RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-216ENST00000598587 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
ARHGEF1-216ENST00000598587 TESK2Q96S53 571 aa16.89■□□□□ 0.29
ARHGEF1-216ENST00000598587 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
ARHGEF1-216ENST00000598587 USP6P35125 1406 aa16.88■□□□□ 0.29
ARHGEF1-216ENST00000598587 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.297e-7■■■■□ 19.5
ARHGEF1-216ENST00000598587 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
ARHGEF1-216ENST00000598587 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
ARHGEF1-216ENST00000598587 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
ARHGEF1-216ENST00000598587 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
ARHGEF1-216ENST00000598587 MYOM1P52179 1685 aa16.86■□□□□ 0.29
ARHGEF1-216ENST00000598587 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
ARHGEF1-216ENST00000598587 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
ARHGEF1-216ENST00000598587 USP54Q70EL1 1684 aa16.83■□□□□ 0.28
ARHGEF1-216ENST00000598587 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
ARHGEF1-216ENST00000598587 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
ARHGEF1-216ENST00000598587 NGLY1Q96IV0 654 aa16.82■□□□□ 0.28
ARHGEF1-216ENST00000598587 AFF2P51816 1311 aa16.81■□□□□ 0.28
ARHGEF1-216ENST00000598587 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
ARHGEF1-216ENST00000598587 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
ARHGEF1-216ENST00000598587 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
ARHGEF1-216ENST00000598587 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
ARHGEF1-216ENST00000598587 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
ARHGEF1-216ENST00000598587 SSH2Q76I76 1423 aa16.79■□□□□ 0.28
ARHGEF1-216ENST00000598587 PLEKHG5O94827 1062 aa16.79■□□□□ 0.28
ARHGEF1-216ENST00000598587 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
ARHGEF1-216ENST00000598587 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
ARHGEF1-216ENST00000598587 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
ARHGEF1-216ENST00000598587 SLIT3O75094 1523 aa16.78■□□□□ 0.28
ARHGEF1-216ENST00000598587 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
ARHGEF1-216ENST00000598587 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
ARHGEF1-216ENST00000598587 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
ARHGEF1-216ENST00000598587 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF1-216ENST00000598587 USP19O94966 1318 aa16.76■□□□□ 0.27
ARHGEF1-216ENST00000598587 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
ARHGEF1-216ENST00000598587 SLIT2O94813 1529 aa16.75■□□□□ 0.27
ARHGEF1-216ENST00000598587 NLRP6P59044 892 aa16.75■□□□□ 0.27
ARHGEF1-216ENST00000598587 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
ARHGEF1-216ENST00000598587 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF1-216ENST00000598587 USP21Q9UK80 565 aa16.75■□□□□ 0.27
ARHGEF1-216ENST00000598587 LTN1O94822 1766 aa16.74■□□□□ 0.27
ARHGEF1-216ENST00000598587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.27
ARHGEF1-216ENST00000598587 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
ARHGEF1-216ENST00000598587 TRPC5Q9UL62 973 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF1-216ENST00000598587 BCL9LQ86UU0 1499 aa16.72■□□□□ 0.27
ARHGEF1-216ENST00000598587 POTEAQ6S8J7 498 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 CPDO75976 1380 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
ARHGEF1-216ENST00000598587 ATRNO75882 1429 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 RXRBP28702 533 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 ABCC6O95255 1503 aa16.7■□□□□ 0.26
ARHGEF1-216ENST00000598587 GCP02774 474 aa16.69■□□□□ 0.26
ARHGEF1-216ENST00000598587 NFAT5O94916 1531 aa16.69■□□□□ 0.26
ARHGEF1-216ENST00000598587 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-216ENST00000598587 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
ARHGEF1-216ENST00000598587 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
ARHGEF1-216ENST00000598587 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
ARHGEF1-216ENST00000598587 FAM83GA6ND36 823 aa16.67■□□□□ 0.26
ARHGEF1-216ENST00000598587 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
ARHGEF1-216ENST00000598587 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
ARHGEF1-216ENST00000598587 NME9Q86XW9 330 aa16.66■□□□□ 0.26
ARHGEF1-216ENST00000598587 NSD3Q9BZ95 1437 aa16.66■□□□□ 0.26
ARHGEF1-216ENST00000598587 BTG4Q9NY30 223 aa16.66■□□□□ 0.26
ARHGEF1-216ENST00000598587 COL18A1P39060 1754 aa16.66■□□□□ 0.26
ARHGEF1-216ENST00000598587 GLI3P10071 1580 aa16.65■□□□□ 0.26
ARHGEF1-216ENST00000598587 COG3Q96JB2 828 aa16.65■□□□□ 0.26
ARHGEF1-216ENST00000598587 VPS72Q15906 364 aa16.64■□□□□ 0.25
ARHGEF1-216ENST00000598587 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
ARHGEF1-216ENST00000598587 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
ARHGEF1-216ENST00000598587 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
ARHGEF1-216ENST00000598587 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF1-216ENST00000598587 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
ARHGEF1-216ENST00000598587 AATKQ6ZMQ8 1374 aa16.63■□□□□ 0.25
ARHGEF1-216ENST00000598587 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 SOX12O15370 315 aa16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 KIF7Q2M1P5 1343 aa16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 RGS12O14924 1447 aa16.62■□□□□ 0.25
ARHGEF1-216ENST00000598587 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF1-216ENST00000598587 WNK3Q9BYP7 1800 aa16.61■□□□□ 0.25
ARHGEF1-216ENST00000598587 EVA1CP58658 441 aa16.61■□□□□ 0.25
ARHGEF1-216ENST00000598587 ZRANB1Q9UGI0 708 aa16.6■□□□□ 0.25
ARHGEF1-216ENST00000598587 BRWD3Q6RI45 1802 aa16.6■□□□□ 0.25
ARHGEF1-216ENST00000598587 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms