
TGFB1-204ENST00000600196 ABCC6O95255 1503 aa16.65■□□□□ 0.26
TGFB1-204ENST00000600196 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.25
TGFB1-204ENST00000600196 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
TGFB1-204ENST00000600196 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
TGFB1-204ENST00000600196 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
TGFB1-204ENST00000600196 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
TGFB1-204ENST00000600196 INSRP06213 1382 aa16.62■□□□□ 0.25
TGFB1-204ENST00000600196 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
TGFB1-204ENST00000600196 NFAT5O94916 1531 aa16.6■□□□□ 0.25
TGFB1-204ENST00000600196 IP6K1Q92551 441 aa16.6■□□□□ 0.25
TGFB1-204ENST00000600196 POLKQ9UBT6 870 aa16.6■□□□□ 0.25
TGFB1-204ENST00000600196 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
TGFB1-204ENST00000600196 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
TGFB1-204ENST00000600196 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
TGFB1-204ENST00000600196 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
TGFB1-204ENST00000600196 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
TGFB1-204ENST00000600196 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
TGFB1-204ENST00000600196 CABLES1Q8TDN4 633 aa16.58■□□□□ 0.24
TGFB1-204ENST00000600196 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
TGFB1-204ENST00000600196 FLT4P35916 1363 aa16.57■□□□□ 0.24
TGFB1-204ENST00000600196 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
TGFB1-204ENST00000600196 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
TGFB1-204ENST00000600196 PRDM11Q9NQV5 511 aa16.57■□□□□ 0.24
TGFB1-204ENST00000600196 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
TGFB1-204ENST00000600196 AMPHP49418 695 aa16.56■□□□□ 0.24
TGFB1-204ENST00000600196 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
TGFB1-204ENST00000600196 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
TGFB1-204ENST00000600196 MTHFSP49914 203 aa16.55■□□□□ 0.24
TGFB1-204ENST00000600196 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
TGFB1-204ENST00000600196 HOXC9P31274 260 aa16.54■□□□□ 0.24
TGFB1-204ENST00000600196 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
TGFB1-204ENST00000600196 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
TGFB1-204ENST00000600196 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
TGFB1-204ENST00000600196 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
TGFB1-204ENST00000600196 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
TGFB1-204ENST00000600196 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
TGFB1-204ENST00000600196 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
TGFB1-204ENST00000600196 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
TGFB1-204ENST00000600196 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
TGFB1-204ENST00000600196 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
TGFB1-204ENST00000600196 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
TGFB1-204ENST00000600196 NGLY1Q96IV0 654 aa16.51■□□□□ 0.23
TGFB1-204ENST00000600196 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
TGFB1-204ENST00000600196 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
TGFB1-204ENST00000600196 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms